| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yceG [C]
Identifier: 182679252
GI number: 182679252
Start: 2626865
End: 2628664
Strand: Reverse
Name: yceG [C]
Synonym: Bind_2296
Alternate gene names: 182679252
Gene position: 2628664-2626865 (Counterclockwise)
Preceding gene: 182679253
Following gene: 182679248
Centisome position: 63.04
GC content: 60.78
Gene sequence:
>1800_bases ATGGCCCCCATGTCTTCGCATATCGATGGCCTGCCGGAACAAGGATATCAGCCCATTCTCGCGGTGGGAGGCTTGTTTGG GCGCGGTACCGGACCGCAGAGCCCGAACGAGGCCTTGCAGCCGCAGGCAGCGCCGCCGCCGCCCCCTAACAAGCCCTCGA ACCGTCGGCGCGGACGCCTTTCGGCCTTTAGCGGCTTTCTCTCCTTTTTATTGATCGCCGCGATCGGCATCATGGTCGTG CTGATCTGGACCCAGAGGAAAATGCAGGAACCGGGGCCCCTGACGGCGGACCGAGTTGTCTTCATCGCGCCTGGCACGGA AGTGCCCGACATCATCGCCCGCCTTGATCGCGAGGGGATTATCGATAGTCCGCTGGGACTCAATATTGCCTTGCTGGTCG AGGGCAAGCGCTCCAAGGTCAAGGCTGGTGAATATCTTTTCAAACAGGGTGCGAGCCTGCGTGATGTGATGGACACGCTC GTCAGCGGCAAACAAGTCTTGCACGCCCTGACCCTGCCCGAGGGACTGACCAGCACCCAGATCGTCGCGCGCATCATGGA AGATGATGTCCTGCAAGGCGATATCCGAGATGTTCCTAAGGAAGGTACGATCCTTCCTGAAACCTATAAATTTACCCGCA ATTCCTTGCGCGCCGACCTCGTTCGCAAGATGCAGGAAGATCAAAAGCGTATCGTCGATCAGGTTTGGCAGAGGCGGGCG AGCGATCTTCCTTTGAAATCCCCTTACGAACTGGTCATCCTGGCCTCGATCGTCGAAAAGGAAACTGGCAAGGCGGATGA GCGGCCCCATGTGGCCAGCGTGTTTCTCAACCGCCTGCAGAAACGTATGCGGCTGCAATCGGACCCGACGATCGTCTATG GTCTGGTTGGCGGCAAGGGGACGCTCGGCCGGGCCATTCTGCGTTCCGAAGTCGAGAAGCCGACCCCTTATAATACCTAT GTGATCGACGGCTTGCCGCCGGGCCCGATCGCCAATCCCGGCCGGGCGGCGCTTGAGGCCGTCGCGAATCCTTCCCGCAC GCGTGACCTCTATTTCGTCGCCGATGGCACCGGCGGACATGTCTTTGCCGAAACACTCGATCAACATGTGCGCAATGTTC AGAAATGGCGGCAGATCGAGCACGATGCCAAGGAGAAGCAACAGGCCCCTGATGTCGACAAAATTGCACCCACGCCTGAT CAGCATGGGGAAGCCGATTTTCCGGGTGCCGTCTATGGCGGCTTGCCGCCCGCTTTGGCGACACCGTCCGCCGCAGCCTT ATCGTCCCTGCGCAATGCCCTCGTGAAGGAACAAAAGGGGGGTGCCCTTTCGGCGAAGGCGGGAGAGGCTAAACTGGCGC GTGCGTCAGCCGCGGCCGCGCAAAAATATGGCCTTGGCCCGGGGCTTGACGAATTGGGTCTCTCGATTCGGGGCGTGCCC TCGGGTGCGGAAGCTGCGGCTGCGCTTGACGGGCCGATTTCGGCGGAGACAGCGGAAGCCGCTGGGGGATCGATGGTTCT GCCGGTTTCCGCTGCACGCCGGGCGGAACAAAAAGCCCGGGCCATGCGCCTGGGGCTCGAACCCGGCAGGGACGAACTCC CAGCTGAAGCTCCTGCCGATTCTAGCGTTGCCGTATTGACGCAGCCCCAGCAGGAAGGGCGTGCTGCCGTTCATGGACCG CACCATGGGGTCACGGATGCCTCCGAGGGCAAGTCGTTCGATCCCTTGCTCGACAAGACCTATGATCTCAACTATGCGAA GACGGTCCCTGTCATCGGAAAAAATGATCCGCGGCTTTAA
Upstream 100 bases:
>100_bases CTTGCGCGGATGCTTTGTCTCTTTCCCGCTCGCGTATGTTTTCGCCGTTTGGTGACGAAACGACCCGAATCGAAGAAGTC CAGCAAGCGGATCGCTCACA
Downstream 100 bases:
>100_bases AGTATTTTTCATTTGGTTGATCGGACAATACTTTCCGCTCTTCTTGTTTTGACGGATTATCCGATCCCGCCCTAAACAGC TTTCCCGTGCAGATCATAGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MAPMSSHIDGLPEQGYQPILAVGGLFGRGTGPQSPNEALQPQAAPPPPPNKPSNRRRGRLSAFSGFLSFLLIAAIGIMVV LIWTQRKMQEPGPLTADRVVFIAPGTEVPDIIARLDREGIIDSPLGLNIALLVEGKRSKVKAGEYLFKQGASLRDVMDTL VSGKQVLHALTLPEGLTSTQIVARIMEDDVLQGDIRDVPKEGTILPETYKFTRNSLRADLVRKMQEDQKRIVDQVWQRRA SDLPLKSPYELVILASIVEKETGKADERPHVASVFLNRLQKRMRLQSDPTIVYGLVGGKGTLGRAILRSEVEKPTPYNTY VIDGLPPGPIANPGRAALEAVANPSRTRDLYFVADGTGGHVFAETLDQHVRNVQKWRQIEHDAKEKQQAPDVDKIAPTPD QHGEADFPGAVYGGLPPALATPSAAALSSLRNALVKEQKGGALSAKAGEAKLARASAAAAQKYGLGPGLDELGLSIRGVP SGAEAAAALDGPISAETAEAAGGSMVLPVSAARRAEQKARAMRLGLEPGRDELPAEAPADSSVAVLTQPQQEGRAAVHGP HHGVTDASEGKSFDPLLDKTYDLNYAKTVPVIGKNDPRL
Sequences:
>Translated_599_residues MAPMSSHIDGLPEQGYQPILAVGGLFGRGTGPQSPNEALQPQAAPPPPPNKPSNRRRGRLSAFSGFLSFLLIAAIGIMVV LIWTQRKMQEPGPLTADRVVFIAPGTEVPDIIARLDREGIIDSPLGLNIALLVEGKRSKVKAGEYLFKQGASLRDVMDTL VSGKQVLHALTLPEGLTSTQIVARIMEDDVLQGDIRDVPKEGTILPETYKFTRNSLRADLVRKMQEDQKRIVDQVWQRRA SDLPLKSPYELVILASIVEKETGKADERPHVASVFLNRLQKRMRLQSDPTIVYGLVGGKGTLGRAILRSEVEKPTPYNTY VIDGLPPGPIANPGRAALEAVANPSRTRDLYFVADGTGGHVFAETLDQHVRNVQKWRQIEHDAKEKQQAPDVDKIAPTPD QHGEADFPGAVYGGLPPALATPSAAALSSLRNALVKEQKGGALSAKAGEAKLARASAAAAQKYGLGPGLDELGLSIRGVP SGAEAAAALDGPISAETAEAAGGSMVLPVSAARRAEQKARAMRLGLEPGRDELPAEAPADSSVAVLTQPQQEGRAAVHGP HHGVTDASEGKSFDPLLDKTYDLNYAKTVPVIGKNDPRL >Mature_598_residues APMSSHIDGLPEQGYQPILAVGGLFGRGTGPQSPNEALQPQAAPPPPPNKPSNRRRGRLSAFSGFLSFLLIAAIGIMVVL IWTQRKMQEPGPLTADRVVFIAPGTEVPDIIARLDREGIIDSPLGLNIALLVEGKRSKVKAGEYLFKQGASLRDVMDTLV SGKQVLHALTLPEGLTSTQIVARIMEDDVLQGDIRDVPKEGTILPETYKFTRNSLRADLVRKMQEDQKRIVDQVWQRRAS DLPLKSPYELVILASIVEKETGKADERPHVASVFLNRLQKRMRLQSDPTIVYGLVGGKGTLGRAILRSEVEKPTPYNTYV IDGLPPGPIANPGRAALEAVANPSRTRDLYFVADGTGGHVFAETLDQHVRNVQKWRQIEHDAKEKQQAPDVDKIAPTPDQ HGEADFPGAVYGGLPPALATPSAAALSSLRNALVKEQKGGALSAKAGEAKLARASAAAAQKYGLGPGLDELGLSIRGVPS GAEAAAALDGPISAETAEAAGGSMVLPVSAARRAEQKARAMRLGLEPGRDELPAEAPADSSVAVLTQPQQEGRAAVHGPH HGVTDASEGKSFDPLLDKTYDLNYAKTVPVIGKNDPRL
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=314, Percent_Identity=36.3057324840764, Blast_Score=196, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 63945; Mature: 63813
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPMSSHIDGLPEQGYQPILAVGGLFGRGTGPQSPNEALQPQAAPPPPPNKPSNRRRGRL CCCCCCHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHH SAFSGFLSFLLIAAIGIMVVLIWTQRKMQEPGPLTADRVVFIAPGTEVPDIIARLDREGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCC IDSPLGLNIALLVEGKRSKVKAGEYLFKQGASLRDVMDTLVSGKQVLHALTLPEGLTSTQ CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVARIMEDDVLQGDIRDVPKEGTILPETYKFTRNSLRADLVRKMQEDQKRIVDQVWQRRA HHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLPLKSPYELVILASIVEKETGKADERPHVASVFLNRLQKRMRLQSDPTIVYGLVGGKG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC TLGRAILRSEVEKPTPYNTYVIDGLPPGPIANPGRAALEAVANPSRTRDLYFVADGTGGH HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCH VFAETLDQHVRNVQKWRQIEHDAKEKQQAPDVDKIAPTPDQHGEADFPGAVYGGLPPALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHC TPSAAALSSLRNALVKEQKGGALSAKAGEAKLARASAAAAQKYGLGPGLDELGLSIRGVP CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEECCC SGAEAAAALDGPISAETAEAAGGSMVLPVSAARRAEQKARAMRLGLEPGRDELPAEAPAD CCHHHHHHCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SSVAVLTQPQQEGRAAVHGPHHGVTDASEGKSFDPLLDKTYDLNYAKTVPVIGKNDPRL CCEEEEECCHHHCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEECCCCCCC >Mature Secondary Structure APMSSHIDGLPEQGYQPILAVGGLFGRGTGPQSPNEALQPQAAPPPPPNKPSNRRRGRL CCCCCHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHH SAFSGFLSFLLIAAIGIMVVLIWTQRKMQEPGPLTADRVVFIAPGTEVPDIIARLDREGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCC IDSPLGLNIALLVEGKRSKVKAGEYLFKQGASLRDVMDTLVSGKQVLHALTLPEGLTSTQ CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH IVARIMEDDVLQGDIRDVPKEGTILPETYKFTRNSLRADLVRKMQEDQKRIVDQVWQRRA HHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLPLKSPYELVILASIVEKETGKADERPHVASVFLNRLQKRMRLQSDPTIVYGLVGGKG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC TLGRAILRSEVEKPTPYNTYVIDGLPPGPIANPGRAALEAVANPSRTRDLYFVADGTGGH HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCH VFAETLDQHVRNVQKWRQIEHDAKEKQQAPDVDKIAPTPDQHGEADFPGAVYGGLPPALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHC TPSAAALSSLRNALVKEQKGGALSAKAGEAKLARASAAAAQKYGLGPGLDELGLSIRGVP CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEECCC SGAEAAAALDGPISAETAEAAGGSMVLPVSAARRAEQKARAMRLGLEPGRDELPAEAPAD CCHHHHHHCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SSVAVLTQPQQEGRAAVHGPHHGVTDASEGKSFDPLLDKTYDLNYAKTVPVIGKNDPRL CCEEEEECCHHHCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]