Click here to switch to the map view.

The map label for this gene is 182678748

Identifier: 182678748

GI number: 182678748

Start: 2015182

End: 2016036

Strand: Direct

Name: 182678748

Synonym: Bind_1777

Alternate gene names: NA

Gene position: 2015182-2016036 (Clockwise)

Preceding gene: 182678743

Following gene: 182678749

Centisome position: 48.32

GC content: 61.05

Gene sequence:

>855_bases
ATGTCACCTGAAGAACGCCAATTGCTGACCGGCTTGTTCGACCGGATTAAAACCGTCGCGAATAATCCGCGTGACCGGGA
AGCTGAGACACTCATCGCGGAAGCCGTCAAGGTGCAGCCCTATGCGCCTTATCTCATGGCGCAAACCGTTCTCGTTCAGG
AACAGGCCTTGAGTGCCGCCAACGAGCGGCTGCAACAATTGGAAGCCGAGGTTCAGGCGCTAAAGCAGCAGGTCGAGCAG
CAACCGGCCCAAAGTGGCGGCTTCCTCTCCGGCTTGGGCTCGCTGTTTGGCGGTGGCGTCCCGCCTCGCCCCAGCAACCC
GCCCCCGCCCTACCCGGGCGCTCCCAACAACAATCCCGGCCCCAATAATCCCAGCCCTTGGGGACGGCCACCGCAGGCGC
AGGCCCCGCAGCCTTCGCAGGCTGGCTGGTCGCAACAGCCAGGTTACGCACAACCGCCGCAAGCTGGCCCCTGGGGTGCG
GCTCCGCCTCCAAATTTAGGGCCGGGGCAAGGCGGTGGATTCTTGAAGGGTGCGCTGGGTGCGGCGGCCGGTGTCGCGGG
TGGCGTGCTGCTGGCTGATTCGATCAAAGGCCTCTTTGGTGGCCATAATTCTAATCTCGGCATTGGTTCGGGCTTAGGCA
ATCTCGGCACCGGCGGCCTTGGATCATCGGCTGGGCTCGGCGAGAACCAAGGCGGCGGCGAAACCATTATCAATAATTAT
TATGGATCGGACGCTCCTTACCAACAGGCCGATTCCTGGCAAGACGGGGATCATTATCCCGAAGATACGCAAAATGCCTC
CGATTACGGTGGGGATTACGATAATTCCGGCGATGATGACAGTTACGACGTCTGA

Upstream 100 bases:

>100_bases
CAGCGCGCGTCTCCTCGATCGTCGCATCGACTTGATCCGGCAGAGATACAATTCGAACCCGTTGCGGGCCGTGACGCCGC
AGCTTTCATGGGAGAACAGG

Downstream 100 bases:

>100_bases
GCATTCTTTCCAGATACGGACCGCGCCAGCCCTTTGAAAATGGTCCTGGAACGGCCTGCTTCCTTCCAAATCCGTCCATT
TTCACGGAGCGCTCCTAGGG

Product: putative periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSPEERQLLTGLFDRIKTVANNPRDREAETLIAEAVKVQPYAPYLMAQTVLVQEQALSAANERLQQLEAEVQALKQQVEQ
QPAQSGGFLSGLGSLFGGGVPPRPSNPPPPYPGAPNNNPGPNNPSPWGRPPQAQAPQPSQAGWSQQPGYAQPPQAGPWGA
APPPNLGPGQGGGFLKGALGAAAGVAGGVLLADSIKGLFGGHNSNLGIGSGLGNLGTGGLGSSAGLGENQGGGETIINNY
YGSDAPYQQADSWQDGDHYPEDTQNASDYGGDYDNSGDDDSYDV

Sequences:

>Translated_284_residues
MSPEERQLLTGLFDRIKTVANNPRDREAETLIAEAVKVQPYAPYLMAQTVLVQEQALSAANERLQQLEAEVQALKQQVEQ
QPAQSGGFLSGLGSLFGGGVPPRPSNPPPPYPGAPNNNPGPNNPSPWGRPPQAQAPQPSQAGWSQQPGYAQPPQAGPWGA
APPPNLGPGQGGGFLKGALGAAAGVAGGVLLADSIKGLFGGHNSNLGIGSGLGNLGTGGLGSSAGLGENQGGGETIINNY
YGSDAPYQQADSWQDGDHYPEDTQNASDYGGDYDNSGDDDSYDV
>Mature_283_residues
SPEERQLLTGLFDRIKTVANNPRDREAETLIAEAVKVQPYAPYLMAQTVLVQEQALSAANERLQQLEAEVQALKQQVEQQ
PAQSGGFLSGLGSLFGGGVPPRPSNPPPPYPGAPNNNPGPNNPSPWGRPPQAQAPQPSQAGWSQQPGYAQPPQAGPWGAA
PPPNLGPGQGGGFLKGALGAAAGVAGGVLLADSIKGLFGGHNSNLGIGSGLGNLGTGGLGSSAGLGENQGGGETIINNYY
GSDAPYQQADSWQDGDHYPEDTQNASDYGGDYDNSGDDDSYDV

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29195; Mature: 29064

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPEERQLLTGLFDRIKTVANNPRDREAETLIAEAVKVQPYAPYLMAQTVLVQEQALSAA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NERLQQLEAEVQALKQQVEQQPAQSGGFLSGLGSLFGGGVPPRPSNPPPPYPGAPNNNPG
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PNNPSPWGRPPQAQAPQPSQAGWSQQPGYAQPPQAGPWGAAPPPNLGPGQGGGFLKGALG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AAAGVAGGVLLADSIKGLFGGHNSNLGIGSGLGNLGTGGLGSSAGLGENQGGGETIINNY
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
YGSDAPYQQADSWQDGDHYPEDTQNASDYGGDYDNSGDDDSYDV
CCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPEERQLLTGLFDRIKTVANNPRDREAETLIAEAVKVQPYAPYLMAQTVLVQEQALSAA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NERLQQLEAEVQALKQQVEQQPAQSGGFLSGLGSLFGGGVPPRPSNPPPPYPGAPNNNPG
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PNNPSPWGRPPQAQAPQPSQAGWSQQPGYAQPPQAGPWGAAPPPNLGPGQGGGFLKGALG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AAAGVAGGVLLADSIKGLFGGHNSNLGIGSGLGNLGTGGLGSSAGLGENQGGGETIINNY
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
YGSDAPYQQADSWQDGDHYPEDTQNASDYGGDYDNSGDDDSYDV
CCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA