| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182680314
Identifier: 182680314
GI number: 182680314
Start: 3873078
End: 3874217
Strand: Reverse
Name: 182680314
Synonym: Bind_3414
Alternate gene names: NA
Gene position: 3874217-3873078 (Counterclockwise)
Preceding gene: 182680315
Following gene: 182680300
Centisome position: 92.9
GC content: 57.11
Gene sequence:
>1140_bases ATGCAGCCTCAAGGTGAAGTCGTCGTCACATCGGGCGATATTATCGTCTATCGCCTGTTCGAACTCGCCGACAGTATCAA TCTCGATCTAGCCGAAAAACATTGGCTGGAGCATACAGGCTCCCTCGGCGCTCGGCGCAAATTGCAGGCAACGCCGGCAA AAGCCGTGGCCTATAACGTGCCTCCAGTCGTTCTGACGCTTGATCCCTTGCCCCTGAAACTGCGGACTGAGGATCAGGCG GCACGCAATGTCGAAGCGCAAGTGACGGCGCGCCTTTATGATATCGGCATCGTCACCCTCACCATGCGTTTTTCGGTCAG CCATCTTGGCTGGCACGCCTATTCCGCGCTGCTCAACGCCATTAACGCGACGGTGGGGCCGACATCGGGCAGCCTCCTTT GGCGTGACATGGTGAAGGCTTTGCGCGGCCCACTCGATGGTGCTCTCGACAAGCCGATCGATTCGCCGCTGGAAGAAGAT TATATCGTCGGCTTCGTGCGCTCGTTCGACCGGCCCTTGACTGGCCAACAGATCTTGAACGAGATCGATCTGGTGCCGCT GCTGTCCGGCGAAACTCTGCCGCTTTCGGAGCGCGCGCGCCAGGATCTTCTGCGCAATCATTTCTCTTATTATCTCGATG ATCTCGCCGTGCTCACCTGGGACCGCGCTTTGGTCGTCGATCCGCGCGGCGATTCGGATGTGCTCGATGTCGTCGAGGTG GCTAATGCCCAATTGCTGGAAATCAGCTATTTCAACAAATTGCTCACCGATGAATTGCCGCGCATGTATGATCTCGTCGA GACCACGCATCGGTCGAGCGGCCTTTGGTCATCCAGAAGATTGGCCGGCCTCGCGCGGCGTTTGTATACATTGTTCGCGG AAGTCACGGAAGTGAAGGAACATGTCGACAATGTTCTGACCGTGACCGAGGATGTCTATCTTGCCCGCATCTATGCCGCC TCGCTCACCCTCTTCCAGGTCAATGCGGTCGGCAATGCGGTCGATCAGAAACTGGCGATCATCCGCGATACTTACATGGC GCTCTACGATGATGCCTCCGGCGGCAGGGCCGATGCGATGGAAATCGCCGTCGTGGCTCTGATCGCGTTGGAGATCATCC TTACGCTCATTCATTGGTAA
Upstream 100 bases:
>100_bases CTATGAGGGCTCCCTTGCTTATCCGCCCGCGCCCGATCTTTGGGGATGAGTGCGATGGGAAAAAGCCATTTGATAGATTA TCGATCGACGCGGAGCCATT
Downstream 100 bases:
>100_bases TACCAACGGTCATAATGAATGACCTTTGGTAAAACGAGCTTCGCGTAAAGAGGCGTGTTTTCCCGATTGGGTGAATCGGG AAAACACGCTTTTTTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW
Sequences:
>Translated_379_residues MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW >Mature_379_residues MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42161; Mature: 42161
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNV CCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEECC PPVVLTLDPLPLKLRTEDQAARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNA CEEEEEECCCCEEEECCHHHHHCCHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHH INATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEEDYIVGFVRSFDRPLTGQQILN HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH EIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV HHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHH ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HVDNVLTVTEDVYLARIYAASLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAM HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH EIAVVALIALEIILTLIHW HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNV CCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEECC PPVVLTLDPLPLKLRTEDQAARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNA CEEEEEECCCCEEEECCHHHHHCCHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHH INATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEEDYIVGFVRSFDRPLTGQQILN HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH EIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV HHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHH ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HVDNVLTVTEDVYLARIYAASLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAM HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH EIAVVALIALEIILTLIHW HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA