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The map label for this gene is erfK [H]

Identifier: 182678539

GI number: 182678539

Start: 1766607

End: 1767200

Strand: Direct

Name: erfK [H]

Synonym: Bind_1564

Alternate gene names: 182678539

Gene position: 1766607-1767200 (Clockwise)

Preceding gene: 182678536

Following gene: 182678540

Centisome position: 42.36

GC content: 59.09

Gene sequence:

>594_bases
ATGCGGGGCATGACCCGAGCGAAATTTTTCGAGCGCCGGATTGTTTTGGTGTGCGTAGCAGTCCTGGCACTGGCCTCGCC
CGCCGCAGCTCTCGAGAACCCCTTGAATCGCGGGCCGCTCGCCGATTTCCTAAATATTTTTCATCAGCAGGCCATTCCCC
GCCAGCTCGTGATCTGGAACCATCCAGAATATGGCAAGGGCACGATCGTCGTCTCAACCAAGGAGCGGCGGCTCTATTAT
GTGCTGGGCGAGGACCGCGCCTATGAATATGGCGTCGGCGTCGGCCGGGAGGGCTTTTCCTGGGCGGGAACCAAAACCGT
CACCCGCAAGCGCGAATGGCCGGACTGGCATCCGCCAGCGCAAATGCTGAAGCGTCGTCCCGATCTGCCGAAATACATGC
CAGGCGGCATGGACAATCCACTCGGCGCGCGGGCTCTTTATTTGGGATCGAGCAATTACCGCATCCATGGCTCAAACGAG
CCGGATACGATTGGCGCAGCGGTGTCATCGGGCTGTATCCGCATGACCAATCGTGACATCGTGGATCTTTATGATCGCGC
TAAGGTCGGCACCAAGGTCGTGGTGTTGCGATAG

Upstream 100 bases:

>100_bases
CTCTGCCAGGGCATGATCCCCAGAAACAAACCTTGGCCATGACCAAAATCCAGCCATATTCCCTCACGAAAACCAGCCGA
CTAGTCGGAGGAGCAGATTG

Downstream 100 bases:

>100_bases
ACTTATTCTGGCCGTGTCGCAAAATTTTTAGGTTAACGGTGTTTTGAGGAAATGAGTGGATTTTGCACCTCCGATTTGGG
AGGCCAACCATGATCATCAA

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRGMTRAKFFERRIVLVCVAVLALASPAAALENPLNRGPLADFLNIFHQQAIPRQLVIWNHPEYGKGTIVVSTKERRLYY
VLGEDRAYEYGVGVGREGFSWAGTKTVTRKREWPDWHPPAQMLKRRPDLPKYMPGGMDNPLGARALYLGSSNYRIHGSNE
PDTIGAAVSSGCIRMTNRDIVDLYDRAKVGTKVVVLR

Sequences:

>Translated_197_residues
MRGMTRAKFFERRIVLVCVAVLALASPAAALENPLNRGPLADFLNIFHQQAIPRQLVIWNHPEYGKGTIVVSTKERRLYY
VLGEDRAYEYGVGVGREGFSWAGTKTVTRKREWPDWHPPAQMLKRRPDLPKYMPGGMDNPLGARALYLGSSNYRIHGSNE
PDTIGAAVSSGCIRMTNRDIVDLYDRAKVGTKVVVLR
>Mature_197_residues
MRGMTRAKFFERRIVLVCVAVLALASPAAALENPLNRGPLADFLNIFHQQAIPRQLVIWNHPEYGKGTIVVSTKERRLYY
VLGEDRAYEYGVGVGREGFSWAGTKTVTRKREWPDWHPPAQMLKRRPDLPKYMPGGMDNPLGARALYLGSSNYRIHGSNE
PDTIGAAVSSGCIRMTNRDIVDLYDRAKVGTKVVVLR

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=177, Percent_Identity=38.4180790960452, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787968, Length=153, Percent_Identity=40.5228758169935, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787040, Length=151, Percent_Identity=38.4105960264901, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787356, Length=156, Percent_Identity=35.8974358974359, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 22142; Mature: 22142

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGMTRAKFFERRIVLVCVAVLALASPAAALENPLNRGPLADFLNIFHQQAIPRQLVIWN
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC
HPEYGKGTIVVSTKERRLYYVLGEDRAYEYGVGVGREGFSWAGTKTVTRKREWPDWHPPA
CCCCCCEEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHH
QMLKRRPDLPKYMPGGMDNPLGARALYLGSSNYRIHGSNEPDTIGAAVSSGCIRMTNRDI
HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHCCEEEECCCCH
VDLYDRAKVGTKVVVLR
HHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRGMTRAKFFERRIVLVCVAVLALASPAAALENPLNRGPLADFLNIFHQQAIPRQLVIWN
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC
HPEYGKGTIVVSTKERRLYYVLGEDRAYEYGVGVGREGFSWAGTKTVTRKREWPDWHPPA
CCCCCCEEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHH
QMLKRRPDLPKYMPGGMDNPLGARALYLGSSNYRIHGSNEPDTIGAAVSSGCIRMTNRDI
HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHCCEEEECCCCH
VDLYDRAKVGTKVVVLR
HHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]