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The map label for this gene is pqqE [H]

Identifier: 182680221

GI number: 182680221

Start: 3775982

End: 3777127

Strand: Reverse

Name: pqqE [H]

Synonym: Bind_3319

Alternate gene names: 182680221

Gene position: 3777127-3775982 (Counterclockwise)

Preceding gene: 182680222

Following gene: 182680220

Centisome position: 90.58

GC content: 58.73

Gene sequence:

>1146_bases
ATGAACGAGACGAGCCCGCAGAACGTTGCGCCGCCGCTTACTCCGCCCGTTGCCCCACCCTTGGGCTTGCTCGCGGAACT
GACCCATCGTTGCCCGCTTGCCTGTCCCTATTGCTCGAATCCTTTGGAGCTTGAACCGCTCGCCCATGAACTTGATACGG
CGACCTGGAACCGCGTCTTTTCCGAGGCGGCGGCACTGGGTGTTCTGCAGGTGCATCTTTCTGGCGGCGAGCCTGTTGCG
CGGCGCGATCTTACCGAGATTGTCACGCATTGTGCGAAGATCGGCCTTTATACCAATCTGATCACTTCCGGCATCGGTCT
CACTGAAAGAGGCGTCGAGGCTCTGAGCGAAGCCGGACTCGATCATGTGCAATTGTCAATTCAGGATGCTGAAGCCGCCT
CCGCCGACCGGATTGCCGGTTATGAAGGGGCCTATGCTAAAAAGCAGGCGGTTGCTGCTTGGGTCATCAAGGCGGGCCTT
CCTTTGACCGTGAATGCGGTCATTCACCATGCCAATGTCAGCCGCGCTGGAAAAATGGTCGAAATGGCGGTCAAGCTCGG
TGCGCGCCGGGTCGAGATCGCGCATACACAATATTACGGCTGGGGCCTTGTCAATCGCGCCGCTCTCATGCCGGGACGAA
CTGAAGCGGAAGCGGCGGTCGCCGAAGTCGAAGCCTTGCGTCAGACCTATGCGGGCACGATTGTCATCGATCATGTGATG
CCCGATTACCATGCTCGCTATCCCAAGGCTTGCATGGGTGGCTGGGCGAGACGGACCTTGAACATAACGCCAACCGGTAA
GGCGCTTCCCTGTCACGCCGCCGAAACGATTCCAGGTCTTAACTTCGCCAATGTGCGCGATATGTCCCTGGCCGACATTT
GGTTTCATTCACCGGCGTTTGAGGCCTTTCGTGGCACCGCCTGGATGCGTGAGCCTTGTGCGTCCTGCGAAAGAAAAGAG
ATTGATTTTGGAGGCTGCCGCTGTCAGGCGCTTGCTTTGACGGGGGATGCCTCGCGGACCGATCCTGTCTGTATCGCTTC
GCCTGACCACGATAAAGTGGCCGCCGTGGCTGGTTTTCGGCAAGAGGGCGCGGCCGAGGTGCCTTATGTTTACCGGCGGC
AGAAACAGCCCGTTTCATCTGTGTAA

Upstream 100 bases:

>100_bases
TCGCCGGTCTTGCTGCGCAATTTTCCGCCGATCCGGCGCTCATCGAGCGCGATGTCCGCGCGCTGCTTGGCGAATTGGCC
AGTAAACGCATGTTGGATCT

Downstream 100 bases:

>100_bases
ATTTGAGGAAACGTGTGACCTGAGAGGCTTGCCGGTCGAGTGAGCCCACGAATATCGAGAATCATAGATTCTCGATACGT
CACTTTTAAAACCGTATCCA

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNETSPQNVAPPLTPPVAPPLGLLAELTHRCPLACPYCSNPLELEPLAHELDTATWNRVFSEAAALGVLQVHLSGGEPVA
RRDLTEIVTHCAKIGLYTNLITSGIGLTERGVEALSEAGLDHVQLSIQDAEAASADRIAGYEGAYAKKQAVAAWVIKAGL
PLTVNAVIHHANVSRAGKMVEMAVKLGARRVEIAHTQYYGWGLVNRAALMPGRTEAEAAVAEVEALRQTYAGTIVIDHVM
PDYHARYPKACMGGWARRTLNITPTGKALPCHAAETIPGLNFANVRDMSLADIWFHSPAFEAFRGTAWMREPCASCERKE
IDFGGCRCQALALTGDASRTDPVCIASPDHDKVAAVAGFRQEGAAEVPYVYRRQKQPVSSV

Sequences:

>Translated_381_residues
MNETSPQNVAPPLTPPVAPPLGLLAELTHRCPLACPYCSNPLELEPLAHELDTATWNRVFSEAAALGVLQVHLSGGEPVA
RRDLTEIVTHCAKIGLYTNLITSGIGLTERGVEALSEAGLDHVQLSIQDAEAASADRIAGYEGAYAKKQAVAAWVIKAGL
PLTVNAVIHHANVSRAGKMVEMAVKLGARRVEIAHTQYYGWGLVNRAALMPGRTEAEAAVAEVEALRQTYAGTIVIDHVM
PDYHARYPKACMGGWARRTLNITPTGKALPCHAAETIPGLNFANVRDMSLADIWFHSPAFEAFRGTAWMREPCASCERKE
IDFGGCRCQALALTGDASRTDPVCIASPDHDKVAAVAGFRQEGAAEVPYVYRRQKQPVSSV
>Mature_381_residues
MNETSPQNVAPPLTPPVAPPLGLLAELTHRCPLACPYCSNPLELEPLAHELDTATWNRVFSEAAALGVLQVHLSGGEPVA
RRDLTEIVTHCAKIGLYTNLITSGIGLTERGVEALSEAGLDHVQLSIQDAEAASADRIAGYEGAYAKKQAVAAWVIKAGL
PLTVNAVIHHANVSRAGKMVEMAVKLGARRVEIAHTQYYGWGLVNRAALMPGRTEAEAAVAEVEALRQTYAGTIVIDHVM
PDYHARYPKACMGGWARRTLNITPTGKALPCHAAETIPGLNFANVRDMSLADIWFHSPAFEAFRGTAWMREPCASCERKE
IDFGGCRCQALALTGDASRTDPVCIASPDHDKVAAVAGFRQEGAAEVPYVYRRQKQPVSSV

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40961; Mature: 40961

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETSPQNVAPPLTPPVAPPLGLLAELTHRCPLACPYCSNPLELEPLAHELDTATWNRVF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SEAAALGVLQVHLSGGEPVARRDLTEIVTHCAKIGLYTNLITSGIGLTERGVEALSEAGL
HHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DHVQLSIQDAEAASADRIAGYEGAYAKKQAVAAWVIKAGLPLTVNAVIHHANVSRAGKMV
CEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEHEEECCCHHHHHHHH
EMAVKLGARRVEIAHTQYYGWGLVNRAALMPGRTEAEAAVAEVEALRQTYAGTIVIDHVM
HHHHHHCCCEEEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCC
PDYHARYPKACMGGWARRTLNITPTGKALPCHAAETIPGLNFANVRDMSLADIWFHSPAF
CCHHHCCCHHHHCCHHHCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCHH
EAFRGTAWMREPCASCERKEIDFGGCRCQALALTGDASRTDPVCIASPDHDKVAAVAGFR
HHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHCHH
QEGAAEVPYVYRRQKQPVSSV
HCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MNETSPQNVAPPLTPPVAPPLGLLAELTHRCPLACPYCSNPLELEPLAHELDTATWNRVF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SEAAALGVLQVHLSGGEPVARRDLTEIVTHCAKIGLYTNLITSGIGLTERGVEALSEAGL
HHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DHVQLSIQDAEAASADRIAGYEGAYAKKQAVAAWVIKAGLPLTVNAVIHHANVSRAGKMV
CEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEHEEECCCHHHHHHHH
EMAVKLGARRVEIAHTQYYGWGLVNRAALMPGRTEAEAAVAEVEALRQTYAGTIVIDHVM
HHHHHHCCCEEEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCC
PDYHARYPKACMGGWARRTLNITPTGKALPCHAAETIPGLNFANVRDMSLADIWFHSPAF
CCHHHCCCHHHHCCHHHCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCHH
EAFRGTAWMREPCASCERKEIDFGGCRCQALALTGDASRTDPVCIASPDHDKVAAVAGFR
HHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHCHH
QEGAAEVPYVYRRQKQPVSSV
HCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA