| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677849
Identifier: 182677849
GI number: 182677849
Start: 974950
End: 976182
Strand: Direct
Name: 182677849
Synonym: Bind_0856
Alternate gene names: NA
Gene position: 974950-976182 (Clockwise)
Preceding gene: 182677848
Following gene: 182677850
Centisome position: 23.38
GC content: 62.29
Gene sequence:
>1233_bases ATGGGAATCGTCGCACCATGGTGCTTGGCCATGGGCTTGCTCGTCTCGATCAGTGCCGATGCTGGCCAGGAGGCCGTCAT GGGAGGGTCCATCGTGGCCTTGTCCCAACGGGCGGCTGTCAGCCCCACCACGCTTGTGCCGGATCTGCCGCTTGATTCAT TGACAGCTTCCCCGAGGCTATCGCGGAATTTCGCCGCGGTCGCGGCTTTGCGGCAGGTCAGCCTCGAATTGGGCGAGAAG CAGGATTTTAGCGAATGGGCCGATGAGATCGAGCCGCGCCCCGATCTGAAACGGAGTGGACGGGCTTCCGCGTCAAAGGC CATGCCGGTCATCGATCGTAGCCGAAAGGGCGATCCCCTGGTGGGGCTGCGGCCGACTTTCGATACGCAGTTGCGCCAGA AAGGCGGGCTTGCCAAGCTACGTGCGCATGATCTGTTGTTCACCCATGATGAAACCTCCCCAACGGGTGGCTTTTCGCCA GCCGAGGGTGATGTCGAGGGGCCGGAGAGCGTGGCCTCTTTCGAGCCCTGGCCGGATGGCGAAAGCCCCACGACTGTCCA TGCCGCTGGCGATGCCTCACCTGCGGCGACCGGGAGCACGACGACGCGCGCCACTGTCGCCATGCGCCCGAGCGCCCTCA ACGAGCGCTTGATGCAGGGCGCGACTCCGGCAACGCCCCGCGCCTTGGCCTTGGCTTCGACGACGCCAGCGCCTGCCGAG GCGACACCTGTAGAAGTCGTGTTCCAGCGCTCCAAAAATGCGCCCGAAACCAGTTACGCCGAGCGGCAGAAGCCGAATTA TGCGGCGCTCATCAGTCAGGATCGTGCGGGCAGCGAAAAGCGCTGCCTTGCCGAAGCGATTTATTTCGAGGCGCGCAGCG AGCCCGAGGAAGGGCAGGCGGCGGTCGCGCAGGTCGTGCTCAACCGCGTTTCAAGCGGGCTTTATCCTGCCTCCATCTGC GGCGTCGTTTATCAGAATCGGCAGCATTATCATGGCTGCCAGTTCTCATTCGCCTGCGAGGGAAAATCTCTCAAGATCAC CGAGCCCGATGCCTGGCGCACGGCGCTTAAAGTGGCGGATTCTGTGACCGAGGGGCGCACCTATCTTGCCGATATCGGTG GTTCCACGCATTATCACGCGAATTATGTGCGGCCCCGCTGGGCCAAGGCCCTAAAAAAGATGGATGTGATCGGGCACCAT ATCTTCTATAAATTACGCCCTGGGCAGACGTGA
Upstream 100 bases:
>100_bases CGCAAGCATAAATAGCGATAACCATTTCCGGATGATGATGTGGCCTCGCCACAAGATCGAATTGGGATGGGTAATGCGCG GGTCGCAGGTCGGATGGGCA
Downstream 100 bases:
>100_bases GTCCGATTGGCCCGTGATGCCTTTTAACAAGACACATTCATGGGAAGAGCCGATCGCCGGATTTCGCCGGAGACAGCTTT GGCTTAAGATTGGTTTTGAT
Product: cell wall hydrolase SleB
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGIVAPWCLAMGLLVSISADAGQEAVMGGSIVALSQRAAVSPTTLVPDLPLDSLTASPRLSRNFAAVAALRQVSLELGEK QDFSEWADEIEPRPDLKRSGRASASKAMPVIDRSRKGDPLVGLRPTFDTQLRQKGGLAKLRAHDLLFTHDETSPTGGFSP AEGDVEGPESVASFEPWPDGESPTTVHAAGDASPAATGSTTTRATVAMRPSALNERLMQGATPATPRALALASTTPAPAE ATPVEVVFQRSKNAPETSYAERQKPNYAALISQDRAGSEKRCLAEAIYFEARSEPEEGQAAVAQVVLNRVSSGLYPASIC GVVYQNRQHYHGCQFSFACEGKSLKITEPDAWRTALKVADSVTEGRTYLADIGGSTHYHANYVRPRWAKALKKMDVIGHH IFYKLRPGQT
Sequences:
>Translated_410_residues MGIVAPWCLAMGLLVSISADAGQEAVMGGSIVALSQRAAVSPTTLVPDLPLDSLTASPRLSRNFAAVAALRQVSLELGEK QDFSEWADEIEPRPDLKRSGRASASKAMPVIDRSRKGDPLVGLRPTFDTQLRQKGGLAKLRAHDLLFTHDETSPTGGFSP AEGDVEGPESVASFEPWPDGESPTTVHAAGDASPAATGSTTTRATVAMRPSALNERLMQGATPATPRALALASTTPAPAE ATPVEVVFQRSKNAPETSYAERQKPNYAALISQDRAGSEKRCLAEAIYFEARSEPEEGQAAVAQVVLNRVSSGLYPASIC GVVYQNRQHYHGCQFSFACEGKSLKITEPDAWRTALKVADSVTEGRTYLADIGGSTHYHANYVRPRWAKALKKMDVIGHH IFYKLRPGQT >Mature_409_residues GIVAPWCLAMGLLVSISADAGQEAVMGGSIVALSQRAAVSPTTLVPDLPLDSLTASPRLSRNFAAVAALRQVSLELGEKQ DFSEWADEIEPRPDLKRSGRASASKAMPVIDRSRKGDPLVGLRPTFDTQLRQKGGLAKLRAHDLLFTHDETSPTGGFSPA EGDVEGPESVASFEPWPDGESPTTVHAAGDASPAATGSTTTRATVAMRPSALNERLMQGATPATPRALALASTTPAPAEA TPVEVVFQRSKNAPETSYAERQKPNYAALISQDRAGSEKRCLAEAIYFEARSEPEEGQAAVAQVVLNRVSSGLYPASICG VVYQNRQHYHGCQFSFACEGKSLKITEPDAWRTALKVADSVTEGRTYLADIGGSTHYHANYVRPRWAKALKKMDVIGHHI FYKLRPGQT
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43908; Mature: 43777
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVAPWCLAMGLLVSISADAGQEAVMGGSIVALSQRAAVSPTTLVPDLPLDSLTASPRL CCCCCHHHHHHHHHHEECCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCH SRNFAAVAALRQVSLELGEKQDFSEWADEIEPRPDLKRSGRASASKAMPVIDRSRKGDPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCHHHCCCCHHCCCCCCCC VGLRPTFDTQLRQKGGLAKLRAHDLLFTHDETSPTGGFSPAEGDVEGPESVASFEPWPDG EECCCCHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC ESPTTVHAAGDASPAATGSTTTRATVAMRPSALNERLMQGATPATPRALALASTTPAPAE CCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCC ATPVEVVFQRSKNAPETSYAERQKPNYAALISQDRAGSEKRCLAEAIYFEARSEPEEGQA CCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH AVAQVVLNRVSSGLYPASICGVVYQNRQHYHGCQFSFACEGKSLKITEPDAWRTALKVAD HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHH SVTEGRTYLADIGGSTHYHANYVRPRWAKALKKMDVIGHHIFYKLRPGQT HHHCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCC >Mature Secondary Structure GIVAPWCLAMGLLVSISADAGQEAVMGGSIVALSQRAAVSPTTLVPDLPLDSLTASPRL CCCCHHHHHHHHHHEECCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCH SRNFAAVAALRQVSLELGEKQDFSEWADEIEPRPDLKRSGRASASKAMPVIDRSRKGDPL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCHHHCCCCHHCCCCCCCC VGLRPTFDTQLRQKGGLAKLRAHDLLFTHDETSPTGGFSPAEGDVEGPESVASFEPWPDG EECCCCHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC ESPTTVHAAGDASPAATGSTTTRATVAMRPSALNERLMQGATPATPRALALASTTPAPAE CCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCC ATPVEVVFQRSKNAPETSYAERQKPNYAALISQDRAGSEKRCLAEAIYFEARSEPEEGQA CCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHH AVAQVVLNRVSSGLYPASICGVVYQNRQHYHGCQFSFACEGKSLKITEPDAWRTALKVAD HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHH SVTEGRTYLADIGGSTHYHANYVRPRWAKALKKMDVIGHHIFYKLRPGQT HHHCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA