| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677996
Identifier: 182677996
GI number: 182677996
Start: 1159389
End: 1160669
Strand: Direct
Name: 182677996
Synonym: Bind_1010
Alternate gene names: NA
Gene position: 1159389-1160669 (Clockwise)
Preceding gene: 182677995
Following gene: 182677997
Centisome position: 27.8
GC content: 60.97
Gene sequence:
>1281_bases ATGACCGCACTCGCCACCACTGACGCTCCGTCTCGCGCTGCCTCCGTCCAGAAGGTCGTTTCCAAGGGAGGGATCGAGGC CTGGCTCGTCGAGGATTATGCGGTGCCGCTCATTGCCCTTGAATGTGCCTTCAAGGGAGGCGCGGCGCAGGACCCGGAGG GCAAGCCAGGAGCCGCGACCCTGCTCGCTGGCCTGCTCGATGAAGGCGCCGGCGCCCTGGATGCCGATGCCTTTCACCAG GCGCTGGACGAAGATGCGATCGAACTGTCTTTTTCGGCCGATCGCGACGTTCTGGGCGGCCGGATGCAAACCTTGTCGCG CAATGCCGAGCGCGCCTTTGAATTGTTGCGGCTGGCCGTCAATGAGGCGCGGCTCGATGCCGAACCTTTCGCCCGCGTGA CCAGCCAGATGATGGCGAGCCTCAAGCGCGAGGCGAATGATCCTGATTATGTCGCCGGCCGGACCTTTCGCGCTCTGTCC TATCCAAACCATCCCTATGGCTTACCGGTGCGTGGCGATCTCGTCAGCCTGCCGGATCTGACGCGGAATGATCTCCTCGA TCTTCGCCGCCGCTTGCTGGCGCGGGATAGTCTGAAAATCGCCGTCGTTGGCGCCATCGACGCGGCGACGCTCGGCGCCT ATCTCGACCAGGCTTTCGGCGATTTGCCGGCCCATGGCGATCTTGTTGCCATCCCCGATCAACTCTTTACCGGCGAGGGG CGGCGGCAGGTCGTCGATCTCGACATTCCGCAATCAACCATCCGTTTTGGCCGCCAGGGCATTGGCCGCAAGGATCCGGA TTTTATCGCTGCGACAGTGGTCAATCATATTCTCGGCGGCGGCATTTTCTCGGCACGATTGTTTCGCGAGGTACGCGAGA AACGCGGGCTCGCCTATTCCGTCTATTCCCAACTCGTCACTTTCGATCATGGGGCCATGCTGACCGGCGGCACCTCGACC AAAAACGAGCGTGTGGCGGAATCCCTGAGCGTCATCGAGGAGCAGATCCGCGATCTTTCCGAGAATGGACCGACCGGGGA AGAGCTCGACAAGGCCCGGAAATATCTGATCGGGTCCTATGCCTTGCGTTTCGATACGTCGACCAAGATCGCCGGCCAGC TCGTGCATTTGCAGACGGATGGTTTCGACGTCGATTATCTCGACGCGCGCAATCAATGGATCGCGGCTGTAACGATGGAC GATGCCAAGCGCGTCTGCAAACGTTTGTTTGGCGATGGCCATCTGCTTGTCGCCATCGCCGGACGGCCTGAAAATCTGTA A
Upstream 100 bases:
>100_bases CGCCATCGGCGTGCCATGAGGAGCGTTTTCATGACCCGCACGTTTGTTTTGCCCCGGCCAGGACCTGTTCCGCAGCGGGG CCTTTGGGAATTTTCCGACC
Downstream 100 bases:
>100_bases AAGCTCATGCGGTAAAATCTTCAAGCGATTAACCTTTGACGATCCGCCGTCTCGATCCCGTCCTCATCGATCGCATCGCC GCCGGCGAGGTCATCGAGCG
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTALATTDAPSRAASVQKVVSKGGIEAWLVEDYAVPLIALECAFKGGAAQDPEGKPGAATLLAGLLDEGAGALDADAFHQ ALDEDAIELSFSADRDVLGGRMQTLSRNAERAFELLRLAVNEARLDAEPFARVTSQMMASLKREANDPDYVAGRTFRALS YPNHPYGLPVRGDLVSLPDLTRNDLLDLRRRLLARDSLKIAVVGAIDAATLGAYLDQAFGDLPAHGDLVAIPDQLFTGEG RRQVVDLDIPQSTIRFGRQGIGRKDPDFIAATVVNHILGGGIFSARLFREVREKRGLAYSVYSQLVTFDHGAMLTGGTST KNERVAESLSVIEEQIRDLSENGPTGEELDKARKYLIGSYALRFDTSTKIAGQLVHLQTDGFDVDYLDARNQWIAAVTMD DAKRVCKRLFGDGHLLVAIAGRPENL
Sequences:
>Translated_426_residues MTALATTDAPSRAASVQKVVSKGGIEAWLVEDYAVPLIALECAFKGGAAQDPEGKPGAATLLAGLLDEGAGALDADAFHQ ALDEDAIELSFSADRDVLGGRMQTLSRNAERAFELLRLAVNEARLDAEPFARVTSQMMASLKREANDPDYVAGRTFRALS YPNHPYGLPVRGDLVSLPDLTRNDLLDLRRRLLARDSLKIAVVGAIDAATLGAYLDQAFGDLPAHGDLVAIPDQLFTGEG RRQVVDLDIPQSTIRFGRQGIGRKDPDFIAATVVNHILGGGIFSARLFREVREKRGLAYSVYSQLVTFDHGAMLTGGTST KNERVAESLSVIEEQIRDLSENGPTGEELDKARKYLIGSYALRFDTSTKIAGQLVHLQTDGFDVDYLDARNQWIAAVTMD DAKRVCKRLFGDGHLLVAIAGRPENL >Mature_425_residues TALATTDAPSRAASVQKVVSKGGIEAWLVEDYAVPLIALECAFKGGAAQDPEGKPGAATLLAGLLDEGAGALDADAFHQA LDEDAIELSFSADRDVLGGRMQTLSRNAERAFELLRLAVNEARLDAEPFARVTSQMMASLKREANDPDYVAGRTFRALSY PNHPYGLPVRGDLVSLPDLTRNDLLDLRRRLLARDSLKIAVVGAIDAATLGAYLDQAFGDLPAHGDLVAIPDQLFTGEGR RQVVDLDIPQSTIRFGRQGIGRKDPDFIAATVVNHILGGGIFSARLFREVREKRGLAYSVYSQLVTFDHGAMLTGGTSTK NERVAESLSVIEEQIRDLSENGPTGEELDKARKYLIGSYALRFDTSTKIAGQLVHLQTDGFDVDYLDARNQWIAAVTMDD AKRVCKRLFGDGHLLVAIAGRPENL
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 46122; Mature: 45990
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALATTDAPSRAASVQKVVSKGGIEAWLVEDYAVPLIALECAFKGGAAQDPEGKPGAAT CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCHHHEEEECCCCCCCCCCCCCCHHHH LLAGLLDEGAGALDADAFHQALDEDAIELSFSADRDVLGGRMQTLSRNAERAFELLRLAV HHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH NEARLDAEPFARVTSQMMASLKREANDPDYVAGRTFRALSYPNHPYGLPVRGDLVSLPDL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC TRNDLLDLRRRLLARDSLKIAVVGAIDAATLGAYLDQAFGDLPAHGDLVAIPDQLFTGEG CHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCC RRQVVDLDIPQSTIRFGRQGIGRKDPDFIAATVVNHILGGGIFSARLFREVREKRGLAYS CCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH VYSQLVTFDHGAMLTGGTSTKNERVAESLSVIEEQIRDLSENGPTGEELDKARKYLIGSY HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALRFDTSTKIAGQLVHLQTDGFDVDYLDARNQWIAAVTMDDAKRVCKRLFGDGHLLVAIA EEEECCCCHHCCEEEEEECCCCCEEEECCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEC GRPENL CCCCCC >Mature Secondary Structure TALATTDAPSRAASVQKVVSKGGIEAWLVEDYAVPLIALECAFKGGAAQDPEGKPGAAT CCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCHHHEEEECCCCCCCCCCCCCCHHHH LLAGLLDEGAGALDADAFHQALDEDAIELSFSADRDVLGGRMQTLSRNAERAFELLRLAV HHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH NEARLDAEPFARVTSQMMASLKREANDPDYVAGRTFRALSYPNHPYGLPVRGDLVSLPDL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC TRNDLLDLRRRLLARDSLKIAVVGAIDAATLGAYLDQAFGDLPAHGDLVAIPDQLFTGEG CHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCC RRQVVDLDIPQSTIRFGRQGIGRKDPDFIAATVVNHILGGGIFSARLFREVREKRGLAYS CCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH VYSQLVTFDHGAMLTGGTSTKNERVAESLSVIEEQIRDLSENGPTGEELDKARKYLIGSY HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALRFDTSTKIAGQLVHLQTDGFDVDYLDARNQWIAAVTMDDAKRVCKRLFGDGHLLVAIA EEEECCCCHHCCEEEEEECCCCCEEEECCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEC GRPENL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]