| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is nlpI [C]
Identifier: 182677850
GI number: 182677850
Start: 976521
End: 978239
Strand: Direct
Name: nlpI [C]
Synonym: Bind_0857
Alternate gene names: 182677850
Gene position: 976521-978239 (Clockwise)
Preceding gene: 182677849
Following gene: 182677851
Centisome position: 23.42
GC content: 59.28
Gene sequence:
>1719_bases GTGGCCGTCGCCTGTGCTCTGTTGGTTCCAGCCCCCTTGGCGCTGGCACGGGCCCGTGAAAGCCTGGCCATAGCGACACC TTTCGAGGTCGGTGACAGCCCGATCGGCAATTATCTCGCTGCCTATGTCGCAGGCATCGATAAGGACACGCTCGCGGCAG CCACCTATTTTCGCGAAGCCTTGCGTTATGATCCGCATAATTCGGCTTTGATCGAGCGGGCTTTTGTCGCCGCGATTTCG AACGGCAACATGCAGGATGCGTTTGGTTTCGCGGATCGTCTGCTCGCGCGTGATCCCGGTAACGGCCTTGCCCATCTCGC CTTGGGCGTCAAGGCGATCAAGCAGCATCAATATGCGGCCGCGCGCAATCATTTCGCGCGGGGCGGCGCTGGGCACGAAC GCGATATTACCGCGACGCTTCTTGCGGCCTGGACCTATGCAGGCAGTGGAGAATACAAGCGCGGGCTTGAACTGGTCGAT CGCCTGCATGATGAAAGCTTCGGCGTGTTTCGCGATTTCCACGGCGGCTTGATCGCCGATGTCGCGCATAATCCAACCGA AGCGGCGCGTCGGCTGAAGGCCTCCTATGATACCGACAAGAACACTTTGCGGCTTGTCGATGTCTATGCGCGATTCCTGG CGCTGCATGGCCGCCGTGACGAAGCGATCAAGGTCTATGAGGCCTTCGACGAGATTCTGCCCAATCATCCGATCATCAGC GCCGCGCTTGCCACGTTGAAGAGCGGCAAGACGCTCGAGTCGCCGGTGCGCACACCGGAGGAGGGCGCTGCCGAAGTGCT CTATGGCCTGGGTGCCGCCGGCAGCCGGCAAGGCGACGAACTGGCCGCGATGATCTATCTTCGTCTATCGCTGTTTCTCG CGCCCGAGAACAGCCTCGCCATCATTACGCTTGGCGATATTTATGAACGCATCAAGCAGAACGAGCGGGCGATCGACGTC TATGAAACCGTGCCCGACGATGATCCCTTGCGGATTACTGCCGATATCCAGTCCGGACAGATTCTCGAAGCCCTCGGCCG CACCGAGGAGGCGAACAAATATCTGAAACGAATCGTCGAGGAACATCCGAAGGATAGCGATGCTTTATCGGCGCTCGGCA ATCTGCAGCGCGCCCATAAGCAATATGCCGAGGCCATCGAAACCTATACTCAGGCGCTCGCCGCCACGAGCAAGCCGGAA AAGGCCAATTGGCCGCTCTATTATTTCCGTGGCATTTCCTATGAGCGTAACAAGCAATGGCCGCAGGCGGAGGCCGATTT CCGCCGCGCCCTGGCTTTGTTCCCGGACCAGCCTCTGGTGCTGAATTATCTTGGTTATAGCTGGGTCGATCAGGGACTCA ATCTCGACGAGGCCTTTGCCATGCTGCACAAGGCCGTGGAATTGCGGCCGACCGACGGTTATATCGTCGACAGTCTTGGC TGGGCCAATTACCGGCTGGGCCGCTATGACGAGGCGGTCAAGGAACTCGAGCGGGCCATTGATCTGAAGCCTTCCGATCC GGTCATCAATGATCATTTGGGTGATGCCTATTGGCGGGTCGGGCGCAAGCTCGAAGCTCATTTCCAATGGAACCATGCGC GTGATCTTGGGCCCGAGCCCGAGGACAAGGACAAGATCCTGGCCAAGATTGAGCACGGGCTTGATGACGAAGAAAAGCCC GCCGCCGCCGAGGCTCGCCCCGCCAAAAACGGGGGATGA
Upstream 100 bases:
>100_bases GCCTGTACTCACACGGAAAGACGATCGCGTGTCCTTCACATTTTCTTCTGCACCGTTTCGCTCTCTCGCATCGTACCGTT TTTTGCCGCGCGGATTGTCC
Downstream 100 bases:
>100_bases AGGTTCAGGCCTAATATCCACCCTCATTGAAGCGGGCCTCGTCGCGGTTCAATGAGGACAAGTGGATAAGTTTAAAAAGT GACGTATCGAGAATCCGTGA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MAVACALLVPAPLALARARESLAIATPFEVGDSPIGNYLAAYVAGIDKDTLAAATYFREALRYDPHNSALIERAFVAAIS NGNMQDAFGFADRLLARDPGNGLAHLALGVKAIKQHQYAAARNHFARGGAGHERDITATLLAAWTYAGSGEYKRGLELVD RLHDESFGVFRDFHGGLIADVAHNPTEAARRLKASYDTDKNTLRLVDVYARFLALHGRRDEAIKVYEAFDEILPNHPIIS AALATLKSGKTLESPVRTPEEGAAEVLYGLGAAGSRQGDELAAMIYLRLSLFLAPENSLAIITLGDIYERIKQNERAIDV YETVPDDDPLRITADIQSGQILEALGRTEEANKYLKRIVEEHPKDSDALSALGNLQRAHKQYAEAIETYTQALAATSKPE KANWPLYYFRGISYERNKQWPQAEADFRRALALFPDQPLVLNYLGYSWVDQGLNLDEAFAMLHKAVELRPTDGYIVDSLG WANYRLGRYDEAVKELERAIDLKPSDPVINDHLGDAYWRVGRKLEAHFQWNHARDLGPEPEDKDKILAKIEHGLDDEEKP AAAEARPAKNGG
Sequences:
>Translated_572_residues MAVACALLVPAPLALARARESLAIATPFEVGDSPIGNYLAAYVAGIDKDTLAAATYFREALRYDPHNSALIERAFVAAIS NGNMQDAFGFADRLLARDPGNGLAHLALGVKAIKQHQYAAARNHFARGGAGHERDITATLLAAWTYAGSGEYKRGLELVD RLHDESFGVFRDFHGGLIADVAHNPTEAARRLKASYDTDKNTLRLVDVYARFLALHGRRDEAIKVYEAFDEILPNHPIIS AALATLKSGKTLESPVRTPEEGAAEVLYGLGAAGSRQGDELAAMIYLRLSLFLAPENSLAIITLGDIYERIKQNERAIDV YETVPDDDPLRITADIQSGQILEALGRTEEANKYLKRIVEEHPKDSDALSALGNLQRAHKQYAEAIETYTQALAATSKPE KANWPLYYFRGISYERNKQWPQAEADFRRALALFPDQPLVLNYLGYSWVDQGLNLDEAFAMLHKAVELRPTDGYIVDSLG WANYRLGRYDEAVKELERAIDLKPSDPVINDHLGDAYWRVGRKLEAHFQWNHARDLGPEPEDKDKILAKIEHGLDDEEKP AAAEARPAKNGG >Mature_571_residues AVACALLVPAPLALARARESLAIATPFEVGDSPIGNYLAAYVAGIDKDTLAAATYFREALRYDPHNSALIERAFVAAISN GNMQDAFGFADRLLARDPGNGLAHLALGVKAIKQHQYAAARNHFARGGAGHERDITATLLAAWTYAGSGEYKRGLELVDR LHDESFGVFRDFHGGLIADVAHNPTEAARRLKASYDTDKNTLRLVDVYARFLALHGRRDEAIKVYEAFDEILPNHPIISA ALATLKSGKTLESPVRTPEEGAAEVLYGLGAAGSRQGDELAAMIYLRLSLFLAPENSLAIITLGDIYERIKQNERAIDVY ETVPDDDPLRITADIQSGQILEALGRTEEANKYLKRIVEEHPKDSDALSALGNLQRAHKQYAEAIETYTQALAATSKPEK ANWPLYYFRGISYERNKQWPQAEADFRRALALFPDQPLVLNYLGYSWVDQGLNLDEAFAMLHKAVELRPTDGYIVDSLGW ANYRLGRYDEAVKELERAIDLKPSDPVINDHLGDAYWRVGRKLEAHFQWNHARDLGPEPEDKDKILAKIEHGLDDEEKPA AAEARPAKNGG
Specific function: May Be Involved In Cell Division. Overexpression Of Nlpi Results In The Loss Of The Rod Morphology And The Formation Of Single Prolate Ellipsoids And Pairs Of Prolate Ellipsoids Joined By Partial Constrictions. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 63265; Mature: 63134
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVACALLVPAPLALARARESLAIATPFEVGDSPIGNYLAAYVAGIDKDTLAAATYFREA CCEEEHHHHCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LRYDPHNSALIERAFVAAISNGNMQDAFGFADRLLARDPGNGLAHLALGVKAIKQHQYAA HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARNHFARGGAGHERDITATLLAAWTYAGSGEYKRGLELVDRLHDESFGVFRDFHGGLIAD HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEEH VAHNPTEAARRLKASYDTDKNTLRLVDVYARFLALHGRRDEAIKVYEAFDEILPNHPIIS HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH AALATLKSGKTLESPVRTPEEGAAEVLYGLGAAGSRQGDELAAMIYLRLSLFLAPENSLA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE IITLGDIYERIKQNERAIDVYETVPDDDPLRITADIQSGQILEALGRTEEANKYLKRIVE EEEHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHH EHPKDSDALSALGNLQRAHKQYAEAIETYTQALAATSKPEKANWPLYYFRGISYERNKQW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC PQAEADFRRALALFPDQPLVLNYLGYSWVDQGLNLDEAFAMLHKAVELRPTDGYIVDSLG CCHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC WANYRLGRYDEAVKELERAIDLKPSDPVINDHLGDAYWRVGRKLEAHFQWNHARDLGPEP CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHEEEEEECCHHCCCCCC EDKDKILAKIEHGLDDEEKPAAAEARPAKNGG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVACALLVPAPLALARARESLAIATPFEVGDSPIGNYLAAYVAGIDKDTLAAATYFREA CEEEHHHHCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LRYDPHNSALIERAFVAAISNGNMQDAFGFADRLLARDPGNGLAHLALGVKAIKQHQYAA HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARNHFARGGAGHERDITATLLAAWTYAGSGEYKRGLELVDRLHDESFGVFRDFHGGLIAD HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCEEEH VAHNPTEAARRLKASYDTDKNTLRLVDVYARFLALHGRRDEAIKVYEAFDEILPNHPIIS HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH AALATLKSGKTLESPVRTPEEGAAEVLYGLGAAGSRQGDELAAMIYLRLSLFLAPENSLA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE IITLGDIYERIKQNERAIDVYETVPDDDPLRITADIQSGQILEALGRTEEANKYLKRIVE EEEHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHH EHPKDSDALSALGNLQRAHKQYAEAIETYTQALAATSKPEKANWPLYYFRGISYERNKQW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC PQAEADFRRALALFPDQPLVLNYLGYSWVDQGLNLDEAFAMLHKAVELRPTDGYIVDSLG CCHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC WANYRLGRYDEAVKELERAIDLKPSDPVINDHLGDAYWRVGRKLEAHFQWNHARDLGPEP CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHEEEEEECCHHCCCCCC EDKDKILAKIEHGLDDEEKPAAAEARPAKNGG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]