Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is yjeB [C]

Identifier: 182679703

GI number: 182679703

Start: 3177992

End: 3178480

Strand: Reverse

Name: yjeB [C]

Synonym: Bind_2791

Alternate gene names: 182679703

Gene position: 3178480-3177992 (Counterclockwise)

Preceding gene: 182679706

Following gene: 182679698

Centisome position: 76.22

GC content: 59.71

Gene sequence:

>489_bases
ATGATCTTGAAGAGCCAAGTCGAATGGGCACTACATTGCTGCGCAATTCTCGCCGGCCTGCCCGAGGGGCGCTACCTGTC
GACCAAGGCGCTGGCAGAACTCCACGGTCTGCCAAAGGAATATCTCTCCAAGGCACTGCAAAGCCTGTCACAGGCGGGGC
TCGTTCATACGATGCTAGGCCCGTCCGGCGGATATCGCCTTGCAAGACCGCCCACGGAACTGACCTTCCTTGATATTGTG
GAAGCTGTGGAAGGCAGGACACAGACCTTCGTGTGCAACAACATCCGCGTTAACAACCCCTGCCGCCCGAGGGACCATTG
CGACAGCAGCCCTTGTGCGGTGGCGCGGATCATGTGGGAAGCGGATGAAGCCTGGCGTCAGAAACTGCGCGGCGTCACGT
TGTCGGATCTCGGGCGGATCCTGTCGCAGGAGGTCTCTCCTACACTATGGAAGGACACCTTCGAATGGGTGCTTGACCGG
GCGGGATGA

Upstream 100 bases:

>100_bases
ATGCCTTTCAATTTAAGGCGATTTCCTCCGTTTACACCCCGCGTGTTTAGGGATATTCATTGTCCTTAATGCCATGGCGC
TCCGATCGTGGACCGAATTG

Downstream 100 bases:

>100_bases
ACACAAGACTTGCAGGAGGCATAGCCAACGAAAGATTGCTTGTCTCGCATTGTTTATAAACGAGATCGATAATTTCGTTT
CGGGCTGGTATATGGCTAAC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Protein Transcriptional Regulator; Rrf2 Family Transcriptional Regulator Protein; Transcriptional Regulator Protein; RF2 Family Protein; HTH-Type Transcriptional Regulator; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Rrf2 Family; Rrf2 Transcriptional Regulator; Transcription Factor IscR; RRF2 Family Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQAGLVHTMLGPSGGYRLARPPTELTFLDIV
EAVEGRTQTFVCNNIRVNNPCRPRDHCDSSPCAVARIMWEADEAWRQKLRGVTLSDLGRILSQEVSPTLWKDTFEWVLDR
AG

Sequences:

>Translated_162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQAGLVHTMLGPSGGYRLARPPTELTFLDIV
EAVEGRTQTFVCNNIRVNNPCRPRDHCDSSPCAVARIMWEADEAWRQKLRGVTLSDLGRILSQEVSPTLWKDTFEWVLDR
AG
>Mature_162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQAGLVHTMLGPSGGYRLARPPTELTFLDIV
EAVEGRTQTFVCNNIRVNNPCRPRDHCDSSPCAVARIMWEADEAWRQKLRGVTLSDLGRILSQEVSPTLWKDTFEWVLDR
AG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18060; Mature: 18060

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQAGLVHTMLG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCC
PSGGYRLARPPTELTFLDIVEAVEGRTQTFVCNNIRVNNPCRPRDHCDSSPCAVARIMWE
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHH
ADEAWRQKLRGVTLSDLGRILSQEVSPTLWKDTFEWVLDRAG
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQAGLVHTMLG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCC
PSGGYRLARPPTELTFLDIVEAVEGRTQTFVCNNIRVNNPCRPRDHCDSSPCAVARIMWE
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHH
ADEAWRQKLRGVTLSDLGRILSQEVSPTLWKDTFEWVLDRAG
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA