| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681549
Identifier: 182681549
GI number: 182681549
Start: 1161601
End: 1164330
Strand: Reverse
Name: 182681549
Synonym: XfasM23_1004
Alternate gene names: NA
Gene position: 1164330-1161601 (Counterclockwise)
Preceding gene: 182681551
Following gene: 182681548
Centisome position: 45.92
GC content: 54.69
Gene sequence:
>2730_bases TTGCCCCCACTGCAACCATCATTAGCTGCGAAGATCGGGCGGCATCTTGAATTGACTAATACAGAAGCCGCGCATGCGCT TGGTTTGACGGGCAGTGGCTTTATTATTGGTATGGTTGACACCGGCGTGAATCGTAACAATATTGCGTTACAGGGGAAGG TGATTCGCAACGGTGTCTATAATTTCTATACGGATTATCACGCCCCCTCGGCTCCGGACGATGTTGACGATCATGGCACC TTAGTGGCGCAGCTAATTGCTGGTAAACCGGTTGAACACTGGCCTGGTGGCATCGCACCAGGTGCCTCCATCTTCTCAGC GCGTGTTTACCCGTCTGAAGAAGAATTTGAAGCATACATCGAAGAACAAATGGCATCCTCACACATCGTGGATACTTATG AAGCAGAAGCATCGAAGATAAAGCTTATTAATGCTGACATGATTGCTGCGGGAGTGCGCATCCAAAACAACTCATGGGGC CATTCGAGGGCTGGAATGTGGACAGATCCAAAGATCACGAATTTGTTCGCGGACACATACCGTGACTTTGTGATCGGCAA CAATGGTTTGGTGGTATTCAGCACTGGTAACGAAAAGCTATCACAACCAAACGGACTTGCCAGACTGCCGAGCTTGCTTA CGGCGGAGGGCTCCCCATTGGCCGCCGATCTGGAAAAGGGATGGTTAGCCGTCGCTGGACTGGACAGTTTTGATCACCCC GACCAGTTGGGTTCCTACTCCAATCACTGTGGTGTTGCAATGCACTATTGCTTGGCAGCCCCAGGTAATGTCCTAGTCAT TGATTCCAACGTGACTACCACCCCTATTGGCAATGATGAATACAAAGAACAACGCGGCACGTCCTTTTCAGCGCCTTTGG TATCTGGTGCAGCGGCCTTGGTGTGGGAGGCATATCCATACTTCACCAATGACCTAGTGCGTCAGACATTGCTTGGGACG GCCACCGATCTTGGTGCTCCTGGTGTGGACGAAGTATTCGGGTATGGCGCCCTGAATGTGGGCAAAGCGGTGCGTGGGCC CGCCAAGTTTGATTGGGGCGATGTTAAAGTCAGCTTCAATGACAGCCGTTCGACCTGGTTCAATGATATTAGCGGCGGCG GTGGTTTGATCAAAGACGGTACAGGAACCTTGGTGCTTGCTGGCAGCGCCAACCAATATAGTGGAGCGATCCAAGTGCTT GGAGGCACACTCCAGGTAAGCAGCCTAGGTGAGTCGGCGGTGAGCATTGCCCACAGTGCGACCTTGATTGGCAGTGGTCG CTTTGGTGGTGCAGTGAGCAATGCAGGCACCTTAGAGATTGGTACAGATGGCCTAAAGGTTCAAGGCGATTACACCCAGT CTGAGACAGGGCGTCTTGCGTTGAACGTGGGTGATCAACTGAGCGTTGCAGGCCATGCCACCCTCCAAGGGGGTGAACTT CAGGTGCTGGGCAAGCGCGATTATGTGAGCTTGAATACCTCCTACAGCGTGTTACATGCGGATGGTGGTTTGACCGGGAC GTTCTCGGGGTTGACCTGGGGTCCGGCGGTGCTGCTGGGAGAAGGTCAGCTTCACTACGGTGCCAACGATGCTAACGTGA CCCTGCAGCGCCTGGACGTCAATGCGGCGGCTCGTGCATTGGGGATTGTTGATACTGTTGCGCAGGCTTCTGCCCGACGA GTTGAGCAAGCGTTCCGTGAAATTGACATTCAGCAGGCCCAAGGCCGCGGTCAGTTATCGACTTCCTTTATGGCGGCGGC GGCGGCCCTGCAACAGTCTGGGAGCGCACAAATGGCATCGGCTTCGCTGCATAGTTTGTCCGGTCAAGGGCATGTTGCGG CAACGGCGTCCAGCTTTGATGTTGTTGATGCGGGACGACGCAGCCTTGCCACCCGTCTGGGTGAGCGCCCATTGGGCGAA CGTACGGTGACGTGGCGTCAGTCATTGGGTGGTTCTGGTCATGATGGGACTGCTGGAGGCACATTTGCACTGTCTGGCTG GTTGCTTGGGCGCGATACACAACTGGCCTCTGGCGACATTGTGGGTTTTGCTTTTGGTCAGTCTGAGGCCAGTCCATCCG GCAGCGTGTCAGGGCTACGTGGTCTTGACAGACAAGTGCAAGGGCGTATGTATGTACAGCGTAGCCAAGGCCCCTTGTAT GTATTGGGTCAGCTTGGTTTTGGCAGTTTTCAACGCCGTCTGGACCGGCAGTTGCAATTGGGTCATTGGAGTGACTGGGC AAGCAGTCGCTACCGTGGTCAATTTTTCAGTGGGAGTGTAGAGGCTGGGTATCATTGGCGCCGTGGTGCATGGGCCTTGA CGCCGTATGTGGGTGTAGATCAAACGCAGCTGAAGACGGATGGATTCCGTGAGCAGGGAGGGGCGGGCTTTGGCTTACAG GTACAGGCGTCCCAAGCTATTCGGAGCCAGTTACTGGCTGGTGTTCGTACTGAATTAGGGTGGCGTGGAGTGAAGCTACG TGGCTATGGTGAGTGGCAGCAGACCTTGCGTCAGAGTGGGTTGAATCCACAGGCTAGCTTTACGGCGACATCGTCATGGA CGCCCTTGGTGGCATCCCCCTGGTCTAGTCGTTCTGGCGGACTTCTTGGCTTATCAATGGTCTGGCCCGTGGGGATGACG GCAGGAGAGTGGAGCATGGGTGTAGAACACTTCTTTGGTGCCCGTAAACGCAGTGATAGCTTGGGTTTGCGTTATCAGCT GAGTTTCTAG
Upstream 100 bases:
>100_bases TACACCCACACCTACACCCACACCTACACCCACACCTACACCCACACCCACACCCACACCTACACCCACACCTACACCCA CACCTACACCTACACCCACA
Downstream 100 bases:
>100_bases TCTGAGTATGGAAGCCGATGCACGGTAGTGCCGTGCATCGGCGGTGTTTAGTAATGCGTGTGCTAGACAGAGCTGTACAT TGCGTGCCTCGCGTGCGAGT
Product: beta strand repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 909; Mature: 908
Protein sequence:
>909_residues MPPLQPSLAAKIGRHLELTNTEAAHALGLTGSGFIIGMVDTGVNRNNIALQGKVIRNGVYNFYTDYHAPSAPDDVDDHGT LVAQLIAGKPVEHWPGGIAPGASIFSARVYPSEEEFEAYIEEQMASSHIVDTYEAEASKIKLINADMIAAGVRIQNNSWG HSRAGMWTDPKITNLFADTYRDFVIGNNGLVVFSTGNEKLSQPNGLARLPSLLTAEGSPLAADLEKGWLAVAGLDSFDHP DQLGSYSNHCGVAMHYCLAAPGNVLVIDSNVTTTPIGNDEYKEQRGTSFSAPLVSGAAALVWEAYPYFTNDLVRQTLLGT ATDLGAPGVDEVFGYGALNVGKAVRGPAKFDWGDVKVSFNDSRSTWFNDISGGGGLIKDGTGTLVLAGSANQYSGAIQVL GGTLQVSSLGESAVSIAHSATLIGSGRFGGAVSNAGTLEIGTDGLKVQGDYTQSETGRLALNVGDQLSVAGHATLQGGEL QVLGKRDYVSLNTSYSVLHADGGLTGTFSGLTWGPAVLLGEGQLHYGANDANVTLQRLDVNAAARALGIVDTVAQASARR VEQAFREIDIQQAQGRGQLSTSFMAAAAALQQSGSAQMASASLHSLSGQGHVAATASSFDVVDAGRRSLATRLGERPLGE RTVTWRQSLGGSGHDGTAGGTFALSGWLLGRDTQLASGDIVGFAFGQSEASPSGSVSGLRGLDRQVQGRMYVQRSQGPLY VLGQLGFGSFQRRLDRQLQLGHWSDWASSRYRGQFFSGSVEAGYHWRRGAWALTPYVGVDQTQLKTDGFREQGGAGFGLQ VQASQAIRSQLLAGVRTELGWRGVKLRGYGEWQQTLRQSGLNPQASFTATSSWTPLVASPWSSRSGGLLGLSMVWPVGMT AGEWSMGVEHFFGARKRSDSLGLRYQLSF
Sequences:
>Translated_909_residues MPPLQPSLAAKIGRHLELTNTEAAHALGLTGSGFIIGMVDTGVNRNNIALQGKVIRNGVYNFYTDYHAPSAPDDVDDHGT LVAQLIAGKPVEHWPGGIAPGASIFSARVYPSEEEFEAYIEEQMASSHIVDTYEAEASKIKLINADMIAAGVRIQNNSWG HSRAGMWTDPKITNLFADTYRDFVIGNNGLVVFSTGNEKLSQPNGLARLPSLLTAEGSPLAADLEKGWLAVAGLDSFDHP DQLGSYSNHCGVAMHYCLAAPGNVLVIDSNVTTTPIGNDEYKEQRGTSFSAPLVSGAAALVWEAYPYFTNDLVRQTLLGT ATDLGAPGVDEVFGYGALNVGKAVRGPAKFDWGDVKVSFNDSRSTWFNDISGGGGLIKDGTGTLVLAGSANQYSGAIQVL GGTLQVSSLGESAVSIAHSATLIGSGRFGGAVSNAGTLEIGTDGLKVQGDYTQSETGRLALNVGDQLSVAGHATLQGGEL QVLGKRDYVSLNTSYSVLHADGGLTGTFSGLTWGPAVLLGEGQLHYGANDANVTLQRLDVNAAARALGIVDTVAQASARR VEQAFREIDIQQAQGRGQLSTSFMAAAAALQQSGSAQMASASLHSLSGQGHVAATASSFDVVDAGRRSLATRLGERPLGE RTVTWRQSLGGSGHDGTAGGTFALSGWLLGRDTQLASGDIVGFAFGQSEASPSGSVSGLRGLDRQVQGRMYVQRSQGPLY VLGQLGFGSFQRRLDRQLQLGHWSDWASSRYRGQFFSGSVEAGYHWRRGAWALTPYVGVDQTQLKTDGFREQGGAGFGLQ VQASQAIRSQLLAGVRTELGWRGVKLRGYGEWQQTLRQSGLNPQASFTATSSWTPLVASPWSSRSGGLLGLSMVWPVGMT AGEWSMGVEHFFGARKRSDSLGLRYQLSF >Mature_908_residues PPLQPSLAAKIGRHLELTNTEAAHALGLTGSGFIIGMVDTGVNRNNIALQGKVIRNGVYNFYTDYHAPSAPDDVDDHGTL VAQLIAGKPVEHWPGGIAPGASIFSARVYPSEEEFEAYIEEQMASSHIVDTYEAEASKIKLINADMIAAGVRIQNNSWGH SRAGMWTDPKITNLFADTYRDFVIGNNGLVVFSTGNEKLSQPNGLARLPSLLTAEGSPLAADLEKGWLAVAGLDSFDHPD QLGSYSNHCGVAMHYCLAAPGNVLVIDSNVTTTPIGNDEYKEQRGTSFSAPLVSGAAALVWEAYPYFTNDLVRQTLLGTA TDLGAPGVDEVFGYGALNVGKAVRGPAKFDWGDVKVSFNDSRSTWFNDISGGGGLIKDGTGTLVLAGSANQYSGAIQVLG GTLQVSSLGESAVSIAHSATLIGSGRFGGAVSNAGTLEIGTDGLKVQGDYTQSETGRLALNVGDQLSVAGHATLQGGELQ VLGKRDYVSLNTSYSVLHADGGLTGTFSGLTWGPAVLLGEGQLHYGANDANVTLQRLDVNAAARALGIVDTVAQASARRV EQAFREIDIQQAQGRGQLSTSFMAAAAALQQSGSAQMASASLHSLSGQGHVAATASSFDVVDAGRRSLATRLGERPLGER TVTWRQSLGGSGHDGTAGGTFALSGWLLGRDTQLASGDIVGFAFGQSEASPSGSVSGLRGLDRQVQGRMYVQRSQGPLYV LGQLGFGSFQRRLDRQLQLGHWSDWASSRYRGQFFSGSVEAGYHWRRGAWALTPYVGVDQTQLKTDGFREQGGAGFGLQV QASQAIRSQLLAGVRTELGWRGVKLRGYGEWQQTLRQSGLNPQASFTATSSWTPLVASPWSSRSGGLLGLSMVWPVGMTA GEWSMGVEHFFGARKRSDSLGLRYQLSF
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S8 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR011050 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 96067; Mature: 95936
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLQPSLAAKIGRHLELTNTEAAHALGLTGSGFIIGMVDTGVNRNNIALQGKVIRNGVY CCCCCHHHHHHHCCCEEECCCCHHHEECCCCCCEEEEEEECCCCCCCEEEEEEHHHCCCH NFYTDYHAPSAPDDVDDHGTLVAQLIAGKPVEHWPGGIAPGASIFSARVYPSEEEFEAYI HEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCHHEEEECCCCHHHHHHHH EEQMASSHIVDTYEAEASKIKLINADMIAAGVRIQNNSWGHSRAGMWTDPKITNLFADTY HHHHHHHCCCCCCCCCCCEEEEEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHH RDFVIGNNGLVVFSTGNEKLSQPNGLARLPSLLTAEGSPLAADLEKGWLAVAGLDSFDHP HHEEECCCCEEEEECCCHHCCCCCCHHHCCHHHCCCCCCCEEHHCCCEEEEECCCCCCCC DQLGSYSNHCGVAMHYCLAAPGNVLVIDSNVTTTPIGNDEYKEQRGTSFSAPLVSGAAAL HHHCCCCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHHCCCCCCCHHHHCCCEE VWEAYPYFTNDLVRQTLLGTATDLGAPGVDEVFGYGALNVGKAVRGPAKFDWGDVKVSFN EHCCCCHHHHHHHHHHHHHCHHCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEC DSRSTWFNDISGGGGLIKDGTGTLVLAGSANQYSGAIQVLGGTLQVSSLGESAVSIAHSA CCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCEEEECCCCHHHHHHHHHE TLIGSGRFGGAVSNAGTLEIGTDGLKVQGDYTQSETGRLALNVGDQLSVAGHATLQGGEL EEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCEEECEEEEECCCEE QVLGKRDYVSLNTSYSVLHADGGLTGTFSGLTWGPAVLLGEGQLHYGANDANVTLQRLDV EEEECCCEEEECCCEEEEEECCCCEEECCCCCCCCEEEEECCEEEECCCCCCEEEEEECC NAAARALGIVDTVAQASARRVEQAFREIDIQQAQGRGQLSTSFMAAAAALQQSGSAQMAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHH ASLHSLSGQGHVAATASSFDVVDAGRRSLATRLGERPLGERTVTWRQSLGGSGHDGTAGG HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCC TFALSGWLLGRDTQLASGDIVGFAFGQSEASPSGSVSGLRGLDRQVQGRMYVQRSQGPLY EEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEE VLGQLGFGSFQRRLDRQLQLGHWSDWASSRYRGQFFSGSVEAGYHWRRGAWALTPYVGVD EEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCCCCCCEEECCCEEECCCCCCC QTQLKTDGFREQGGAGFGLQVQASQAIRSQLLAGVRTELGWRGVKLRGYGEWQQTLRQSG CHHCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCC LNPQASFTATSSWTPLVASPWSSRSGGLLGLSMVWPVGMTAGEWSMGVEHFFGARKRSDS CCCCCCEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCHHHHHCCCCCCCC LGLRYQLSF CCEEEEECC >Mature Secondary Structure PPLQPSLAAKIGRHLELTNTEAAHALGLTGSGFIIGMVDTGVNRNNIALQGKVIRNGVY CCCCHHHHHHHCCCEEECCCCHHHEECCCCCCEEEEEEECCCCCCCEEEEEEHHHCCCH NFYTDYHAPSAPDDVDDHGTLVAQLIAGKPVEHWPGGIAPGASIFSARVYPSEEEFEAYI HEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCHHEEEECCCCHHHHHHHH EEQMASSHIVDTYEAEASKIKLINADMIAAGVRIQNNSWGHSRAGMWTDPKITNLFADTY HHHHHHHCCCCCCCCCCCEEEEEECCEEEECEEEECCCCCCCCCCCCCCCHHHHHHHHHH RDFVIGNNGLVVFSTGNEKLSQPNGLARLPSLLTAEGSPLAADLEKGWLAVAGLDSFDHP HHEEECCCCEEEEECCCHHCCCCCCHHHCCHHHCCCCCCCEEHHCCCEEEEECCCCCCCC DQLGSYSNHCGVAMHYCLAAPGNVLVIDSNVTTTPIGNDEYKEQRGTSFSAPLVSGAAAL HHHCCCCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHHCCCCCCCHHHHCCCEE VWEAYPYFTNDLVRQTLLGTATDLGAPGVDEVFGYGALNVGKAVRGPAKFDWGDVKVSFN EHCCCCHHHHHHHHHHHHHCHHCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEC DSRSTWFNDISGGGGLIKDGTGTLVLAGSANQYSGAIQVLGGTLQVSSLGESAVSIAHSA CCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCEEEECCCCHHHHHHHHHE TLIGSGRFGGAVSNAGTLEIGTDGLKVQGDYTQSETGRLALNVGDQLSVAGHATLQGGEL EEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCEEECEEEEECCCEE QVLGKRDYVSLNTSYSVLHADGGLTGTFSGLTWGPAVLLGEGQLHYGANDANVTLQRLDV EEEECCCEEEECCCEEEEEECCCCEEECCCCCCCCEEEEECCEEEECCCCCCEEEEEECC NAAARALGIVDTVAQASARRVEQAFREIDIQQAQGRGQLSTSFMAAAAALQQSGSAQMAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHH ASLHSLSGQGHVAATASSFDVVDAGRRSLATRLGERPLGERTVTWRQSLGGSGHDGTAGG HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCC TFALSGWLLGRDTQLASGDIVGFAFGQSEASPSGSVSGLRGLDRQVQGRMYVQRSQGPLY EEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEE VLGQLGFGSFQRRLDRQLQLGHWSDWASSRYRGQFFSGSVEAGYHWRRGAWALTPYVGVD EEEECCCCHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCCCCCCEEECCCEEECCCCCCC QTQLKTDGFREQGGAGFGLQVQASQAIRSQLLAGVRTELGWRGVKLRGYGEWQQTLRQSG CHHCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCC LNPQASFTATSSWTPLVASPWSSRSGGLLGLSMVWPVGMTAGEWSMGVEHFFGARKRSDS CCCCCCEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHCHHHHHCCCCCCCC LGLRYQLSF CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3011754; 1639760 [H]