Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is 182677750

Identifier: 182677750

GI number: 182677750

Start: 850406

End: 851038

Strand: Direct

Name: 182677750

Synonym: Bind_0757

Alternate gene names: NA

Gene position: 850406-851038 (Clockwise)

Preceding gene: 182677746

Following gene: 182677751

Centisome position: 20.39

GC content: 56.87

Gene sequence:

>633_bases
ATGAAAAATGCCCCGTCGACAGCGTCTATCTCACCGTCCGAGAAACGTAGCGTTTTCCAAAGGCTTTACGATTGGACCTT
GAGTCTTGCGGAGAGCCGTCACGCGCCCTTGGCCCTTGGCCTCGTCGCTTTCGCGGAGAGTTCCTTCTTTCCGATTCCGC
CCGATGCCCTTCTGGTGCCGATGTCGGTCGCCAAGCCCAAACGCGCTTGGGTCTTCGCGCTGATCTGCACCATTGGATCG
GTGCTCGGCGCGCTTCTTGGCTATGCGATCGGCGCCTTTCTCTATGAGACCGTCGGCAAATGGCTCATCAATCTCTATGG
CTATGGGGCGCGGGTCGACGAATTGCGCGCGCTTTACGCGCAATGGGGCTGGGCCGTCATTCTCATCAAGGGCCTCACGC
CCATTCCCTTCAAGATCGTCACCATTACCAGCGGTCTTTTGGCCTATAATATTCCGGTCTTCGTCGCCTTGTGCCTGCTC
ACGCGCGGAGCACGCTTTTTCATTCTGGCCCTGCTTCTGAATTTCTATGGTGAACCGATCAAGCGGCTGCTCGATCAATA
TTTTGGCCTCTTCTTGATTTTGCTCCTCGTAACCGTGGTCGGCGGTTTCTGGATCGCCACGCGCGTCCTGTGA

Upstream 100 bases:

>100_bases
TGGCCTGGCACCGCTCCTGCGCGGCTTCGCCGCCCGTGCAAAAAAAATCGAGTCCAAGCCGTGGGGGCTGGACGTGTAGG
TTCGAGGATTTGAGTCCAGC

Downstream 100 bases:

>100_bases
TGAGCTTGGCCCTTTTGTCTCGTCCCAAAGTGCCTCTGCTGCTCGCCATTGTTCTGCTGGCGAGCGGCGCCATTATCGGC
GCGTGGATTTTTCAGGCCTT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS
VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL
TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL

Sequences:

>Translated_210_residues
MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS
VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL
TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL
>Mature_210_residues
MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVPMSVAKPKRAWVFALICTIGS
VLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYAQWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLL
TRGARFFILALLLNFYGEPIKRLLDQYFGLFLILLLVTVVGGFWIATRVL

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23173; Mature: 23173

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC
MSVAKPKRAWVFALICTIGSVLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLLTRGARFFILALLLNFYGEPI
HHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH
KRLLDQYFGLFLILLLVTVVGGFWIATRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNAPSTASISPSEKRSVFQRLYDWTLSLAESRHAPLALGLVAFAESSFFPIPPDALLVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC
MSVAKPKRAWVFALICTIGSVLGALLGYAIGAFLYETVGKWLINLYGYGARVDELRALYA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QWGWAVILIKGLTPIPFKIVTITSGLLAYNIPVFVALCLLTRGARFFILALLLNFYGEPI
HHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH
KRLLDQYFGLFLILLLVTVVGGFWIATRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]