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The map label for this gene is pqqD [H]

Identifier: 182680222

GI number: 182680222

Start: 3777124

End: 3777411

Strand: Reverse

Name: pqqD [H]

Synonym: Bind_3320

Alternate gene names: 182680222

Gene position: 3777411-3777124 (Counterclockwise)

Preceding gene: 182680223

Following gene: 182680221

Centisome position: 90.58

GC content: 59.72

Gene sequence:

>288_bases
ATGGGCGTCGAAACAGCGATTCAGCCGACCACCATTCCACGCCTGCCGCGTGGCGTCCGTCTCAAACATGATGCGACGCG
TGACGAATGGCTGCTGCTCGCCCCAGAACGTGTGGTCAAGCCCAATCCGAGTGCGATCGAGGTTTTGAAACGCTGTGATG
GCAAGGCGAATGTCGCGGAGATCGTCGCCGGTCTTGCTGCGCAATTTTCCGCCGATCCGGCGCTCATCGAGCGCGATGTC
CGCGCGCTGCTTGGCGAATTGGCCAGTAAACGCATGTTGGATCTATGA

Upstream 100 bases:

>100_bases
TGATGGCGCCGTACCGCCAGGCGCCTGGGTGGCGGGGCAAGGTTCTGACAAGGAACAGGCGGCCTGAACATTTGCAGGCC
GAGCGAAGGCAAATTGACTA

Downstream 100 bases:

>100_bases
ACGAGACGAGCCCGCAGAACGTTGCGCCGCCGCTTACTCCGCCCGTTGCCCCACCCTTGGGCTTGCTCGCGGAACTGACC
CATCGTTGCCCGCTTGCCTG

Product: coenzyme PQQ synthesis D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MGVETAIQPTTIPRLPRGVRLKHDATRDEWLLLAPERVVKPNPSAIEVLKRCDGKANVAEIVAGLAAQFSADPALIERDV
RALLGELASKRMLDL

Sequences:

>Translated_95_residues
MGVETAIQPTTIPRLPRGVRLKHDATRDEWLLLAPERVVKPNPSAIEVLKRCDGKANVAEIVAGLAAQFSADPALIERDV
RALLGELASKRMLDL
>Mature_94_residues
GVETAIQPTTIPRLPRGVRLKHDATRDEWLLLAPERVVKPNPSAIEVLKRCDGKANVAEIVAGLAAQFSADPALIERDVR
ALLGELASKRMLDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10364; Mature: 10233

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVETAIQPTTIPRLPRGVRLKHDATRDEWLLLAPERVVKPNPSAIEVLKRCDGKANVAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHCCCCCCHHH
IVAGLAAQFSADPALIERDVRALLGELASKRMLDL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVETAIQPTTIPRLPRGVRLKHDATRDEWLLLAPERVVKPNPSAIEVLKRCDGKANVAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHCCCCCCHHH
IVAGLAAQFSADPALIERDVRALLGELASKRMLDL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA