| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is glsA1
Identifier: 18309573
GI number: 18309573
Start: 733374
End: 734297
Strand: Direct
Name: glsA1
Synonym: CPE0591
Alternate gene names: 18309573
Gene position: 733374-734297 (Clockwise)
Preceding gene: 18309572
Following gene: 18309574
Centisome position: 24.19
GC content: 29.0
Gene sequence:
>924_bases ATGGATATAAATTTAGATGCTTTAGTAGAAGCTAATAGAAGATATACAAAAGAAGGACATGTAGCTACATATATTCCAGC CCTTGCAAAGGTAAATCCAGATCAATTAGGTGTTTGTATTTATGATTTAAAAGAAAATAAAGAATTTTCAGCTGGAGAAT ATGATGTTAGGTTTGCAATTGAAAGCATATCAAAGGTTCCTACATTAATATTAGCTATATTAGATAATGGAATAGAAAAA GTATTTTCAGAAGTTGGAACAGAACCTTCTGGATTTGCTTTTAATTCAATTATGAATATGCAAATAAATCATAAAAATAA ACCATCAAACCCATTTATTAATGCAGGAGCTATTAAAGTAGTATCCTTACTTAAAGGGAAAAATGATGAAGAACGTTTTA AAAGAATTTTAGATTTTTATAGAAAGATTATGAATGATGATGAAATTACTTTAGATACTGAAATATATTTATCAGAAAGA GAAACAGGTGATATAAACAGATCTCTTGCTTATTATATGAAGGGTAATGGAATCATGGAAGGTGATGTTACTGATATTTT AGATTCATATTTTAAACAATGTTCAGTTTTAGTTACAGCTAAGGATTTAGCAAGATTAGGTGCTGTATTAGCTAATGAAG GGGTTATGCCTTGGAATGGTGAAAGATTATTTTCTGTAGAAACAGCTACTGTTGTTAAATCATTAATGACTACTTACGGA TTATATGATGAATCAGGAGCTTTTTCAGTTCATATTGGACTACCATCTAAAAGTGGTGTAGGAGGAGGAATATTATCTTC AGTTCCTAATAAATGTGGTATAGGATTATTTAGTCCAGCTTTAGATGTATCAGGAAATAGTGTTGCTAGTATGAAACTTC TAAAGGAAATAGCAGATAAATTAAAATTAGATATATTTAGATAG
Upstream 100 bases:
>100_bases ACCTATAGAAAAATTATATGAAGTAAAATTTTTGAGTTTTGATTTTGAAATTATTAACTGTTTATAATATTTTTAGAAGA TAAATTTAGAGGTGATTTAT
Downstream 100 bases:
>100_bases AAGTTTTTAAATAAGTAAATTAGGTTTAAGTATGTTTAGAGTGATTAAAAATCTAAATATATTTAAGCCTATATTTTTTA TTTTAACAACTATTTTATGG
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MDINLDALVEANRRYTKEGHVATYIPALAKVNPDQLGVCIYDLKENKEFSAGEYDVRFAIESISKVPTLILAILDNGIEK VFSEVGTEPSGFAFNSIMNMQINHKNKPSNPFINAGAIKVVSLLKGKNDEERFKRILDFYRKIMNDDEITLDTEIYLSER ETGDINRSLAYYMKGNGIMEGDVTDILDSYFKQCSVLVTAKDLARLGAVLANEGVMPWNGERLFSVETATVVKSLMTTYG LYDESGAFSVHIGLPSKSGVGGGILSSVPNKCGIGLFSPALDVSGNSVASMKLLKEIADKLKLDIFR
Sequences:
>Translated_307_residues MDINLDALVEANRRYTKEGHVATYIPALAKVNPDQLGVCIYDLKENKEFSAGEYDVRFAIESISKVPTLILAILDNGIEK VFSEVGTEPSGFAFNSIMNMQINHKNKPSNPFINAGAIKVVSLLKGKNDEERFKRILDFYRKIMNDDEITLDTEIYLSER ETGDINRSLAYYMKGNGIMEGDVTDILDSYFKQCSVLVTAKDLARLGAVLANEGVMPWNGERLFSVETATVVKSLMTTYG LYDESGAFSVHIGLPSKSGVGGGILSSVPNKCGIGLFSPALDVSGNSVASMKLLKEIADKLKLDIFR >Mature_307_residues MDINLDALVEANRRYTKEGHVATYIPALAKVNPDQLGVCIYDLKENKEFSAGEYDVRFAIESISKVPTLILAILDNGIEK VFSEVGTEPSGFAFNSIMNMQINHKNKPSNPFINAGAIKVVSLLKGKNDEERFKRILDFYRKIMNDDEITLDTEIYLSER ETGDINRSLAYYMKGNGIMEGDVTDILDSYFKQCSVLVTAKDLARLGAVLANEGVMPWNGERLFSVETATVVKSLMTTYG LYDESGAFSVHIGLPSKSGVGGGILSSVPNKCGIGLFSPALDVSGNSVASMKLLKEIADKLKLDIFR
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family
Homologues:
Organism=Homo sapiens, GI156104878, Length=297, Percent_Identity=40.7407407407407, Blast_Score=211, Evalue=9e-55, Organism=Homo sapiens, GI20336214, Length=272, Percent_Identity=39.7058823529412, Blast_Score=184, Evalue=9e-47, Organism=Escherichia coli, GI1786693, Length=289, Percent_Identity=40.1384083044983, Blast_Score=215, Evalue=3e-57, Organism=Escherichia coli, GI1787804, Length=302, Percent_Identity=36.7549668874172, Blast_Score=204, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17507019, Length=290, Percent_Identity=41.0344827586207, Blast_Score=210, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17532727, Length=285, Percent_Identity=41.7543859649123, Blast_Score=205, Evalue=2e-53, Organism=Caenorhabditis elegans, GI193204073, Length=298, Percent_Identity=36.5771812080537, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI193204075, Length=300, Percent_Identity=36, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI24653164, Length=286, Percent_Identity=37.0629370629371, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24653158, Length=286, Percent_Identity=37.0629370629371, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24653162, Length=286, Percent_Identity=37.0629370629371, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI281363239, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=5e-48, Organism=Drosophila melanogaster, GI116008307, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24653156, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI281363241, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24653166, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLSA1_CLOPE (Q8XMU7)
Other databases:
- EMBL: BA000016 - RefSeq: NP_561507.1 - ProteinModelPortal: Q8XMU7 - SMR: Q8XMU7 - GeneID: 988845 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE0591 - NMPDR: fig|195102.1.peg.654 - HOGENOM: HBG512335 - OMA: YLSERET - PhylomeDB: Q8XMU7 - ProtClustDB: CLSK518681 - BioCyc: CPER195102:CPE0591-MONOMER - BRENDA: 3.5.1.2 - HAMAP: MF_00313 - InterPro: IPR012338 - InterPro: IPR015868 - Gene3D: G3DSA:3.40.710.20 - PANTHER: PTHR12544 - TIGRFAMs: TIGR03814
Pfam domain/function: PF04960 Glutaminase; SSF56601 PBP_transp_fold
EC number: =3.5.1.2
Molecular weight: Translated: 33731; Mature: 33731
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINLDALVEANRRYTKEGHVATYIPALAKVNPDQLGVCIYDLKENKEFSAGEYDVRFAI CCCCHHHHHHCCHHCCCCCCCHHHHHHHHCCCHHHHCEEEEEECCCCCCCCCCCHHHHHH ESISKVPTLILAILDNGIEKVFSEVGTEPSGFAFNSIMNMQINHKNKPSNPFINAGAIKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHEEEEEEECCCCCCCCCCCCHHHHH VSLLKGKNDEERFKRILDFYRKIMNDDEITLDTEIYLSERETGDINRSLAYYMKGNGIME HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCEEC GDVTDILDSYFKQCSVLVTAKDLARLGAVLANEGVMPWNGERLFSVETATVVKSLMTTYG CCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHC LYDESGAFSVHIGLPSKSGVGGGILSSVPNKCGIGLFSPALDVSGNSVASMKLLKEIADK CCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LKLDIFR HHCCCCC >Mature Secondary Structure MDINLDALVEANRRYTKEGHVATYIPALAKVNPDQLGVCIYDLKENKEFSAGEYDVRFAI CCCCHHHHHHCCHHCCCCCCCHHHHHHHHCCCHHHHCEEEEEECCCCCCCCCCCHHHHHH ESISKVPTLILAILDNGIEKVFSEVGTEPSGFAFNSIMNMQINHKNKPSNPFINAGAIKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHEEEEEEECCCCCCCCCCCCHHHHH VSLLKGKNDEERFKRILDFYRKIMNDDEITLDTEIYLSERETGDINRSLAYYMKGNGIME HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCEEC GDVTDILDSYFKQCSVLVTAKDLARLGAVLANEGVMPWNGERLFSVETATVVKSLMTTYG CCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHC LYDESGAFSVHIGLPSKSGVGGGILSSVPNKCGIGLFSPALDVSGNSVASMKLLKEIADK CCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LKLDIFR HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842