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The map label for this gene is 182680468

Identifier: 182680468

GI number: 182680468

Start: 4047907

End: 4048338

Strand: Reverse

Name: 182680468

Synonym: Bind_3568

Alternate gene names: NA

Gene position: 4048338-4047907 (Counterclockwise)

Preceding gene: 182680469

Following gene: 182680467

Centisome position: 97.08

GC content: 53.7

Gene sequence:

>432_bases
ATGGATAATCCCTACCTCTGGATCAAAACCCTGCATGTCCTGGCCATTATTTCCTGGATGGCGGGTCTCCTCTATCTCCC
GCGGCTCTTCGTCTATCACGCCGAGAGCCGGGAAGGATCGAGCGAGGATCTGACGTTCAAGATCATGGAACGCCGGTTGA
TGCGAGGGATCATGCTGCCGGCCATGCTGGTCGCCTGGGCGAGCGGTCTCATCCTCGCCTGGCAAGGCAATTTCTTTCAA
TCCGGCTGGTTGCACGGTAAACTTGCCTTTGTTATTCTCCTGACAGCGATACACGGATATCTGGCGCGAATCCGGCGGGA
ATTCGCTCGCGGCGACAATAAGCATTCTTCTCGTTTCTACCGCATGATTAACGAGGTCCCGACGGTCTTGATGATCGGCA
TCGTTTTTTTGGTCATTACTAAGCCATTTTGA

Upstream 100 bases:

>100_bases
TGCCCATGTGGAACGGCTGGTCGCGCTGCTGCGGGCATGATATCGGGCTGGTTTTCCGTTTGGACGGATCCGAACGAAGG
ACTTTTACCCTGGAGAAGGC

Downstream 100 bases:

>100_bases
TCCCGCACTCTTATACTACACATCCGCAGGTGGGAATTTTTTCAAAAGAATCAGATTGTTGTAAAAGATGATGAATGATT
GGGCTGGATTCGATTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDNPYLWIKTLHVLAIISWMAGLLYLPRLFVYHAESREGSSEDLTFKIMERRLMRGIMLPAMLVAWASGLILAWQGNFFQ
SGWLHGKLAFVILLTAIHGYLARIRREFARGDNKHSSRFYRMINEVPTVLMIGIVFLVITKPF

Sequences:

>Translated_143_residues
MDNPYLWIKTLHVLAIISWMAGLLYLPRLFVYHAESREGSSEDLTFKIMERRLMRGIMLPAMLVAWASGLILAWQGNFFQ
SGWLHGKLAFVILLTAIHGYLARIRREFARGDNKHSSRFYRMINEVPTVLMIGIVFLVITKPF
>Mature_143_residues
MDNPYLWIKTLHVLAIISWMAGLLYLPRLFVYHAESREGSSEDLTFKIMERRLMRGIMLPAMLVAWASGLILAWQGNFFQ
SGWLHGKLAFVILLTAIHGYLARIRREFARGDNKHSSRFYRMINEVPTVLMIGIVFLVITKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16584; Mature: 16584

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPYLWIKTLHVLAIISWMAGLLYLPRLFVYHAESREGSSEDLTFKIMERRLMRGIMLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMLVAWASGLILAWQGNFFQSGWLHGKLAFVILLTAIHGYLARIRREFARGDNKHSSRFY
HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMINEVPTVLMIGIVFLVITKPF
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNPYLWIKTLHVLAIISWMAGLLYLPRLFVYHAESREGSSEDLTFKIMERRLMRGIMLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMLVAWASGLILAWQGNFFQSGWLHGKLAFVILLTAIHGYLARIRREFARGDNKHSSRFY
HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RMINEVPTVLMIGIVFLVITKPF
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]