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The map label for this gene is dapA1 [H]

Identifier: 182679984

GI number: 182679984

Start: 3517749

End: 3518681

Strand: Reverse

Name: dapA1 [H]

Synonym: Bind_3080

Alternate gene names: 182679984

Gene position: 3518681-3517749 (Counterclockwise)

Preceding gene: 182679985

Following gene: 182679983

Centisome position: 84.38

GC content: 63.88

Gene sequence:

>933_bases
ATGTCCACCTCTCCCTTGAAGCGCCCCCATCGCGGTGTCTTTCCCGTCGCTCCGACAGTGTTCGACGCCAATGGAGCTCT
CGATCTCGATGGCCAGAAGCGCGCCATCGATTTCATGATCGATGCCGGCTCCAATGGACTCTGCATTCTCGCCAATTTCT
CCGAGCAATTCGTGCTGACCGACGCCGAGCGCGAGGCGGTGACTGTCACCGTGCTGGAGCATGTGGCCGGCCGCGTGCCG
GTCATCGTCACTACGACGCATTTCGCTACCGCGGTCTGCGCCGAGCGCTCGCGCCGGGCGCAGAATGCCGGTGCAGCCAT
GGTCATGATCATGCCGCCCTATCACGGCGCTACCTTCCGCGTGCCCGAGGCCGCCATCTTCGATTTCTATCGCGCCGTCT
CCGATGCCGTGTCGATTCCGATCATGGTGCAGGACGCGCCGGTGGCCGGGACACCGCTCCCGGTGCCGTTCCTCGCGCAC
ATGGCACGAGAGATCGAGAATCTCGCCTATTTCAAGATCGAGGTCCCGCAGGCAGCGGCCAAGCTCAGGGCGCTGATCGC
GGAAGGCGGCGACGCCATAGAAGGGCCATGGGATGGCGAAGAGGCGATCACGCTGATGGCAGACCTCGACGCCGGTGCGA
CCGGAGCGATGACTGGCGGCGGTTATCCCGATGGCATCCGCCAAATCACTGACGCTTATTTCGCCGGCGACCGGGAAGCG
GCGATGGATGCTTATCAGCGCTGGCTGCCCCTCATTAATTACGAGAACCGCCAGTGCGGTCTTTCGGCCTGCAAGGCGCT
CATGAAAGAAGGCGGTGTCATCGCCCACGACACCGTGCGGGCACCCCTGCAGCCGCCGCATCCCGCCATCCGTGCCGGCC
TCATCGAGATCGCGCAAAGGCTCAACCCACTCGTCTTGCAATGGGGCAGGTGA

Upstream 100 bases:

>100_bases
TATCGACCACGTGCTGCAGGCCGATCGCGGCGCCGATTTCGATTTCCTCGTCGGGCGTTCCGGCGCGCCCGTGCCGCGCG
ACAATCATTGAGGGTCATCA

Downstream 100 bases:

>100_bases
GGGCGGCGACGCTCCCAGGCACATACAACGACAATAAACAAAATCATGGCCAGGACAATCACGGCCAAAGGGGAAGGAAA
TGTCAGAGACAATCGTCAAT

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS 1 [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSTSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLTDAEREAVTVTVLEHVAGRVP
VIVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFRVPEAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAH
MAREIENLAYFKIEVPQAAAKLRALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREA
AMDAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQRLNPLVLQWGR

Sequences:

>Translated_310_residues
MSTSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLTDAEREAVTVTVLEHVAGRVP
VIVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFRVPEAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAH
MAREIENLAYFKIEVPQAAAKLRALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREA
AMDAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQRLNPLVLQWGR
>Mature_309_residues
STSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLTDAEREAVTVTVLEHVAGRVPV
IVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFRVPEAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAHM
AREIENLAYFKIEVPQAAAKLRALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREAA
MDAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQRLNPLVLQWGR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=176, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082415, Length=180, Percent_Identity=25, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33289; Mature: 33157

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLT
CCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEE
DAEREAVTVTVLEHVAGRVPVIVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFR
CCCCCEEEHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
VPEAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAHMAREIENLAYFKIEVPQAAA
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCHHHH
KLRALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREA
HHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
AMDAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
LNPLVLQWGR
CCCCEEECCC
>Mature Secondary Structure 
STSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLT
CCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEE
DAEREAVTVTVLEHVAGRVPVIVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFR
CCCCCEEEHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
VPEAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAHMAREIENLAYFKIEVPQAAA
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCHHHH
KLRALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREA
HHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
AMDAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
LNPLVLQWGR
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]