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The map label for this gene is omp16 [H]

Identifier: 182680300

GI number: 182680300

Start: 3861310

End: 3861828

Strand: Reverse

Name: omp16 [H]

Synonym: Bind_3400

Alternate gene names: 182680300

Gene position: 3861828-3861310 (Counterclockwise)

Preceding gene: 182680314

Following gene: 182680299

Centisome position: 92.61

GC content: 65.13

Gene sequence:

>519_bases
ATGGGCTTTCACCTGAGCGCGAGGGGTCTCAAGCTCGGCGCTGTGCTGGGCGTCGCCCTTGCGATGGCTGCCTGCGCCAA
GAACCCGGCCGATGATCCGACGGCCCTGGCGGGCTATGGCGCCAATGGCGGGCGTGGTGGTGCCGCGTCGCCCGGCAGCC
CGCAGGATTTTGCCGTCAATGTCGGCGATCGCGTCTTCTTCGAAAGCGATTCGAGCGAATTGACGCAGACCGCCCAGGCC
ACCCTGGATAAGCAGGCGCACTGGCTGCAGCAATATGGCCGCTATACCTTTACCATCGAGGGCCATGCCGACGAACGCGG
CACGCGTGAATATAATTTCGCGCTGGGCGCCCGCCGTGCCGAGGCGGCCAAGAATTATCTCGTGGCACGAGGCATTGCGA
CCTCTCGCCTGCGGACCATCAGCTATGGCAAGGAACGCCCCGTCGCGACCTGTGACGATATTTCCTGCTGGTCGCAGAAC
CGCCGCGCGGTCACGGTGCTCGGGGCCGGCCAATCCTGA

Upstream 100 bases:

>100_bases
CGAAATCGGTGGCGGGATTTTCGAAAGGATCGCGGCCATGCGGGACTGCGAAATATCTGGCTTGACCGAAATATCTGACT
TGACAATGAGGGAGTTTGGA

Downstream 100 bases:

>100_bases
TGGATTATGTGATCTTTCATAATCCGTCTTGCGGAACGTCGCGCAAGGTCCTGGCGGCCTTGCGCGAGGCCGGAATAGAG
TTGGAAATCCGGCTCTATTT

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MGFHLSARGLKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVNVGDRVFFESDSSELTQTAQA
TLDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRAEAAKNYLVARGIATSRLRTISYGKERPVATCDDISCWSQN
RRAVTVLGAGQS

Sequences:

>Translated_172_residues
MGFHLSARGLKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVNVGDRVFFESDSSELTQTAQA
TLDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRAEAAKNYLVARGIATSRLRTISYGKERPVATCDDISCWSQN
RRAVTVLGAGQS
>Mature_171_residues
GFHLSARGLKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVNVGDRVFFESDSSELTQTAQAT
LDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRAEAAKNYLVARGIATSRLRTISYGKERPVATCDDISCWSQNR
RAVTVLGAGQS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=157, Percent_Identity=38.8535031847134, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI48994946, Length=115, Percent_Identity=28.695652173913, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18215; Mature: 18084

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFHLSARGLKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEE
VGDRVFFESDSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEHHHCCHHH
EAAKNYLVARGIATSRLRTISYGKERPVATCDDISCWSQNRRAVTVLGAGQS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCC
>Mature Secondary Structure 
GFHLSARGLKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVN
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEE
VGDRVFFESDSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEHHHCCHHH
EAAKNYLVARGIATSRLRTISYGKERPVATCDDISCWSQNRRAVTVLGAGQS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]