| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681548
Identifier: 182681548
GI number: 182681548
Start: 1160492
End: 1160812
Strand: Reverse
Name: 182681548
Synonym: XfasM23_1003
Alternate gene names: NA
Gene position: 1160812-1160492 (Counterclockwise)
Preceding gene: 182681549
Following gene: 182681547
Centisome position: 45.78
GC content: 52.02
Gene sequence:
>321_bases ATGCGTGAACTCAACGTTGCAGAGCTTTCGTTAGTGGCTGGTGCTGGTGCTCCTGAGCATAGCTGGTGGGACGATTTTAA AAACTGGGTAAGTCAGAACTCTATGCAGGCCAGTATCAGTCCTGGTGGAGGAGGGGGAGGAGGGGGAACAGCTAACATTT ACGATGCTATGATCGCATGTACTAACCAAGGTGGATCATTCCAAGGAAGTTCGTTTAATACCTCAGTATCTGCTGGTGTT GGTGGGCGTCCGGGAGCTTCGGCTAGCGTAAACATCGGCTATTCCAGCGGATCGTGCATAATGCCGCAGCGGCGTCACTG A
Upstream 100 bases:
>100_bases CACTTGACATCTATAGTTCTAATGAGAGTTATAGGCTCATTAGATCACCATAGAGGGCGAACTCAAGTAAAAAACCCTTA ACACATATGGAGTTGTGACA
Downstream 100 bases:
>100_bases GAGCACAGCGTAACGTCAGCTTTGTTTTTAACCTGAGTGGCAAGCCACTCAGGTCATTTCAGATAGATATTCTGAGACAG ATAAAAGTGCGATGGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRELNVAELSLVAGAGAPEHSWWDDFKNWVSQNSMQASISPGGGGGGGGTANIYDAMIACTNQGGSFQGSSFNTSVSAGV GGRPGASASVNIGYSSGSCIMPQRRH
Sequences:
>Translated_106_residues MRELNVAELSLVAGAGAPEHSWWDDFKNWVSQNSMQASISPGGGGGGGGTANIYDAMIACTNQGGSFQGSSFNTSVSAGV GGRPGASASVNIGYSSGSCIMPQRRH >Mature_106_residues MRELNVAELSLVAGAGAPEHSWWDDFKNWVSQNSMQASISPGGGGGGGGTANIYDAMIACTNQGGSFQGSSFNTSVSAGV GGRPGASASVNIGYSSGSCIMPQRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10726; Mature: 10726
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELNVAELSLVAGAGAPEHSWWDDFKNWVSQNSMQASISPGGGGGGGGTANIYDAMIAC CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEE TNQGGSFQGSSFNTSVSAGVGGRPGASASVNIGYSSGSCIMPQRRH ECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRELNVAELSLVAGAGAPEHSWWDDFKNWVSQNSMQASISPGGGGGGGGTANIYDAMIAC CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEEEE TNQGGSFQGSSFNTSVSAGVGGRPGASASVNIGYSSGSCIMPQRRH ECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA