Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678980

Identifier: 182678980

GI number: 182678980

Start: 2301040

End: 2302440

Strand: Direct

Name: 182678980

Synonym: Bind_2015

Alternate gene names: NA

Gene position: 2301040-2302440 (Clockwise)

Preceding gene: 182678977

Following gene: 182678981

Centisome position: 55.18

GC content: 51.32

Gene sequence:

>1401_bases
ATGCCCATCCCAAGGACACATTGGAGACGGGCCAAGCAGTCGATCGATCCCCATGAAACGGATAGCCTACAAGAAAATAA
GCAACAAAAATATCGGAGCACGGTAACAAGAATGCGGGGACTTTTTCGCAATCAACGCGTCAATTCGATGATCTTAATTG
CATCATTGCGCGTCGTCTCTTTGGTGACCAATCTTGGCACCGGCATGATCACCGCATGGTCACTTGGTCCAGCGGGGCGC
GGCACACAAGCCGCCATATTGCTCGGAGCTCTGACCCTGAGTGGCATATGCAGTTTCGGTCTGCATACAGCGCTCGTTTA
CAATATGAAATCCGATCCACCAAATAAAAGCTATTATTTTGGCAGCGCCTTATTGATCGGATTAATCGTCAGTCTCATCG
GCGTCACCATCGGCTGGTTCGCCCTCCCCTGGATCTTGGACAAGTTTGATGAACATACTTTGCTCGCCGGGCGCCTCTTG
ACCTTTGTCGTACCGGTCAGCGTGATCTCCTATGTGTTGAACGGTGTCCTCGATGGACATCACGAATTCAATTTCGTGAG
CCGACTAGGCCTTTTAAACAATTTCTTCATCCTGTGTAGTCTTTCGCTTTTATGGCTCTCGGGATTGCTGACGCCGGCCA
CAGCCGCAATGAGCTATCTCCTGCCAACAGTTCCGATCACTGCAATGCTCGCTTGGCGTGCCACGAGTATTTTGCGCCCG
GCCACTCCCTTTCATGGCGCCTGTCTCAAGCGAATGTTCACCTATTCCGTGAGATTTTTCGGAGTCGATCTGATCTGCAC
CGTCAGCGGTTATCTTGATCAATTCCTCATGGTCTTGTTTCTCAATGCACAGGATCTCGGTCTCTATTCCGTTGCAACGA
CCGCTGAACGCGTGCTGGGCATCATCCCCGCCTCCATCCTCACGGTGACATTTCCCTCCGTTGCCGGCCGCTCGAAGGAT
GATATTCGCGAAATTGTCGGGATTACCGCCCGTTTGACAAGCATTGTAACGACCAGCGCCGCTGTTTTTCTCGGAATCTT
TGCCCCTTATTTTCTGTTGCTTTTGTATGGGCCAAAATTTGCGGAAGCGATCGTTCCTTTCCGCATTCTCCTGTTGTCAG
CTCTCGTCAGCAATGCCGTAGGGACTTTCTACCAAATGTACAGCGGCTCAGGTCGGCCGGAAATCGTGACTGTTTTTGAA
GCCATCGGTTTCGTCATCGCCGCGACAAGCATGGTGATATTAATACCCTTTTATGGTATCAATGGCGTTGCGATCGCGGC
TGTTCTCTCCGCAGCGGGCCGTCTTATTCTGGTCCTCGGCGGACTTCCTGCCGTTCTCCATTTATCCATTCCGCGATTGA
TCATTAATTGGGCAGATATCAAACGCGTCTTCCACCCATGA

Upstream 100 bases:

>100_bases
ATATTATGAACCGAATGAGAGGAGAGCTTTGCGAACGCGAGGTTTTGTTCGGGTCTTTCAGTTGGTTTCTCGGTTCAACA
CTCAATAAAATTTATCGATA

Downstream 100 bases:

>100_bases
TGCTTGCCCGAACAGGCTGATTTTGCCATGGACACACAATCTTTCTCCGGCGAAGATCTCCTGTCACGTCTGCGCCTTGT
GCTTGGCGAAAAACATGTTT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MPIPRTHWRRAKQSIDPHETDSLQENKQQKYRSTVTRMRGLFRNQRVNSMILIASLRVVSLVTNLGTGMITAWSLGPAGR
GTQAAILLGALTLSGICSFGLHTALVYNMKSDPPNKSYYFGSALLIGLIVSLIGVTIGWFALPWILDKFDEHTLLAGRLL
TFVVPVSVISYVLNGVLDGHHEFNFVSRLGLLNNFFILCSLSLLWLSGLLTPATAAMSYLLPTVPITAMLAWRATSILRP
ATPFHGACLKRMFTYSVRFFGVDLICTVSGYLDQFLMVLFLNAQDLGLYSVATTAERVLGIIPASILTVTFPSVAGRSKD
DIREIVGITARLTSIVTTSAAVFLGIFAPYFLLLLYGPKFAEAIVPFRILLLSALVSNAVGTFYQMYSGSGRPEIVTVFE
AIGFVIAATSMVILIPFYGINGVAIAAVLSAAGRLILVLGGLPAVLHLSIPRLIINWADIKRVFHP

Sequences:

>Translated_466_residues
MPIPRTHWRRAKQSIDPHETDSLQENKQQKYRSTVTRMRGLFRNQRVNSMILIASLRVVSLVTNLGTGMITAWSLGPAGR
GTQAAILLGALTLSGICSFGLHTALVYNMKSDPPNKSYYFGSALLIGLIVSLIGVTIGWFALPWILDKFDEHTLLAGRLL
TFVVPVSVISYVLNGVLDGHHEFNFVSRLGLLNNFFILCSLSLLWLSGLLTPATAAMSYLLPTVPITAMLAWRATSILRP
ATPFHGACLKRMFTYSVRFFGVDLICTVSGYLDQFLMVLFLNAQDLGLYSVATTAERVLGIIPASILTVTFPSVAGRSKD
DIREIVGITARLTSIVTTSAAVFLGIFAPYFLLLLYGPKFAEAIVPFRILLLSALVSNAVGTFYQMYSGSGRPEIVTVFE
AIGFVIAATSMVILIPFYGINGVAIAAVLSAAGRLILVLGGLPAVLHLSIPRLIINWADIKRVFHP
>Mature_465_residues
PIPRTHWRRAKQSIDPHETDSLQENKQQKYRSTVTRMRGLFRNQRVNSMILIASLRVVSLVTNLGTGMITAWSLGPAGRG
TQAAILLGALTLSGICSFGLHTALVYNMKSDPPNKSYYFGSALLIGLIVSLIGVTIGWFALPWILDKFDEHTLLAGRLLT
FVVPVSVISYVLNGVLDGHHEFNFVSRLGLLNNFFILCSLSLLWLSGLLTPATAAMSYLLPTVPITAMLAWRATSILRPA
TPFHGACLKRMFTYSVRFFGVDLICTVSGYLDQFLMVLFLNAQDLGLYSVATTAERVLGIIPASILTVTFPSVAGRSKDD
IREIVGITARLTSIVTTSAAVFLGIFAPYFLLLLYGPKFAEAIVPFRILLLSALVSNAVGTFYQMYSGSGRPEIVTVFEA
IGFVIAATSMVILIPFYGINGVAIAAVLSAAGRLILVLGGLPAVLHLSIPRLIINWADIKRVFHP

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50768; Mature: 50637

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPRTHWRRAKQSIDPHETDSLQENKQQKYRSTVTRMRGLFRNQRVNSMILIASLRVVS
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVTNLGTGMITAWSLGPAGRGTQAAILLGALTLSGICSFGLHTALVYNMKSDPPNKSYYF
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEH
GSALLIGLIVSLIGVTIGWFALPWILDKFDEHTLLAGRLLTFVVPVSVISYVLNGVLDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HEFNFVSRLGLLNNFFILCSLSLLWLSGLLTPATAAMSYLLPTVPITAMLAWRATSILRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATPFHGACLKRMFTYSVRFFGVDLICTVSGYLDQFLMVLFLNAQDLGLYSVATTAERVLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IIPASILTVTFPSVAGRSKDDIREIVGITARLTSIVTTSAAVFLGIFAPYFLLLLYGPKF
HHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AEAIVPFRILLLSALVSNAVGTFYQMYSGSGRPEIVTVFEAIGFVIAATSMVILIPFYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCC
NGVAIAAVLSAAGRLILVLGGLPAVLHLSIPRLIINWADIKRVFHP
CHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIPRTHWRRAKQSIDPHETDSLQENKQQKYRSTVTRMRGLFRNQRVNSMILIASLRVVS
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH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CHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA