| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is folD1 [H]
Identifier: 182677798
GI number: 182677798
Start: 895903
End: 896865
Strand: Direct
Name: folD1 [H]
Synonym: Bind_0805
Alternate gene names: 182677798
Gene position: 895903-896865 (Clockwise)
Preceding gene: 182677797
Following gene: 182677799
Centisome position: 21.48
GC content: 60.75
Gene sequence:
>963_bases ATGGGAATGGAGACGAAAACCGGGGTTTTGGACGAGACTGGAATTCTACGCCCTTCCACTGGCAGCGCTCTCCTGATCGA TGGCAAACGCGCATCCGAGCGGATGTTGGCCTCCATCGCCGAAAAAGCCCAAATCCTTATCAATGGCGGCATCAAGCCGG GACTCGCCGTCATTCTGGTCGGGGAGGATCCAGCGAGCCAGGTCTATGTCAAATCGAAGGGCCATACGGCCGTGGCCTGC GGCTTCCATTCGGTGCAGCATGATCTGCCGGTCTCGACCACCGAGGAGGAAATTCTCGACCTTATCGCAAGGCTCAACGC TGATCCGACGATTCATGGCATTTTGATGCAATTGCCCTTGCCGGGCGGCGCCGATCCCACAAGGATCATCGAATCGATCG CGCCCTCCAAGGATGTCGATGGGCTGCATCCGCTCAATGCCGGACTTTTGGCAGTCGGGAATTTTCACCGCGCACTCATT CCCTGCACGCCGGCTGGATGTGTGCATCTGCTTGATCAGACAGCGGCGGAGCTCGGCGTTGATCTGGCCGGGGCGGAAGC GGTTGTCGTCGGCCGATCCAATCTCGTCGGGAAGCCGATCGCTCAATTGCTGCTTGCCCGCAATGCGACCGTGACCCTGG CGCATTCGAAAAGCCGGGATTTGCCCGCTATCATCAGCCGCGCCGATCTTCTCGTCGCCGCGGTCGGGCGGCCGGAAATG ATCCGTGGGAACTGGATCAAGCCCGGTGCCATCGTCCTTGATGTCGGCATTAATCGCCTGCCGGCTGAGGGATTAACCGC TTCCGGCAAGCCAAAGAGCCGGCTCGTCGGCGATGTCGCGCGCGAGGAGGCGTTGACACGCGCGGCCGCTATCACGCCCG TGCCGGGTGGCGTCGGCCCCATGACGATTGCCATGTTGATGGCCAATACATTGCGCGCGGCTGAAGCTTACGCTGGTCTA TAG
Upstream 100 bases:
>100_bases AGGGGATATCCCTTTCCGGTTCGATGCTCTAGAAACGCCGCATCTTTTCCATTCTCCCGCGCGGAGGATGGATGTTTGGA TACGGCCGGAGGCGGGACGC
Downstream 100 bases:
>100_bases AGGCGACTTGCGAGGATAGTCGCTTTTTGGCCACAGGGTTTTATGAAATGTCGTTTATTTTATCTTTGTTAACCTTGCGG CAACCTTAAACCTTTTTGAT
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MGMETKTGVLDETGILRPSTGSALLIDGKRASERMLASIAEKAQILINGGIKPGLAVILVGEDPASQVYVKSKGHTAVAC GFHSVQHDLPVSTTEEEILDLIARLNADPTIHGILMQLPLPGGADPTRIIESIAPSKDVDGLHPLNAGLLAVGNFHRALI PCTPAGCVHLLDQTAAELGVDLAGAEAVVVGRSNLVGKPIAQLLLARNATVTLAHSKSRDLPAIISRADLLVAAVGRPEM IRGNWIKPGAIVLDVGINRLPAEGLTASGKPKSRLVGDVAREEALTRAAAITPVPGGVGPMTIAMLMANTLRAAEAYAGL
Sequences:
>Translated_320_residues MGMETKTGVLDETGILRPSTGSALLIDGKRASERMLASIAEKAQILINGGIKPGLAVILVGEDPASQVYVKSKGHTAVAC GFHSVQHDLPVSTTEEEILDLIARLNADPTIHGILMQLPLPGGADPTRIIESIAPSKDVDGLHPLNAGLLAVGNFHRALI PCTPAGCVHLLDQTAAELGVDLAGAEAVVVGRSNLVGKPIAQLLLARNATVTLAHSKSRDLPAIISRADLLVAAVGRPEM IRGNWIKPGAIVLDVGINRLPAEGLTASGKPKSRLVGDVAREEALTRAAAITPVPGGVGPMTIAMLMANTLRAAEAYAGL >Mature_319_residues GMETKTGVLDETGILRPSTGSALLIDGKRASERMLASIAEKAQILINGGIKPGLAVILVGEDPASQVYVKSKGHTAVACG FHSVQHDLPVSTTEEEILDLIARLNADPTIHGILMQLPLPGGADPTRIIESIAPSKDVDGLHPLNAGLLAVGNFHRALIP CTPAGCVHLLDQTAAELGVDLAGAEAVVVGRSNLVGKPIAQLLLARNATVTLAHSKSRDLPAIISRADLLVAAVGRPEMI RGNWIKPGAIVLDVGINRLPAEGLTASGKPKSRLVGDVAREEALTRAAAITPVPGGVGPMTIAMLMANTLRAAEAYAGL
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=300, Percent_Identity=46, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI222418558, Length=307, Percent_Identity=40.0651465798046, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI94721354, Length=306, Percent_Identity=40.8496732026144, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI36796743, Length=275, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=4e-21, Organism=Escherichia coli, GI1786741, Length=299, Percent_Identity=48.8294314381271, Blast_Score=263, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17568735, Length=264, Percent_Identity=43.1818181818182, Blast_Score=198, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=44.4444444444444, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6321643, Length=302, Percent_Identity=42.0529801324503, Blast_Score=225, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6322933, Length=292, Percent_Identity=27.0547945205479, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI62472483, Length=267, Percent_Identity=49.812734082397, Blast_Score=245, Evalue=2e-65, Organism=Drosophila melanogaster, GI45551871, Length=267, Percent_Identity=49.812734082397, Blast_Score=245, Evalue=2e-65, Organism=Drosophila melanogaster, GI24645718, Length=267, Percent_Identity=49.812734082397, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI17137370, Length=267, Percent_Identity=49.812734082397, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI17136816, Length=310, Percent_Identity=42.9032258064516, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI17136818, Length=303, Percent_Identity=43.5643564356436, Blast_Score=202, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 33046; Mature: 32915
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMETKTGVLDETGILRPSTGSALLIDGKRASERMLASIAEKAQILINGGIKPGLAVILV CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEECCCCCCEEEEEE GEDPASQVYVKSKGHTAVACGFHSVQHDLPVSTTEEEILDLIARLNADPTIHGILMQLPL CCCCCCEEEEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECC PGGADPTRIIESIAPSKDVDGLHPLNAGLLAVGNFHRALIPCTPAGCVHLLDQTAAELGV CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHCC DLAGAEAVVVGRSNLVGKPIAQLLLARNATVTLAHSKSRDLPAIISRADLLVAAVGRPEM EECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEEEEECCCCCE IRGNWIKPGAIVLDVGINRLPAEGLTASGKPKSRLVGDVAREEALTRAAAITPVPGGVGP ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MTIAMLMANTLRAAEAYAGL HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GMETKTGVLDETGILRPSTGSALLIDGKRASERMLASIAEKAQILINGGIKPGLAVILV CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEECCCCCCEEEEEE GEDPASQVYVKSKGHTAVACGFHSVQHDLPVSTTEEEILDLIARLNADPTIHGILMQLPL CCCCCCEEEEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECC PGGADPTRIIESIAPSKDVDGLHPLNAGLLAVGNFHRALIPCTPAGCVHLLDQTAAELGV CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHCC DLAGAEAVVVGRSNLVGKPIAQLLLARNATVTLAHSKSRDLPAIISRADLLVAAVGRPEM EECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEEEEECCCCCE IRGNWIKPGAIVLDVGINRLPAEGLTASGKPKSRLVGDVAREEALTRAAAITPVPGGVGP ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MTIAMLMANTLRAAEAYAGL HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]