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The map label for this gene is 17548059

Identifier: 17548059

GI number: 17548059

Start: 3602377

End: 3603585

Strand: Reverse

Name: 17548059

Synonym: RSc3342

Alternate gene names: NA

Gene position: 3603585-3602377 (Counterclockwise)

Preceding gene: 17548060

Following gene: 17548058

Centisome position: 96.96

GC content: 64.52

Gene sequence:

>1209_bases
ATGACACTCAAGAAGCTGGCTGGTGCACTGATGGCGGCAGGACTGGGCCTTGCGGCATCCGGCGCGCATGCCCAGGTCTC
GGGCGACAAGGTGAAGATCGGCTACATCACCGATCTCTCCGGCCTGTATGCCGACATCGACGGGCAGGGCGGCGTCGAGG
CGGTCAAGATGGCGATCGAGGATGAGGGTGGCAAGGTGCTCGGCAAGCCGATCGAACTGGTCACGGCCGACCACCAGAAC
AAGGCCGACATCGCCGCCTCCAAGGCCCGCGAGTGGATGGACCAGCAAGGCCTGGACATGCTGGTGGGCGGCACCAACTC
GGCCACCTCGCTGGCGATGAGCAAGGTGGCGGCGGAGAAGAAGCGCGTCTTCATCGGCATCGGCGCCGGCACGGCCCGCC
TGACCAACGAGGAGTGCACGCCGTACACCATCCACTACGCGTACGACACGGTGGCGCTGGCCAAGGGCACCGGCAGCGCG
GTGGTCAAGCAGGGCGGCAAGTCGTGGTTCTTCCTGACCGCCGACTACGCCTTCGGCCATTCGCTGGAGAACGATACCGC
CGCTGTGGTCAAGGCCAACGGCGGCACGGTGGTGGGCTCGGTCAAGCATCCGCTGTCGGCCTCGGACTTCTCGTCGTACC
TGCTGCAGGCGCAGGCGTCCAAGGCGCAGATCCTGGGGCTGGCCAACGCGGGTGGCGACACCATCAACTCGATCAAGGCG
GCCAAGGAGTTCGGCATCACCAAGACGATGAAGATCGCCGGCCTGCTGATGTTCATCAACGACGTGCACAGCCTCGGCCT
GCAGACCGCCGAGGGCCTGCTGATGACCGACAGCTGGTACTGGGACATGAACGACGCCACCCGCAAGTTCGCCACCCGGT
ACTTCTCCAAGATGAAGAAGATGCCGAGCAGCCTGCAGGCCGCCGACTACTCGGCCGTGTCGAACTACATCAAGGCGGTG
GCCGCGGCCGGCACGGATGACCCGGACAAGGTGATCGCGCAGTTGAAGAAGACGCAGCTCAACGACTTCTTCTCCAAGGG
CACGATCCGCGCCGACGGCCGCTATGTCCACGACATGTACCTGATGCAGGTGAAGACCCCGGCCGAGTCGAAGAAGCCGT
GGGACTACATGAAGATCGTGGCGACCATTCCGGGCGACCAGGCATTCACCACGCCGGCCGAGTCGAAGTGCCCGCTGCTC
AAGAAGTAA

Upstream 100 bases:

>100_bases
AGATGCCGATACTGCACGAGCTGCTCGGCGTTTGATCGCTTTGCTTGACCTTTGCGCGGGGCGTGATCCGTCCGGCGCGC
ACGACACAGGAGACAAGACG

Downstream 100 bases:

>100_bases
GGCGGCAAGCCATCCGGTGTCGTCCGGCGCGTGCCGGGCGGCGCCGGCAACGGTCTCTTTTTCCCGATACGTGATGGAAA
TCTTCGGCGTTCCGCTACCG

Product: substrate-binding periplasmic (PBP) ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTLKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGKVLGKPIELVTADHQN
KADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSA
VVKQGGKSWFFLTADYAFGHSLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKA
AKEFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSSLQAADYSAVSNYIKAV
AAAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMYLMQVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLL
KK

Sequences:

>Translated_402_residues
MTLKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGKVLGKPIELVTADHQN
KADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSA
VVKQGGKSWFFLTADYAFGHSLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKA
AKEFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSSLQAADYSAVSNYIKAV
AAAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMYLMQVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLL
KK
>Mature_401_residues
TLKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGKVLGKPIELVTADHQNK
ADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAV
VKQGGKSWFFLTADYAFGHSLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKAA
KEFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSSLQAADYSAVSNYIKAVA
AAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMYLMQVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLK
K

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42739; Mature: 42608

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIE
CCHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEECCCCCEEECCCCCCHHHEEEEEE
DEGGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEK
CCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCC
KRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGH
CEEEEEECCCCEEECCCCCCCEEEEEEEEEEEEECCCCCHHHHCCCCEEEEEEECHHHCC
SLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKA
CCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
AKEFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKK
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEECCEEECCCHHHHHHHHHHHHHHHH
MPSSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEE
LMQVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLKK
EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIE
CHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEECCCCCEEECCCCCCHHHEEEEEE
DEGGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEK
CCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCC
KRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGH
CEEEEEECCCCEEECCCCCCCEEEEEEEEEEEEECCCCCHHHHCCCCEEEEEEECHHHCC
SLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKA
CCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
AKEFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKK
HHHHCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEECCEEECCCHHHHHHHHHHHHHHHH
MPSSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEE
LMQVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLKK
EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA