Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182680314

Identifier: 182680314

GI number: 182680314

Start: 3873078

End: 3874217

Strand: Reverse

Name: 182680314

Synonym: Bind_3414

Alternate gene names: NA

Gene position: 3874217-3873078 (Counterclockwise)

Preceding gene: 182680315

Following gene: 182680300

Centisome position: 92.9

GC content: 57.11

Gene sequence:

>1140_bases
ATGCAGCCTCAAGGTGAAGTCGTCGTCACATCGGGCGATATTATCGTCTATCGCCTGTTCGAACTCGCCGACAGTATCAA
TCTCGATCTAGCCGAAAAACATTGGCTGGAGCATACAGGCTCCCTCGGCGCTCGGCGCAAATTGCAGGCAACGCCGGCAA
AAGCCGTGGCCTATAACGTGCCTCCAGTCGTTCTGACGCTTGATCCCTTGCCCCTGAAACTGCGGACTGAGGATCAGGCG
GCACGCAATGTCGAAGCGCAAGTGACGGCGCGCCTTTATGATATCGGCATCGTCACCCTCACCATGCGTTTTTCGGTCAG
CCATCTTGGCTGGCACGCCTATTCCGCGCTGCTCAACGCCATTAACGCGACGGTGGGGCCGACATCGGGCAGCCTCCTTT
GGCGTGACATGGTGAAGGCTTTGCGCGGCCCACTCGATGGTGCTCTCGACAAGCCGATCGATTCGCCGCTGGAAGAAGAT
TATATCGTCGGCTTCGTGCGCTCGTTCGACCGGCCCTTGACTGGCCAACAGATCTTGAACGAGATCGATCTGGTGCCGCT
GCTGTCCGGCGAAACTCTGCCGCTTTCGGAGCGCGCGCGCCAGGATCTTCTGCGCAATCATTTCTCTTATTATCTCGATG
ATCTCGCCGTGCTCACCTGGGACCGCGCTTTGGTCGTCGATCCGCGCGGCGATTCGGATGTGCTCGATGTCGTCGAGGTG
GCTAATGCCCAATTGCTGGAAATCAGCTATTTCAACAAATTGCTCACCGATGAATTGCCGCGCATGTATGATCTCGTCGA
GACCACGCATCGGTCGAGCGGCCTTTGGTCATCCAGAAGATTGGCCGGCCTCGCGCGGCGTTTGTATACATTGTTCGCGG
AAGTCACGGAAGTGAAGGAACATGTCGACAATGTTCTGACCGTGACCGAGGATGTCTATCTTGCCCGCATCTATGCCGCC
TCGCTCACCCTCTTCCAGGTCAATGCGGTCGGCAATGCGGTCGATCAGAAACTGGCGATCATCCGCGATACTTACATGGC
GCTCTACGATGATGCCTCCGGCGGCAGGGCCGATGCGATGGAAATCGCCGTCGTGGCTCTGATCGCGTTGGAGATCATCC
TTACGCTCATTCATTGGTAA

Upstream 100 bases:

>100_bases
CTATGAGGGCTCCCTTGCTTATCCGCCCGCGCCCGATCTTTGGGGATGAGTGCGATGGGAAAAAGCCATTTGATAGATTA
TCGATCGACGCGGAGCCATT

Downstream 100 bases:

>100_bases
TACCAACGGTCATAATGAATGACCTTTGGTAAAACGAGCTTCGCGTAAAGAGGCGTGTTTTCCCGATTGGGTGAATCGGG
AAAACACGCTTTTTTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA
ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED
YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV
ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA
SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW

Sequences:

>Translated_379_residues
MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA
ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED
YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV
ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA
SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW
>Mature_379_residues
MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNVPPVVLTLDPLPLKLRTEDQA
ARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNAINATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEED
YIVGFVRSFDRPLTGQQILNEIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV
ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKEHVDNVLTVTEDVYLARIYAA
SLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAMEIAVVALIALEIILTLIHW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42161; Mature: 42161

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNV
CCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEECC
PPVVLTLDPLPLKLRTEDQAARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNA
CEEEEEECCCCEEEECCHHHHHCCHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHH
INATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEEDYIVGFVRSFDRPLTGQQILN
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
EIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV
HHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHH
ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HVDNVLTVTEDVYLARIYAASLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAM
HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH
EIAVVALIALEIILTLIHW
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPQGEVVVTSGDIIVYRLFELADSINLDLAEKHWLEHTGSLGARRKLQATPAKAVAYNV
CCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEECC
PPVVLTLDPLPLKLRTEDQAARNVEAQVTARLYDIGIVTLTMRFSVSHLGWHAYSALLNA
CEEEEEECCCCEEEECCHHHHHCCHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHH
INATVGPTSGSLLWRDMVKALRGPLDGALDKPIDSPLEEDYIVGFVRSFDRPLTGQQILN
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
EIDLVPLLSGETLPLSERARQDLLRNHFSYYLDDLAVLTWDRALVVDPRGDSDVLDVVEV
HHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCHHHHHHHH
ANAQLLEISYFNKLLTDELPRMYDLVETTHRSSGLWSSRRLAGLARRLYTLFAEVTEVKE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HVDNVLTVTEDVYLARIYAASLTLFQVNAVGNAVDQKLAIIRDTYMALYDDASGGRADAM
HHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH
EIAVVALIALEIILTLIHW
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA