Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is 182677799

Identifier: 182677799

GI number: 182677799

Start: 896991

End: 898514

Strand: Direct

Name: 182677799

Synonym: Bind_0806

Alternate gene names: NA

Gene position: 896991-898514 (Clockwise)

Preceding gene: 182677798

Following gene: 182677801

Centisome position: 21.51

GC content: 62.8

Gene sequence:

>1524_bases
ATGAGCAAGCGGTTCGATTGGGACGCGCGAAACAATAATGGCCGCGACGCCAATGGCTTGGAACTGGATTTCCATGCCTT
GTGGCAGGCTGTCTTGCGCCAGAAATGGCGGCTGGTCACGCCGGCTTTGGTCGTTCTTGCCGTACTCGGCTTGTGGCTGG
CCTTGGTGCCGCCCCGCTATACAGCGGTGGCGCGGGTTGCCGGGGTGGCGCCGGAGAATGGGCTCGAAAGCCCGTTGGAC
GGGGTGACATTGGCGCGCGCCTCCTCACAGGACGCGCCGCAGTCCGTTTTGGAGCCGAAGGCTCTGAAAAATCAACTCCT
TTTGCTTTCCTCCGAGGATTTCGCCCGCCGCGCCCTTTCGGAATTGCGCGACAGCGGGGATCTGCCGACGAGCGTTGAGC
TTGCCGATCTGGAAAATGGCGCCGTCTCTGCCAGGACAGGGCAGGCTTTACGGCCGCTGTTACGACGGATCGGTTTCCAG
GCCGCTGCGGAATCCGCCCCCGACAGCCTTCTCCTTGACTGGCTGCGTCGCGGGCTGGCGATCAAGGTGCGTGAAGGAAC
GAGCGATCTTTCCATCACTTTCGAGGCCGAGGATGCCGGGCTTGCGGCCAAGGTCGCCAATAAATATGCCGAGCTCTATC
TCGACCTGCAGCCCTCCGCGAATAGCGTCGCGGCGGCTGTGGCAGCGCGGCAGTCCGCTTTCCCGCATCACCCTTCCGTG
CTGGTGCTGGGTCCTCTGGCGACTTTGATGATCGGTTTCGCGGCCCTCTTTGCCAGGGAATATCGGGCAGGACGCTTGGC
GCCGGCGAGCGCCGCCATGCTCCAGCAGCCGCGCGCCCTTGGCGAAATCAAATTATTCGCGCGTTTCGATGAAAGACCTT
CGGCCGAAGGGCCGGGTGGCCTTTATCCTCTCCCATCACCGCAGGCAAATGAGATGGCGGATGCGGCCGAGATTGCCGTG
CGCATTCGCAAAAGCCGGCGGGATGACCTTGCGACCCACATCGTCGTGACGGGAGTCAATCTCGCTGGCAAAAGTGCGCG
GCCGATGATCGGCCTTGGCCGCCAATTGGCCCAGGAAGGCCGCACAATTCTCGTCGATCTCGACGGCGCCTGGCAGGGGG
AAAATCCCGCCTCCGACAAGGTTGAGGAAAAGCCAGGCCTTGCGGAAGTGCTGGACGGGCAGGCCTCCTTCGCCGAAGCC
ATTCGGCGCGATCCGGCCTCGCGCCTGCATATTCTGCTCGCTGAGCCGGACCGGTCTTTCGACCTGCGCGCCTTCGATGT
CGTGTTCGAGGCCTTGTCGCAAACCTATGATTTTGTCCTGGTCACCGCGCCGCCGCTGGATCAAAGCCCGCTCGCCAGCA
GACTCACCGCCAAGGCGAATCTCGTGATTCTGGCGACGCTCGCGCAGCATGAGCGCCTGATTGAATCCGCCCATGCGGAT
TTGCGGCAAAATACGGGCTGTGAAGTGCTCGTCATCGGGGTCGGCGGCAGGCTCATGCCGCGCCTCGTTGAAAATGCAGC
ATGA

Upstream 100 bases:

>100_bases
TTTGGCCACAGGGTTTTATGAAATGTCGTTTATTTTATCTTTGTTAACCTTGCGGCAACCTTAAACCTTTTTGATAGCGT
CACCCGAATTCGAGGTGGCG

Downstream 100 bases:

>100_bases
AATCTAGAGCATCAGCCCCAAAAGTGGCTCCCACTTTTGGGGCTGATGCGTTTTCAAAAAGATAGAGCATTGGGCAGGGT
TCAATTTGAAAGTCCGATGC

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MSKRFDWDARNNNGRDANGLELDFHALWQAVLRQKWRLVTPALVVLAVLGLWLALVPPRYTAVARVAGVAPENGLESPLD
GVTLARASSQDAPQSVLEPKALKNQLLLLSSEDFARRALSELRDSGDLPTSVELADLENGAVSARTGQALRPLLRRIGFQ
AAAESAPDSLLLDWLRRGLAIKVREGTSDLSITFEAEDAGLAAKVANKYAELYLDLQPSANSVAAAVAARQSAFPHHPSV
LVLGPLATLMIGFAALFAREYRAGRLAPASAAMLQQPRALGEIKLFARFDERPSAEGPGGLYPLPSPQANEMADAAEIAV
RIRKSRRDDLATHIVVTGVNLAGKSARPMIGLGRQLAQEGRTILVDLDGAWQGENPASDKVEEKPGLAEVLDGQASFAEA
IRRDPASRLHILLAEPDRSFDLRAFDVVFEALSQTYDFVLVTAPPLDQSPLASRLTAKANLVILATLAQHERLIESAHAD
LRQNTGCEVLVIGVGGRLMPRLVENAA

Sequences:

>Translated_507_residues
MSKRFDWDARNNNGRDANGLELDFHALWQAVLRQKWRLVTPALVVLAVLGLWLALVPPRYTAVARVAGVAPENGLESPLD
GVTLARASSQDAPQSVLEPKALKNQLLLLSSEDFARRALSELRDSGDLPTSVELADLENGAVSARTGQALRPLLRRIGFQ
AAAESAPDSLLLDWLRRGLAIKVREGTSDLSITFEAEDAGLAAKVANKYAELYLDLQPSANSVAAAVAARQSAFPHHPSV
LVLGPLATLMIGFAALFAREYRAGRLAPASAAMLQQPRALGEIKLFARFDERPSAEGPGGLYPLPSPQANEMADAAEIAV
RIRKSRRDDLATHIVVTGVNLAGKSARPMIGLGRQLAQEGRTILVDLDGAWQGENPASDKVEEKPGLAEVLDGQASFAEA
IRRDPASRLHILLAEPDRSFDLRAFDVVFEALSQTYDFVLVTAPPLDQSPLASRLTAKANLVILATLAQHERLIESAHAD
LRQNTGCEVLVIGVGGRLMPRLVENAA
>Mature_506_residues
SKRFDWDARNNNGRDANGLELDFHALWQAVLRQKWRLVTPALVVLAVLGLWLALVPPRYTAVARVAGVAPENGLESPLDG
VTLARASSQDAPQSVLEPKALKNQLLLLSSEDFARRALSELRDSGDLPTSVELADLENGAVSARTGQALRPLLRRIGFQA
AAESAPDSLLLDWLRRGLAIKVREGTSDLSITFEAEDAGLAAKVANKYAELYLDLQPSANSVAAAVAARQSAFPHHPSVL
VLGPLATLMIGFAALFAREYRAGRLAPASAAMLQQPRALGEIKLFARFDERPSAEGPGGLYPLPSPQANEMADAAEIAVR
IRKSRRDDLATHIVVTGVNLAGKSARPMIGLGRQLAQEGRTILVDLDGAWQGENPASDKVEEKPGLAEVLDGQASFAEAI
RRDPASRLHILLAEPDRSFDLRAFDVVFEALSQTYDFVLVTAPPLDQSPLASRLTAKANLVILATLAQHERLIESAHADL
RQNTGCEVLVIGVGGRLMPRLVENAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54556; Mature: 54425

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRFDWDARNNNGRDANGLELDFHALWQAVLRQKWRLVTPALVVLAVLGLWLALVPPRY
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TAVARVAGVAPENGLESPLDGVTLARASSQDAPQSVLEPKALKNQLLLLSSEDFARRALS
HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHCCEEEECCCHHHHHHHH
ELRDSGDLPTSVELADLENGAVSARTGQALRPLLRRIGFQAAAESAPDSLLLDWLRRGLA
HHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHCCCE
IKVREGTSDLSITFEAEDAGLAAKVANKYAELYLDLQPSANSVAAAVAARQSAFPHHPSV
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCE
LVLGPLATLMIGFAALFAREYRAGRLAPASAAMLQQPRALGEIKLFARFDERPSAEGPGG
EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCC
LYPLPSPQANEMADAAEIAVRIRKSRRDDLATHIVVTGVNLAGKSARPMIGLGRQLAQEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCC
RTILVDLDGAWQGENPASDKVEEKPGLAEVLDGQASFAEAIRRDPASRLHILLAEPDRSF
CEEEEEECCCCCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCC
DLRAFDVVFEALSQTYDFVLVTAPPLDQSPLASRLTAKANLVILATLAQHERLIESAHAD
CHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
LRQNTGCEVLVIGVGGRLMPRLVENAA
HHCCCCCEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure 
SKRFDWDARNNNGRDANGLELDFHALWQAVLRQKWRLVTPALVVLAVLGLWLALVPPRY
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TAVARVAGVAPENGLESPLDGVTLARASSQDAPQSVLEPKALKNQLLLLSSEDFARRALS
HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHCCEEEECCCHHHHHHHH
ELRDSGDLPTSVELADLENGAVSARTGQALRPLLRRIGFQAAAESAPDSLLLDWLRRGLA
HHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHCCCE
IKVREGTSDLSITFEAEDAGLAAKVANKYAELYLDLQPSANSVAAAVAARQSAFPHHPSV
EEEECCCCCEEEEEECCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCE
LVLGPLATLMIGFAALFAREYRAGRLAPASAAMLQQPRALGEIKLFARFDERPSAEGPGG
EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCC
LYPLPSPQANEMADAAEIAVRIRKSRRDDLATHIVVTGVNLAGKSARPMIGLGRQLAQEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCC
RTILVDLDGAWQGENPASDKVEEKPGLAEVLDGQASFAEAIRRDPASRLHILLAEPDRSF
CEEEEEECCCCCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCC
DLRAFDVVFEALSQTYDFVLVTAPPLDQSPLASRLTAKANLVILATLAQHERLIESAHAD
CHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
LRQNTGCEVLVIGVGGRLMPRLVENAA
HHCCCCCEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA