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The map label for this gene is rcsB [H]

Identifier: 17548105

GI number: 17548105

Start: 3653514

End: 3654161

Strand: Direct

Name: rcsB [H]

Synonym: RSc3388

Alternate gene names: 17548105

Gene position: 3653514-3654161 (Clockwise)

Preceding gene: 17548104

Following gene: 17548107

Centisome position: 98.31

GC content: 67.59

Gene sequence:

>648_bases
ATGTCACCGTTCCTGTCCATCGTGGCTGCGGACGACCATCCCGTCATCCTGATGGGACTGGCCACCGCCATCCAGCAATT
TCCCCGGCAGAAGATCATCGCGCAGGCGCACGACGGCCATGCGCTGCTGGCACTGCTCGAGTCCACCGACTGCGATGTCG
TCGTCACCGATTACCACATGAACGGCGACGCGGCGTCCGACGGCATGCAGTTGCTGACGCGGTTGCGCGCGCGGCATCCC
CAGCGCGCGGTGGTGGTCTGCACCATGGTTTGCAACCCGGCGCTGCTGCGCTGCATGCAGCAGCTGGGCGTGCGCCGCAT
CGTCAGCAAGCGCGACGATCTGGCGCATGTCGGCCACGCCGTCGCGGCAAGCGCGTGCGGGCTGCCCTACTACAGCCCCA
CCATCGTCCTGGAAGGCGGCTTCGGCATTGGCGCACGCGAGGCCTTCCAGGGCCTGAGCGCACGCGAGCGCGAAGTGGTG
AGCCTCTACGTGAGCGGCATGGCGGTGTCGGAGATCGCCAGCCGGCTCGGTTCCAGCATCAAGACCGTCAGCACGCAGAA
GACCATGGCGCTGCGCAAGCTCGGCCTGGCGCGCGAGACCGATCTGTTCCAGTACGTCCGCACCGCCGGGCTGCCGGCGC
TGCATTGA

Upstream 100 bases:

>100_bases
CGGACGATTCCGATGTCATGGGACGCCAGGCGCAGGTAAGGTCATTGCGGTACGTTCCCGGCCGGCATCTGCCGCCCTGC
TTCCAACCGACGAGCCGCCC

Downstream 100 bases:

>100_bases
GCGGCCGGCGCATCGGCGTCAGCCTGCCTTGGGGGGCGCAGGCGGCGCGAGCGGCTCCGGCCGGCGCATGCCCCGCCGGA
CACCGACGATCGCGGCCGAG

Product: two-component response regulator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSPFLSIVAADDHPVILMGLATAIQQFPRQKIIAQAHDGHALLALLESTDCDVVVTDYHMNGDAASDGMQLLTRLRARHP
QRAVVVCTMVCNPALLRCMQQLGVRRIVSKRDDLAHVGHAVAASACGLPYYSPTIVLEGGFGIGAREAFQGLSAREREVV
SLYVSGMAVSEIASRLGSSIKTVSTQKTMALRKLGLARETDLFQYVRTAGLPALH

Sequences:

>Translated_215_residues
MSPFLSIVAADDHPVILMGLATAIQQFPRQKIIAQAHDGHALLALLESTDCDVVVTDYHMNGDAASDGMQLLTRLRARHP
QRAVVVCTMVCNPALLRCMQQLGVRRIVSKRDDLAHVGHAVAASACGLPYYSPTIVLEGGFGIGAREAFQGLSAREREVV
SLYVSGMAVSEIASRLGSSIKTVSTQKTMALRKLGLARETDLFQYVRTAGLPALH
>Mature_214_residues
SPFLSIVAADDHPVILMGLATAIQQFPRQKIIAQAHDGHALLALLESTDCDVVVTDYHMNGDAASDGMQLLTRLRARHPQ
RAVVVCTMVCNPALLRCMQQLGVRRIVSKRDDLAHVGHAVAASACGLPYYSPTIVLEGGFGIGAREAFQGLSAREREVVS
LYVSGMAVSEIASRLGSSIKTVSTQKTMALRKLGLARETDLFQYVRTAGLPALH

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=213, Percent_Identity=32.3943661971831, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786747, Length=211, Percent_Identity=27.0142180094787, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23150; Mature: 23019

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFLSIVAADDHPVILMGLATAIQQFPRQKIIAQAHDGHALLALLESTDCDVVVTDYHM
CCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEC
NGDAASDGMQLLTRLRARHPQRAVVVCTMVCNPALLRCMQQLGVRRIVSKRDDLAHVGHA
CCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAASACGLPYYSPTIVLEGGFGIGAREAFQGLSAREREVVSLYVSGMAVSEIASRLGSSI
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
KTVSTQKTMALRKLGLARETDLFQYVRTAGLPALH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPFLSIVAADDHPVILMGLATAIQQFPRQKIIAQAHDGHALLALLESTDCDVVVTDYHM
CCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEC
NGDAASDGMQLLTRLRARHPQRAVVVCTMVCNPALLRCMQQLGVRRIVSKRDDLAHVGHA
CCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAASACGLPYYSPTIVLEGGFGIGAREAFQGLSAREREVVSLYVSGMAVSEIASRLGSSI
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
KTVSTQKTMALRKLGLARETDLFQYVRTAGLPALH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]