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The map label for this gene is ctpA [H]

Identifier: 182681547

GI number: 182681547

Start: 1158727

End: 1160334

Strand: Reverse

Name: ctpA [H]

Synonym: XfasM23_1002

Alternate gene names: 182681547

Gene position: 1160334-1158727 (Counterclockwise)

Preceding gene: 182681548

Following gene: 182681546

Centisome position: 45.76

GC content: 45.71

Gene sequence:

>1608_bases
ATGACGGGACATATGCGAATAAAAACCGGAATAAAAAAAGCACTGATCCTGATGCTTTCTGTAGTGCTGGTGTCACTGGT
TGCAATCGCCGCGCATCGGTTTTATATCCGCCTTCCACAGTCCAGACTGTTTTATGCATGGAAAAAAGTGGATGAAGTGT
ATTACGACAGAACGTTTGCTGGCTTTGACTGGCCTGCCGTCTTAGCGACCTATAAAAAGCATCTGCCTCGGTTCGACTGG
GATGGGAGAGAAACCTCTCCATTTATTCACAATATGCTGTCGCTCCTTGAAGTCTCTCATTTGCGGCACATTCCAGGTTT
TATGGCTCCAGAAAAAATTAAGGAGGAAGCTGTATTAGCAAATTATTTCCCAGAACTGCGTGATATATCAGGAATGGTTC
TGGTGCAAGAAACATTATTCAAGATGTCAAAAGTACTCTCCTTAGAGACCTGGTCCCCACTGTATGCGCATGGCGTCCGT
GTGGGCGACCGTATTCTTCTAGACACACTTGATACTGATATTTCTGATAAGAATAAACCTGTGCGGCTGTATTGCTATCA
CATTAATACAGCAGGGGTAAAAAAAGAATTTGAGTTCGACCTCCCGGCACCACCTCTTGGCGCGCAACAGACTGCGGTGC
CTGCGGGGGATCATGTGCTGCACATCGCACGCTTTGCACGCTTTGATCAGGGCGAAATACAAGCGCTTAAACACGTGATC
GAGGATCGGAATTCACCGATGACCCAGTTACATTATATTCCTTTAGGGGCCGTTACTACGCGTCCTCACCTCATCAGAAC
TAAAGTCATTGATGTGGTTAAAGATTCAGAAGCCGATAAAGCAGGTGTTGAAATCGGATCCTTCATTGGGGACGGAACCG
ATCCTAAAACAGAGTCTAAAAATATAGGCGGGAAAACAGTCGTAAAAAGCAATGGTATTTATAAAATGATCCTCCCTGAT
GGTAAAAAAGTCACTTTCTCTATTAATAAAGAAATTACATTGAGTAACTTTGAAGGAATCCGTTCCGCACAGCTGATCGG
CAAAACACTGGTTATCGCATTTAATGAGATGACCGATGAAAATACCCAATGGGCATTGCAACAGATCAAAAATACCCCTG
CAACAGCGATCGTTCTGGATTTACGCGACAACACCGGAGGTTCATCCATCGCAGTACCGAAGTTATTGGCTGGATTTTTA
GCTTCTGGAACCCGCATCGCAACCGAAATACGAGGTAAAAAAACCAATGAAATAAATGTCCCTACCGGATATACACCGAC
TGATAAACCCATGGCGGTGTTAATTGGTCTAGTCTCTGCCAGTGGGGCTGAAGTGACGGCAAGAACCCTGCAATTTCACC
GCCGTGCGCGTATTTACGGCGCCCAATCCTCGGGACAGGTACTCATGTCCCGTTTTTATAAACTGACTGATGGCTCTTAT
ATACAAATTCCACATGCAAATTTACTAGATCCAGCAGGGAAGCCGCTTGAGTGGTATGGCGTCATGCCGGATGTGAAAAA
ATGGAAAACCTTAAGTGATGTGCGTGCCGGGCGTGATCCAGTGTTGGAATGCGCCTTAACGGACCTGTCCGGCGGACAAT
GTCACTAA

Upstream 100 bases:

>100_bases
TTCAGATAGATATTCTGAGACAGATAAAAGTGCGATGGCTGAGTGGACATCGTTATCTCTGCTTTGAAATTTCATTTCTC
AAAATCGTAGTCATCCATGG

Downstream 100 bases:

>100_bases
TCCTGCGCATACTGAGTACCTCCACACCCAGCTGTGATCTCACTCAATGCAGCGGTATGTAATATCGGCACTACATCTCC
GGAAGTTTATTTATTAAATA

Product: peptidase S41

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MTGHMRIKTGIKKALILMLSVVLVSLVAIAAHRFYIRLPQSRLFYAWKKVDEVYYDRTFAGFDWPAVLATYKKHLPRFDW
DGRETSPFIHNMLSLLEVSHLRHIPGFMAPEKIKEEAVLANYFPELRDISGMVLVQETLFKMSKVLSLETWSPLYAHGVR
VGDRILLDTLDTDISDKNKPVRLYCYHINTAGVKKEFEFDLPAPPLGAQQTAVPAGDHVLHIARFARFDQGEIQALKHVI
EDRNSPMTQLHYIPLGAVTTRPHLIRTKVIDVVKDSEADKAGVEIGSFIGDGTDPKTESKNIGGKTVVKSNGIYKMILPD
GKKVTFSINKEITLSNFEGIRSAQLIGKTLVIAFNEMTDENTQWALQQIKNTPATAIVLDLRDNTGGSSIAVPKLLAGFL
ASGTRIATEIRGKKTNEINVPTGYTPTDKPMAVLIGLVSASGAEVTARTLQFHRRARIYGAQSSGQVLMSRFYKLTDGSY
IQIPHANLLDPAGKPLEWYGVMPDVKKWKTLSDVRAGRDPVLECALTDLSGGQCH

Sequences:

>Translated_535_residues
MTGHMRIKTGIKKALILMLSVVLVSLVAIAAHRFYIRLPQSRLFYAWKKVDEVYYDRTFAGFDWPAVLATYKKHLPRFDW
DGRETSPFIHNMLSLLEVSHLRHIPGFMAPEKIKEEAVLANYFPELRDISGMVLVQETLFKMSKVLSLETWSPLYAHGVR
VGDRILLDTLDTDISDKNKPVRLYCYHINTAGVKKEFEFDLPAPPLGAQQTAVPAGDHVLHIARFARFDQGEIQALKHVI
EDRNSPMTQLHYIPLGAVTTRPHLIRTKVIDVVKDSEADKAGVEIGSFIGDGTDPKTESKNIGGKTVVKSNGIYKMILPD
GKKVTFSINKEITLSNFEGIRSAQLIGKTLVIAFNEMTDENTQWALQQIKNTPATAIVLDLRDNTGGSSIAVPKLLAGFL
ASGTRIATEIRGKKTNEINVPTGYTPTDKPMAVLIGLVSASGAEVTARTLQFHRRARIYGAQSSGQVLMSRFYKLTDGSY
IQIPHANLLDPAGKPLEWYGVMPDVKKWKTLSDVRAGRDPVLECALTDLSGGQCH
>Mature_534_residues
TGHMRIKTGIKKALILMLSVVLVSLVAIAAHRFYIRLPQSRLFYAWKKVDEVYYDRTFAGFDWPAVLATYKKHLPRFDWD
GRETSPFIHNMLSLLEVSHLRHIPGFMAPEKIKEEAVLANYFPELRDISGMVLVQETLFKMSKVLSLETWSPLYAHGVRV
GDRILLDTLDTDISDKNKPVRLYCYHINTAGVKKEFEFDLPAPPLGAQQTAVPAGDHVLHIARFARFDQGEIQALKHVIE
DRNSPMTQLHYIPLGAVTTRPHLIRTKVIDVVKDSEADKAGVEIGSFIGDGTDPKTESKNIGGKTVVKSNGIYKMILPDG
KKVTFSINKEITLSNFEGIRSAQLIGKTLVIAFNEMTDENTQWALQQIKNTPATAIVLDLRDNTGGSSIAVPKLLAGFLA
SGTRIATEIRGKKTNEINVPTGYTPTDKPMAVLIGLVSASGAEVTARTLQFHRRARIYGAQSSGQVLMSRFYKLTDGSYI
QIPHANLLDPAGKPLEWYGVMPDVKKWKTLSDVRAGRDPVLECALTDLSGGQCH

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 59448; Mature: 59316

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGHMRIKTGIKKALILMLSVVLVSLVAIAAHRFYIRLPQSRLFYAWKKVDEVYYDRTFA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCEEC
GFDWPAVLATYKKHLPRFDWDGRETSPFIHNMLSLLEVSHLRHIPGFMAPEKIKEEAVLA
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NYFPELRDISGMVLVQETLFKMSKVLSLETWSPLYAHGVRVGDRILLDTLDTDISDKNKP
HHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEHHCCCCCCCCCC
VRLYCYHINTAGVKKEFEFDLPAPPLGAQQTAVPAGDHVLHIARFARFDQGEIQALKHVI
EEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
EDRNSPMTQLHYIPLGAVTTRPHLIRTKVIDVVKDSEADKAGVEIGSFIGDGTDPKTESK
HCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCCCCCCCC
NIGGKTVVKSNGIYKMILPDGKKVTFSINKEITLSNFEGIRSAQLIGKTLVIAFNEMTDE
CCCCCEEEECCCEEEEEECCCCEEEEEECCEEEECCCCCHHHHHHHCCEEEEEEECCCCC
NTQWALQQIKNTPATAIVLDLRDNTGGSSIAVPKLLAGFLASGTRIATEIRGKKTNEINV
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEC
PTGYTPTDKPMAVLIGLVSASGAEVTARTLQFHRRARIYGAQSSGQVLMSRFYKLTDGSY
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCE
IQIPHANLLDPAGKPLEWYGVMPDVKKWKTLSDVRAGRDPVLECALTDLSGGQCH
EEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
TGHMRIKTGIKKALILMLSVVLVSLVAIAAHRFYIRLPQSRLFYAWKKVDEVYYDRTFA
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCEEC
GFDWPAVLATYKKHLPRFDWDGRETSPFIHNMLSLLEVSHLRHIPGFMAPEKIKEEAVLA
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NYFPELRDISGMVLVQETLFKMSKVLSLETWSPLYAHGVRVGDRILLDTLDTDISDKNKP
HHCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEHHCCCCCCCCCC
VRLYCYHINTAGVKKEFEFDLPAPPLGAQQTAVPAGDHVLHIARFARFDQGEIQALKHVI
EEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
EDRNSPMTQLHYIPLGAVTTRPHLIRTKVIDVVKDSEADKAGVEIGSFIGDGTDPKTESK
HCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCCCCCCCC
NIGGKTVVKSNGIYKMILPDGKKVTFSINKEITLSNFEGIRSAQLIGKTLVIAFNEMTDE
CCCCCEEEECCCEEEEEECCCCEEEEEECCEEEECCCCCHHHHHHHCCEEEEEEECCCCC
NTQWALQQIKNTPATAIVLDLRDNTGGSSIAVPKLLAGFLASGTRIATEIRGKKTNEINV
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEC
PTGYTPTDKPMAVLIGLVSASGAEVTARTLQFHRRARIYGAQSSGQVLMSRFYKLTDGSY
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCE
IQIPHANLLDPAGKPLEWYGVMPDVKKWKTLSDVRAGRDPVLECALTDLSGGQCH
EEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]