| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is tgt [H]
Identifier: 182679291
GI number: 182679291
Start: 2672362
End: 2673522
Strand: Reverse
Name: tgt [H]
Synonym: Bind_2335
Alternate gene names: 182679291
Gene position: 2673522-2672362 (Counterclockwise)
Preceding gene: 182679292
Following gene: 182679290
Centisome position: 64.11
GC content: 60.38
Gene sequence:
>1161_bases ATGAGTGAACCGGCTGAATCCGAAACGGCTTTTCGCTTCAAGCTCCTGCATCAGGACGGAGCGGCGCGTGCCGGTGTCAT CTCGACGCCGCGTGGAGAGATCCGCACGCCGGCTTTCATGCCGGTGGGCACGGCGGCAACGGTGAAAGCCATGCAGCCCG AGGCGGTGAGGGCGCTAGGCGCCGATATTGTTCTCTCTAACACCTATCATCTGATGTTGCGCCCCGGTGCCGAGCGGATT GCGGCCTTGGGCGGCCTGCATCGCTTCATGAACTGGCCACATCCCATTCTGACCGATTCCGGCGGCTTTCAGGTGATGTC GCTCGCGAAATTGCGCAAACTCGATGAAAACGGCGTCACTTTTCAATCGCATATCGATGGCGCCCGGCATGTTTTGACGC CTGAGCGCTCGATGGAGATCCAGGATCTCCTCGGCTCGGATATTGTGATGCAATTCGATGAATGTGTGCGGCTTCCTTGC GCGCCGGGAGAGGCCGAACGGGCCATGCGGCTGTCCTTGCGCTGGGGTGAGCGCAGCAAGCGGGCCTTGGCGCCCAAATC CGGACGCGCGCTTTTCGGCATTGTGCAAGGTGGCGATGACAAGGCGCTCAGACGGGAAAGTGCCACGGAACTCGTGAGCA TGGGGTTCGACGGTTATGCCTTGGGTGGTCTCGCGGTCGGCGAGCCGCAAGCGGTCATGCTCGACATGATCGAGACGGTC ATGCCTTTCTTGCCGGTTGATAAGCCTCATTATCTGATGGGCGTCGGCACACCGGACGATCTTCTGCAAAGCGTCAAACG CGGCATCGATATGTTCGATTGTGTCATGCCAACGCGTGCCGGGCGGCATGGCCTGGTGTTTACCCGCCATGGCCGGATCA ACCTGCGCAATGCCCGCCATGCCGATGATCCTGCGCCGATCGATGAGAAATCGTCCTGTGCCGCTGCCAGGATTTATTCA CGCGCCTATCTGCATCATTTGGTGAAGGCCAGTGAGATTCTCGGCATGATCCTCATGACGACGATCAATCTCGCCTATTA TCAGGAGCTGATGGCGGGGATGCGGGCGGCGATCGCCGAGGGCCGGTTTGAGGACTTCGCGGCAGAGACCGAGGCTCTCT GGCGTGAAGGCGAAAGCCTGAGCGGGCGGGCAAGCGCATAA
Upstream 100 bases:
>100_bases CCTATGCCCATGCGATCGCGGCCTCCTATCGGTTCTACAGCTATGGTGATGCCTGTCTGTTGTTTCGCGCGACAAGGAAT ACATCGACGGGGGCCGCGTT
Downstream 100 bases:
>100_bases GATCGGATTTAAAGATTGGAAAATGACCAATGAAAAAGAGGGGCGGGATCTTCCCAGGATCCCTGCCCCTCTTTATCTAG CCTCAGTCCTTGAACCTACC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSEPAESETAFRFKLLHQDGAARAGVISTPRGEIRTPAFMPVGTAATVKAMQPEAVRALGADIVLSNTYHLMLRPGAERI AALGGLHRFMNWPHPILTDSGGFQVMSLAKLRKLDENGVTFQSHIDGARHVLTPERSMEIQDLLGSDIVMQFDECVRLPC APGEAERAMRLSLRWGERSKRALAPKSGRALFGIVQGGDDKALRRESATELVSMGFDGYALGGLAVGEPQAVMLDMIETV MPFLPVDKPHYLMGVGTPDDLLQSVKRGIDMFDCVMPTRAGRHGLVFTRHGRINLRNARHADDPAPIDEKSSCAAARIYS RAYLHHLVKASEILGMILMTTINLAYYQELMAGMRAAIAEGRFEDFAAETEALWREGESLSGRASA
Sequences:
>Translated_386_residues MSEPAESETAFRFKLLHQDGAARAGVISTPRGEIRTPAFMPVGTAATVKAMQPEAVRALGADIVLSNTYHLMLRPGAERI AALGGLHRFMNWPHPILTDSGGFQVMSLAKLRKLDENGVTFQSHIDGARHVLTPERSMEIQDLLGSDIVMQFDECVRLPC APGEAERAMRLSLRWGERSKRALAPKSGRALFGIVQGGDDKALRRESATELVSMGFDGYALGGLAVGEPQAVMLDMIETV MPFLPVDKPHYLMGVGTPDDLLQSVKRGIDMFDCVMPTRAGRHGLVFTRHGRINLRNARHADDPAPIDEKSSCAAARIYS RAYLHHLVKASEILGMILMTTINLAYYQELMAGMRAAIAEGRFEDFAAETEALWREGESLSGRASA >Mature_385_residues SEPAESETAFRFKLLHQDGAARAGVISTPRGEIRTPAFMPVGTAATVKAMQPEAVRALGADIVLSNTYHLMLRPGAERIA ALGGLHRFMNWPHPILTDSGGFQVMSLAKLRKLDENGVTFQSHIDGARHVLTPERSMEIQDLLGSDIVMQFDECVRLPCA PGEAERAMRLSLRWGERSKRALAPKSGRALFGIVQGGDDKALRRESATELVSMGFDGYALGGLAVGEPQAVMLDMIETVM PFLPVDKPHYLMGVGTPDDLLQSVKRGIDMFDCVMPTRAGRHGLVFTRHGRINLRNARHADDPAPIDEKSSCAAARIYSR AYLHHLVKASEILGMILMTTINLAYYQELMAGMRAAIAEGRFEDFAAETEALWREGESLSGRASA
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=345, Percent_Identity=44.9275362318841, Blast_Score=298, Evalue=6e-81, Organism=Escherichia coli, GI1786607, Length=370, Percent_Identity=53.7837837837838, Blast_Score=385, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17544680, Length=359, Percent_Identity=41.7827298050139, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI19920510, Length=348, Percent_Identity=44.2528735632184, Blast_Score=307, Evalue=6e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42212; Mature: 42081
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPAESETAFRFKLLHQDGAARAGVISTPRGEIRTPAFMPVGTAATVKAMQPEAVRALG CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHC ADIVLSNTYHLMLRPGAERIAALGGLHRFMNWPHPILTDSGGFQVMSLAKLRKLDENGVT CCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCE FQSHIDGARHVLTPERSMEIQDLLGSDIVMQFDECVRLPCAPGEAERAMRLSLRWGERSK EHHHCCCCCEECCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCCCC RALAPKSGRALFGIVQGGDDKALRRESATELVSMGFDGYALGGLAVGEPQAVMLDMIETV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCEECCCCHHHHHHHHHHH MPFLPVDKPHYLMGVGTPDDLLQSVKRGIDMFDCVMPTRAGRHGLVFTRHGRINLRNARH HHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCEEECCCCC ADDPAPIDEKSSCAAARIYSRAYLHHLVKASEILGMILMTTINLAYYQELMAGMRAAIAE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRFEDFAAETEALWREGESLSGRASA CCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SEPAESETAFRFKLLHQDGAARAGVISTPRGEIRTPAFMPVGTAATVKAMQPEAVRALG CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHC ADIVLSNTYHLMLRPGAERIAALGGLHRFMNWPHPILTDSGGFQVMSLAKLRKLDENGVT CCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCE FQSHIDGARHVLTPERSMEIQDLLGSDIVMQFDECVRLPCAPGEAERAMRLSLRWGERSK EHHHCCCCCEECCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCCCC RALAPKSGRALFGIVQGGDDKALRRESATELVSMGFDGYALGGLAVGEPQAVMLDMIETV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCEECCCCHHHHHHHHHHH MPFLPVDKPHYLMGVGTPDDLLQSVKRGIDMFDCVMPTRAGRHGLVFTRHGRINLRNARH HHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCEEECCCCC ADDPAPIDEKSSCAAARIYSRAYLHHLVKASEILGMILMTTINLAYYQELMAGMRAAIAE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRFEDFAAETEALWREGESLSGRASA CCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]