| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182678743
Identifier: 182678743
GI number: 182678743
Start: 2006406
End: 2009351
Strand: Direct
Name: 182678743
Synonym: Bind_1772
Alternate gene names: NA
Gene position: 2006406-2009351 (Clockwise)
Preceding gene: 182678742
Following gene: 182678748
Centisome position: 48.11
GC content: 56.25
Gene sequence:
>2946_bases ATGAACGAAGATTCAAAAAGCTCTCGCCGCTTTGCGATCGCCCTCTCGTTTCCAGGGGAACACCGGGAATACGTCGAACG AGTTGCCTTGGCATTGCTACCGGAACTTGGCGGAGAACAAGGCAAGGCCCGCATCTTCTATGACGCGTGGCATGAAAGTA AAGTAATCGGATACAATTCGAACCGGAAGCTTCAGAAGGTATACTCAAAAGATTCCGATTTGATTGTTCCATTTTATTGC AAAGACTATTTGGAAAAGAAGTGGTGTGGCGTAGAACTGCGCGCCATCGAAGAATTGCTGTTTGATCAAGAATACGAAAG GGTGCTTCCTTTTCGCTTCGATATGGTGGACATCCCTGGATCTTTCAAAACCGACGTATTTCCGATTATTACGGAGCGTT CGCCGGAAGACATCGCTCGCCTGATCCTCGAACGCTACATGGAACTGCACGGTGACGAGGTCGTGCAGACGACTTCGCCC CATGCCACCCCGGCCCACGCCATCCCCGCTGATATCTCCCGCATCACTGAATATGCTCCAACGCAATTGATCGGTCGCGA GGCCGAAACTCAGCTCCTCCACGACGCCTGGGCGAAAGCCCAAAACAACGAAACGAAGCGCCCCCACCTCCTCACCTTTG TCGCCCTTGGCGGTGAGGGAAAAACCTCGCTTGTAGCAAAGTGGGCGGCAGAGCTTGCTCACCTGGATTGGCCAGGGTGC GACGCGGTGTTTGCATGGTCCTTTTACAGCCAGGGCTCAGAGGGACAGGTTGCGCCCTCCTCCGAGTTTTTCTTGAAGGA GGCCCTCACCTTTTTCGGTGACTCTGTGATGGCGGACAGCGCGGTGGGCGCGTTCGATAAGGGCCGGCGACTGGCAGAGC TTGTCGGCGGACGACAGGCACTGCTAATCCTTGATGGTCTGGAACCGCTACAATACGCGCCGACCTCACCCACACCGGGT GAGCTTAAGGACCCTGGCCTCGCCGCGCTGCTTAAAGGGCTCGCCACCAAAAACTACGGCCTATGCGTGGTCACCACCCG CTATTCAATCCCCAACTTACGGGCCTTTTGGCAGAACACCGCCCAAGAAAAGAACATCTTGCGCTTATCCAAGGAAGCGG GCGTGGCGTTGCTTCGGGTACTGGGAGTGAAAGGACAGCAACTAGAGTTCGAGACTCTCGTAGAGGATGTGAAAGGTCAC GCGCTCACTTTGAACCTGCTGGGCGCTTATCTTCGTGACGCCCATGCCGGGGATATCCGCAAGCGAGACCTCATTAATCT GCGAGAAGCCGATGAAGAACAAGGCGGACACGCTTTTCGCGTCATGGATGCCTATGTGCGGTGGTTCGAGAGCGACAGGA GCGAAGGAAAGAAAAGTCAGCGCGCCCTCGCTCTATTACGGTTGTTGGGGTTGTTCGATCGGCCAGCGGATGCGGGTTGC CTCATCGCATTGTGGAAAGCTCCCCTCATCCCGAATCTTACTGAGCCGCTCGTAGCGATAAGCGAGGCGCATCGCAATCA AGCCTTCACCCGGCTGCAGGATGCAAAGCTGGTCACAATTAAACGGGACGGGTCCGGTGTGTTGCTCACGTTGGATGCTC ATCCATTACTACGTGCATACTTTGCCTTACAACTTCGCACGTACCACCCCGAGGCGTGGCGCGTCGCCCATGAGCGGCTT TATAAGTACCTTTGCACCACAACGGAGGACAAACCCGAGCCTACGCTCGAAGATCTGCAGCCTCTCTATCAGGCCGTTTC TCACGGTTGCCAAGCCGAGATGCAGCAGGAAGCATGTGAAATGTACCGTAACCGGATCATTCGCGAATCGGCATCCTACA GTACAAGAAGACTTGGTGCTTTAGGTTCTAACTTGGGAGCTCTGGCCTGCTTCTTCGAGCAACAGTGGAGCCGCGTCTCG CCCGTGCTCACAGAAAACGCCAAAGGCTGGCTAATGTCAGAAGCCGCCCACCATCTGGTATTTTTGGGGCGGTTAACCGA GGCCATGGAGCCGGTGCAGGTTGCGCTAGAGGTGTCCATCGCGAGGCAGGCCTGGAAGAACGCTGCTATCACCGTTATCA ACCTCAATCATCTGGAGCGGGCACTGGGCAAGGTCGCCAAGGCGGTCAAGACGGCCGAACTGTCAGTGGACTACGCTGAC CGTAGCACTGATGCCACCACTCTAGCGATCGGGTTCTCAGCCTATGCCGAGGCTCTTCACCAAGCGGGACGAGAGGCTGA GGCGGCGGCGCAGTTTCTAAAGGCTGAGGCGATATGGATTAGGCTCCAACCCGAGAACCCACTGCTACACTCGTCGGCAG GCTTCCACTATTGTGACCTGCTCCTTGCCGGTGCCGAACGGGCGGCTTGGCGAGGCATGTTTAATTCATCATTTGTCCCA CAACCGTCCTTGTCAGAATCCTGCAGAGAGGTCTCCAAGCACGCAGCGCAGACGCTGCTGTGGAGCGAACAGAACGCCTT CTCTCTCCTTGATATCGCTCATGACCGCCTCACACTTGGCCGCACGGCGCTCTACATGACAATTCTGGATAGCGATATGC CCCAACAGTCCAATTTTTGCCGCGACTCGCTCGATCAGGCCATTGAGGGATTCCGGCGTGCCCAAGTGCAATACGCCCTT GTTGAAGGTCTCCTCTCCCGTGCGTGGCTACGTTTCCTCGCAGGGGCACCGAGCGGTGCCGAGAGTTCGCAAAGCGACCT CGACGAAGCCTGGGAAATTGTGGAACGCGGGCCGATGCCGTTGTTTATGGCAGACATTCATTTGCACCGAGCACGATTGT TTGGATTAAGCAAAGATCGACCAGCAACGTATCCGTGGACCTCTTTGCAACACGACCTCACCGAGGCGCGGCGGTTGATC GAAAAGCATGGCTATGAGCGGCGCAAGGAAGAACTCGAAGATGCAGAGGCCGCCGCCCGTCGGTAA
Upstream 100 bases:
>100_bases GCGACTATCTCCGTCCTACTAAGACCATCATCGAACGGATGTCAGCTTAATTGATTTCGCGCCCCACGCTCTTTTTAATC CGCCACTTGCGACGAATAAC
Downstream 100 bases:
>100_bases AGTGCGTCCAAAGCAACCAAAGCCTTCTGGGTTTTGGATCGGCGCCGATGCCAGCCGGCAAGAAGCATAAAACCTGACAC AAGGTGGCATCATGATAAAC
Product: WD repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 981; Mature: 981
Protein sequence:
>981_residues MNEDSKSSRRFAIALSFPGEHREYVERVALALLPELGGEQGKARIFYDAWHESKVIGYNSNRKLQKVYSKDSDLIVPFYC KDYLEKKWCGVELRAIEELLFDQEYERVLPFRFDMVDIPGSFKTDVFPIITERSPEDIARLILERYMELHGDEVVQTTSP HATPAHAIPADISRITEYAPTQLIGREAETQLLHDAWAKAQNNETKRPHLLTFVALGGEGKTSLVAKWAAELAHLDWPGC DAVFAWSFYSQGSEGQVAPSSEFFLKEALTFFGDSVMADSAVGAFDKGRRLAELVGGRQALLILDGLEPLQYAPTSPTPG ELKDPGLAALLKGLATKNYGLCVVTTRYSIPNLRAFWQNTAQEKNILRLSKEAGVALLRVLGVKGQQLEFETLVEDVKGH ALTLNLLGAYLRDAHAGDIRKRDLINLREADEEQGGHAFRVMDAYVRWFESDRSEGKKSQRALALLRLLGLFDRPADAGC LIALWKAPLIPNLTEPLVAISEAHRNQAFTRLQDAKLVTIKRDGSGVLLTLDAHPLLRAYFALQLRTYHPEAWRVAHERL YKYLCTTTEDKPEPTLEDLQPLYQAVSHGCQAEMQQEACEMYRNRIIRESASYSTRRLGALGSNLGALACFFEQQWSRVS PVLTENAKGWLMSEAAHHLVFLGRLTEAMEPVQVALEVSIARQAWKNAAITVINLNHLERALGKVAKAVKTAELSVDYAD RSTDATTLAIGFSAYAEALHQAGREAEAAAQFLKAEAIWIRLQPENPLLHSSAGFHYCDLLLAGAERAAWRGMFNSSFVP QPSLSESCREVSKHAAQTLLWSEQNAFSLLDIAHDRLTLGRTALYMTILDSDMPQQSNFCRDSLDQAIEGFRRAQVQYAL VEGLLSRAWLRFLAGAPSGAESSQSDLDEAWEIVERGPMPLFMADIHLHRARLFGLSKDRPATYPWTSLQHDLTEARRLI EKHGYERRKEELEDAEAAARR
Sequences:
>Translated_981_residues MNEDSKSSRRFAIALSFPGEHREYVERVALALLPELGGEQGKARIFYDAWHESKVIGYNSNRKLQKVYSKDSDLIVPFYC KDYLEKKWCGVELRAIEELLFDQEYERVLPFRFDMVDIPGSFKTDVFPIITERSPEDIARLILERYMELHGDEVVQTTSP HATPAHAIPADISRITEYAPTQLIGREAETQLLHDAWAKAQNNETKRPHLLTFVALGGEGKTSLVAKWAAELAHLDWPGC DAVFAWSFYSQGSEGQVAPSSEFFLKEALTFFGDSVMADSAVGAFDKGRRLAELVGGRQALLILDGLEPLQYAPTSPTPG ELKDPGLAALLKGLATKNYGLCVVTTRYSIPNLRAFWQNTAQEKNILRLSKEAGVALLRVLGVKGQQLEFETLVEDVKGH ALTLNLLGAYLRDAHAGDIRKRDLINLREADEEQGGHAFRVMDAYVRWFESDRSEGKKSQRALALLRLLGLFDRPADAGC LIALWKAPLIPNLTEPLVAISEAHRNQAFTRLQDAKLVTIKRDGSGVLLTLDAHPLLRAYFALQLRTYHPEAWRVAHERL YKYLCTTTEDKPEPTLEDLQPLYQAVSHGCQAEMQQEACEMYRNRIIRESASYSTRRLGALGSNLGALACFFEQQWSRVS PVLTENAKGWLMSEAAHHLVFLGRLTEAMEPVQVALEVSIARQAWKNAAITVINLNHLERALGKVAKAVKTAELSVDYAD RSTDATTLAIGFSAYAEALHQAGREAEAAAQFLKAEAIWIRLQPENPLLHSSAGFHYCDLLLAGAERAAWRGMFNSSFVP QPSLSESCREVSKHAAQTLLWSEQNAFSLLDIAHDRLTLGRTALYMTILDSDMPQQSNFCRDSLDQAIEGFRRAQVQYAL VEGLLSRAWLRFLAGAPSGAESSQSDLDEAWEIVERGPMPLFMADIHLHRARLFGLSKDRPATYPWTSLQHDLTEARRLI EKHGYERRKEELEDAEAAARR >Mature_981_residues MNEDSKSSRRFAIALSFPGEHREYVERVALALLPELGGEQGKARIFYDAWHESKVIGYNSNRKLQKVYSKDSDLIVPFYC KDYLEKKWCGVELRAIEELLFDQEYERVLPFRFDMVDIPGSFKTDVFPIITERSPEDIARLILERYMELHGDEVVQTTSP HATPAHAIPADISRITEYAPTQLIGREAETQLLHDAWAKAQNNETKRPHLLTFVALGGEGKTSLVAKWAAELAHLDWPGC DAVFAWSFYSQGSEGQVAPSSEFFLKEALTFFGDSVMADSAVGAFDKGRRLAELVGGRQALLILDGLEPLQYAPTSPTPG ELKDPGLAALLKGLATKNYGLCVVTTRYSIPNLRAFWQNTAQEKNILRLSKEAGVALLRVLGVKGQQLEFETLVEDVKGH ALTLNLLGAYLRDAHAGDIRKRDLINLREADEEQGGHAFRVMDAYVRWFESDRSEGKKSQRALALLRLLGLFDRPADAGC LIALWKAPLIPNLTEPLVAISEAHRNQAFTRLQDAKLVTIKRDGSGVLLTLDAHPLLRAYFALQLRTYHPEAWRVAHERL YKYLCTTTEDKPEPTLEDLQPLYQAVSHGCQAEMQQEACEMYRNRIIRESASYSTRRLGALGSNLGALACFFEQQWSRVS PVLTENAKGWLMSEAAHHLVFLGRLTEAMEPVQVALEVSIARQAWKNAAITVINLNHLERALGKVAKAVKTAELSVDYAD RSTDATTLAIGFSAYAEALHQAGREAEAAAQFLKAEAIWIRLQPENPLLHSSAGFHYCDLLLAGAERAAWRGMFNSSFVP QPSLSESCREVSKHAAQTLLWSEQNAFSLLDIAHDRLTLGRTALYMTILDSDMPQQSNFCRDSLDQAIEGFRRAQVQYAL VEGLLSRAWLRFLAGAPSGAESSQSDLDEAWEIVERGPMPLFMADIHLHRARLFGLSKDRPATYPWTSLQHDLTEARRLI EKHGYERRKEELEDAEAAARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 109957; Mature: 109957
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDSKSSRRFAIALSFPGEHREYVERVALALLPELGGEQGKARIFYDAWHESKVIGYNS CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECC NRKLQKVYSKDSDLIVPFYCKDYLEKKWCGVELRAIEELLFDQEYERVLPFRFDMVDIPG CHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCEEEEEEECCC SFKTDVFPIITERSPEDIARLILERYMELHGDEVVQTTSPHATPAHAIPADISRITEYAP CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHCC TQLIGREAETQLLHDAWAKAQNNETKRPHLLTFVALGGEGKTSLVAKWAAELAHLDWPGC HHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC DAVFAWSFYSQGSEGQVAPSSEFFLKEALTFFGDSVMADSAVGAFDKGRRLAELVGGRQA CCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEE LLILDGLEPLQYAPTSPTPGELKDPGLAALLKGLATKNYGLCVVTTRYSIPNLRAFWQNT EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH AQEKNILRLSKEAGVALLRVLGVKGQQLEFETLVEDVKGHALTLNLLGAYLRDAHAGDIR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCC KRDLINLREADEEQGGHAFRVMDAYVRWFESDRSEGKKSQRALALLRLLGLFDRPADAGC HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LIALWKAPLIPNLTEPLVAISEAHRNQAFTRLQDAKLVTIKRDGSGVLLTLDAHPLLRAY HHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCHHHHHH FALQLRTYHPEAWRVAHERLYKYLCTTTEDKPEPTLEDLQPLYQAVSHGCQAEMQQEACE HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH MYRNRIIRESASYSTRRLGALGSNLGALACFFEQQWSRVSPVLTENAKGWLMSEAAHHLV HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHH FLGRLTEAMEPVQVALEVSIARQAWKNAAITVINLNHLERALGKVAKAVKTAELSVDYAD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCC RSTDATTLAIGFSAYAEALHQAGREAEAAAQFLKAEAIWIRLQPENPLLHSSAGFHYCDL CCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEECCCCCCEECCCCCHHHHH LLAGAERAAWRGMFNSSFVPQPSLSESCREVSKHAAQTLLWSEQNAFSLLDIAHDRLTLG HHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RTALYMTILDSDMPQQSNFCRDSLDQAIEGFRRAQVQYALVEGLLSRAWLRFLAGAPSGA HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESSQSDLDEAWEIVERGPMPLFMADIHLHRARLFGLSKDRPATYPWTSLQHDLTEARRLI CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH EKHGYERRKEELEDAEAAARR HHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEDSKSSRRFAIALSFPGEHREYVERVALALLPELGGEQGKARIFYDAWHESKVIGYNS CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECC NRKLQKVYSKDSDLIVPFYCKDYLEKKWCGVELRAIEELLFDQEYERVLPFRFDMVDIPG CHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCEEEEEEECCC SFKTDVFPIITERSPEDIARLILERYMELHGDEVVQTTSPHATPAHAIPADISRITEYAP CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHCC TQLIGREAETQLLHDAWAKAQNNETKRPHLLTFVALGGEGKTSLVAKWAAELAHLDWPGC HHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC DAVFAWSFYSQGSEGQVAPSSEFFLKEALTFFGDSVMADSAVGAFDKGRRLAELVGGRQA CCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCEE LLILDGLEPLQYAPTSPTPGELKDPGLAALLKGLATKNYGLCVVTTRYSIPNLRAFWQNT EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH AQEKNILRLSKEAGVALLRVLGVKGQQLEFETLVEDVKGHALTLNLLGAYLRDAHAGDIR HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCC KRDLINLREADEEQGGHAFRVMDAYVRWFESDRSEGKKSQRALALLRLLGLFDRPADAGC HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LIALWKAPLIPNLTEPLVAISEAHRNQAFTRLQDAKLVTIKRDGSGVLLTLDAHPLLRAY HHEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCHHHHHH FALQLRTYHPEAWRVAHERLYKYLCTTTEDKPEPTLEDLQPLYQAVSHGCQAEMQQEACE HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH MYRNRIIRESASYSTRRLGALGSNLGALACFFEQQWSRVSPVLTENAKGWLMSEAAHHLV HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHH FLGRLTEAMEPVQVALEVSIARQAWKNAAITVINLNHLERALGKVAKAVKTAELSVDYAD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCC RSTDATTLAIGFSAYAEALHQAGREAEAAAQFLKAEAIWIRLQPENPLLHSSAGFHYCDL CCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEECCCCCCEECCCCCHHHHH LLAGAERAAWRGMFNSSFVPQPSLSESCREVSKHAAQTLLWSEQNAFSLLDIAHDRLTLG HHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RTALYMTILDSDMPQQSNFCRDSLDQAIEGFRRAQVQYALVEGLLSRAWLRFLAGAPSGA HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESSQSDLDEAWEIVERGPMPLFMADIHLHRARLFGLSKDRPATYPWTSLQHDLTEARRLI CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH EKHGYERRKEELEDAEAAARR HHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA