| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678531
Identifier: 182678531
GI number: 182678531
Start: 1758244
End: 1759395
Strand: Direct
Name: 182678531
Synonym: Bind_1556
Alternate gene names: NA
Gene position: 1758244-1759395 (Clockwise)
Preceding gene: 182678530
Following gene: 182678536
Centisome position: 42.16
GC content: 53.47
Gene sequence:
>1152_bases ATGACTTCTTTCACGCGCTCACAATTGCTTCTCAGTTTCTTATTCTTTCTCGCAATATTCCTAGCGGTATGGGGAGAGAT CCACCATTTCGTGCGGGATACCCACATTTTTACTTTCTTTGCCGCGACCGTCGCGGCGGTGATTGCGACGGTCCAGTCCT CAGGCAAGACGCGTGATTCCCGCCTGATGCTGGCGGCTTTCTTGTTGGGACTGACCCTTCTCGAGGGCACAGCTCTTCTG ATCGAGCGTAGGCCTAATCTCACAGTCACTGACGGCTGGTCTGTATCCCGTCCGGTGATTGGTTGGGGGCCGGGGCATTC TGGCATTTTACACGCCCGGAAACAGAAAGCCGGGGGTGAGCTCATCTACCAAGTCGATTACACAATTGACGATAATCTCT TGCGGCAAACCCGCTCCGCATCCAATGGACCGGCCGTAGTTTTCTTTGGCGATTCCTTCACCTTTGGTGAAGGAGTCAAT GACTCGGATACATTGCCTCAGCAATTTGCCGATTTGCGGCACCAGCAAGACCGAGTCCTCAATCTGGGCTTTTCCGGCTA TGGGCCGCAACAATTCTTGCGTGGCGTCGAAGCCGGTTATTACGACAAGATCATCGGTGATCAGCCAAAGATCTTCTTTT TCCTGACAGCCCCGTGGCACGCGCAACGGACCGCTTGCAAAGCCTCCTGGCTCGCAAGGGCTCCCCGTTATCACCTGACG GACGAGGGGATTGCCTTCGATGGCCAATGCCGGGAAGAGGGCTTCAACCTTTTTTTGTCGGAGTTTTTATATAACACGGC ATTTTACCGCTTCTTTCTAACGCCTTTCGCGGAAAGGCTCACGCATGATGACGTCGAGCTTTATATTCGCGTCGTTTTGG AAGCAGTCCGGCAGTCAAAGGCCAAATACGGTGTAGAGACGATCATTCCCTATCTTCCCGATGGCGAGCCTTATCTTGCT GGGACAGGCTTCACTGATCAGGATATTGTCGAGCGTTTCGAAGCCGCGGGGGCCAAGGTGATCGATGCCTCGCTCACTGA TGTCAAAAACCCGCGTCTTGGCCTGGAAATTCCGAGCGATGGGCATCCGACAGGGCGAGCTAATCGTTTGCGGGCAGAAT TGCTGATTGATTCCTCGATAAACAGGCTTTGA
Upstream 100 bases:
>100_bases TTGGGTCTGATGCTCTAGTGGATAGGGTCGGTAACCCTCCGCTTTCTATTTCTATTGCCTATTCTGAATAATCCTTCATC CCGGTAACATTGCTACAGAG
Downstream 100 bases:
>100_bases ACAAGCCTGAATAAGGGCGTCCCCTAAAGAGCCGTATCGTAAGGACGTATTTCCTCAATCGAGCGCGAAGGCATTTTTGT AGTCGCGCGCGAGAGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTSFTRSQLLLSFLFFLAIFLAVWGEIHHFVRDTHIFTFFAATVAAVIATVQSSGKTRDSRLMLAAFLLGLTLLEGTALL IERRPNLTVTDGWSVSRPVIGWGPGHSGILHARKQKAGGELIYQVDYTIDDNLLRQTRSASNGPAVVFFGDSFTFGEGVN DSDTLPQQFADLRHQQDRVLNLGFSGYGPQQFLRGVEAGYYDKIIGDQPKIFFFLTAPWHAQRTACKASWLARAPRYHLT DEGIAFDGQCREEGFNLFLSEFLYNTAFYRFFLTPFAERLTHDDVELYIRVVLEAVRQSKAKYGVETIIPYLPDGEPYLA GTGFTDQDIVERFEAAGAKVIDASLTDVKNPRLGLEIPSDGHPTGRANRLRAELLIDSSINRL
Sequences:
>Translated_383_residues MTSFTRSQLLLSFLFFLAIFLAVWGEIHHFVRDTHIFTFFAATVAAVIATVQSSGKTRDSRLMLAAFLLGLTLLEGTALL IERRPNLTVTDGWSVSRPVIGWGPGHSGILHARKQKAGGELIYQVDYTIDDNLLRQTRSASNGPAVVFFGDSFTFGEGVN DSDTLPQQFADLRHQQDRVLNLGFSGYGPQQFLRGVEAGYYDKIIGDQPKIFFFLTAPWHAQRTACKASWLARAPRYHLT DEGIAFDGQCREEGFNLFLSEFLYNTAFYRFFLTPFAERLTHDDVELYIRVVLEAVRQSKAKYGVETIIPYLPDGEPYLA GTGFTDQDIVERFEAAGAKVIDASLTDVKNPRLGLEIPSDGHPTGRANRLRAELLIDSSINRL >Mature_382_residues TSFTRSQLLLSFLFFLAIFLAVWGEIHHFVRDTHIFTFFAATVAAVIATVQSSGKTRDSRLMLAAFLLGLTLLEGTALLI ERRPNLTVTDGWSVSRPVIGWGPGHSGILHARKQKAGGELIYQVDYTIDDNLLRQTRSASNGPAVVFFGDSFTFGEGVND SDTLPQQFADLRHQQDRVLNLGFSGYGPQQFLRGVEAGYYDKIIGDQPKIFFFLTAPWHAQRTACKASWLARAPRYHLTD EGIAFDGQCREEGFNLFLSEFLYNTAFYRFFLTPFAERLTHDDVELYIRVVLEAVRQSKAKYGVETIIPYLPDGEPYLAG TGFTDQDIVERFEAAGAKVIDASLTDVKNPRLGLEIPSDGHPTGRANRLRAELLIDSSINRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42858; Mature: 42727
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFTRSQLLLSFLFFLAIFLAVWGEIHHFVRDTHIFTFFAATVAAVIATVQSSGKTRDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RLMLAAFLLGLTLLEGTALLIERRPNLTVTDGWSVSRPVIGWGPGHSGILHARKQKAGGE HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHCCCCC LIYQVDYTIDDNLLRQTRSASNGPAVVFFGDSFTFGEGVNDSDTLPQQFADLRHQQDRVL EEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE NLGFSGYGPQQFLRGVEAGYYDKIIGDQPKIFFFLTAPWHAQRTACKASWLARAPRYHLT ECCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEC DEGIAFDGQCREEGFNLFLSEFLYNTAFYRFFLTPFAERLTHDDVELYIRVVLEAVRQSK CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AKYGVETIIPYLPDGEPYLAGTGFTDQDIVERFEAAGAKVIDASLTDVKNPRLGLEIPSD HHCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECHHHHCCCCCCEEECCCC GHPTGRANRLRAELLIDSSINRL CCCCCCHHHHHHHHEECCHHCCC >Mature Secondary Structure TSFTRSQLLLSFLFFLAIFLAVWGEIHHFVRDTHIFTFFAATVAAVIATVQSSGKTRDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RLMLAAFLLGLTLLEGTALLIERRPNLTVTDGWSVSRPVIGWGPGHSGILHARKQKAGGE HHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHCCCCC LIYQVDYTIDDNLLRQTRSASNGPAVVFFGDSFTFGEGVNDSDTLPQQFADLRHQQDRVL EEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE NLGFSGYGPQQFLRGVEAGYYDKIIGDQPKIFFFLTAPWHAQRTACKASWLARAPRYHLT ECCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEC DEGIAFDGQCREEGFNLFLSEFLYNTAFYRFFLTPFAERLTHDDVELYIRVVLEAVRQSK CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AKYGVETIIPYLPDGEPYLAGTGFTDQDIVERFEAAGAKVIDASLTDVKNPRLGLEIPSD HHCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECHHHHCCCCCCEEECCCC GHPTGRANRLRAELLIDSSINRL CCCCCCHHHHHHHHEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA