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The map label for this gene is sodC [H]

Identifier: 182678536

GI number: 182678536

Start: 1763466

End: 1763984

Strand: Direct

Name: sodC [H]

Synonym: Bind_1561

Alternate gene names: 182678536

Gene position: 1763466-1763984 (Clockwise)

Preceding gene: 182678531

Following gene: 182678539

Centisome position: 42.29

GC content: 60.69

Gene sequence:

>519_bases
ATGCGAGGATTGCTCATCGCCGCCAGCCTGATACTGGCGGGCCCCATGGCCCTGGCTGCGCCGGCCGAATATAGTTCTGT
GATCAAGGGAGCAGATGGTGCCGAACTCGGCACGGTCGATCTGAAGGAAGGGCCCCTCGGCGTGCTCGTCCATTTTGACC
TGCATGGATTGAAGCCCGGCTGGCATGGCGTGCATTTCCACGCCAAGGGCGATTGCAGCGATCCGAAATTCTTGAACTCC
GGTGCTCATGTCGAGGCTGAGGGCGAGAAACTCGCCCATGGATTCCTCAATCCACAGGGCACGCATGCGGCCGATCTGCC
GAATGTTTTCGCCGCGGCCGATGGCACTGTACATGCCGATACTTTTTCGACTTTCGTCTCGCTGCATGGCGAGAAACAGC
GCCCTGCCCTGCTCGGAGGCGCCGGCACCGCGCTGGTCGTGCATGAAAACCCGGATGATTACACCAATCCACCGATCGGT
GGGGCTGGAGCCCGAATCGCCTGCGCGGTGTTGAAATAG

Upstream 100 bases:

>100_bases
GCCGTCCTACCCCGCCCCGCTCTCACTCTTGCAAGTGCGTCTTTCCTCTGATCCCTTCTCTTCACCCGTGATACCGGGTG
AACGAATCGGGAGAAGATCA

Downstream 100 bases:

>100_bases
TTTCAGCCGGAAGCTGGCAGGCCGAAACGGTAGACGCCTTTGAAGGTGGCTGGATCTTCCACCGGCACGCCCTTGCGGTA
AATCACGAGCTTGCCCTCCA

Product: Cu-Zn family superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRGLLIAASLILAGPMALAAPAEYSSVIKGADGAELGTVDLKEGPLGVLVHFDLHGLKPGWHGVHFHAKGDCSDPKFLNS
GAHVEAEGEKLAHGFLNPQGTHAADLPNVFAAADGTVHADTFSTFVSLHGEKQRPALLGGAGTALVVHENPDDYTNPPIG
GAGARIACAVLK

Sequences:

>Translated_172_residues
MRGLLIAASLILAGPMALAAPAEYSSVIKGADGAELGTVDLKEGPLGVLVHFDLHGLKPGWHGVHFHAKGDCSDPKFLNS
GAHVEAEGEKLAHGFLNPQGTHAADLPNVFAAADGTVHADTFSTFVSLHGEKQRPALLGGAGTALVVHENPDDYTNPPIG
GAGARIACAVLK
>Mature_172_residues
MRGLLIAASLILAGPMALAAPAEYSSVIKGADGAELGTVDLKEGPLGVLVHFDLHGLKPGWHGVHFHAKGDCSDPKFLNS
GAHVEAEGEKLAHGFLNPQGTHAADLPNVFAAADGTVHADTFSTFVSLHGEKQRPALLGGAGTALVVHENPDDYTNPPIG
GAGARIACAVLK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May function against extracytoplasmic toxic oxygen species [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=182, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17607; Mature: 17607

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLLIAASLILAGPMALAAPAEYSSVIKGADGAELGTVDLKEGPLGVLVHFDLHGLKPG
CCCHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCCC
WHGVHFHAKGDCSDPKFLNSGAHVEAEGEKLAHGFLNPQGTHAADLPNVFAAADGTVHAD
CCEEEEEECCCCCCCCEECCCCEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCCCEEHH
TFSTFVSLHGEKQRPALLGGAGTALVVHENPDDYTNPPIGGAGARIACAVLK
HHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRGLLIAASLILAGPMALAAPAEYSSVIKGADGAELGTVDLKEGPLGVLVHFDLHGLKPG
CCCHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCCC
WHGVHFHAKGDCSDPKFLNSGAHVEAEGEKLAHGFLNPQGTHAADLPNVFAAADGTVHAD
CCEEEEEECCCCCCCCEECCCCEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCCCEEHH
TFSTFVSLHGEKQRPALLGGAGTALVVHENPDDYTNPPIGGAGARIACAVLK
HHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2345128; 11259647; 7050107 [H]