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The map label for this gene is 17547969

Identifier: 17547969

GI number: 17547969

Start: 3506740

End: 3507870

Strand: Reverse

Name: 17547969

Synonym: RSc3252

Alternate gene names: NA

Gene position: 3507870-3506740 (Counterclockwise)

Preceding gene: 17547970

Following gene: 17547968

Centisome position: 94.39

GC content: 54.02

Gene sequence:

>1131_bases
TTGACTCTCTCTCGCGAAGTATTGGACTGGGCCGCTGCAAAAGCGGGCGAGACTCTGCTTTCTTTCGCGGAAGAGGTGGC
GAAGCGCGAGAAAGATCGCGCGCTTATCGCCAACGGTCGTTTGACTATCCCGCAGGCAGAGAAGCTGGCGAAGAGGGCTC
GTATTCCGTTTGGCCATCTCTTTCTATCCAAGCCCCCGGCGATCGAGCGTCCACGAATTCCGGACCTACGGCAGCTGCAG
AGTGCGGCTCCATTGAGCGACGATTTCTATGAAACTCTCGAAGACGTGCTTGCCAAGCAGCAATGGTTTGCCGAATACTT
AGTTGAAGCCGGTGCGGCTGATTTGCCCTTCGTTGGCAGGTTTGACGCCGACATCAAGAAGAGCGCCAACGATATCGCTG
ACGATATTCGGCGAGAACTTGGCATTAGTGACGATGACCGGCGCAAGAGCCCGGATGCTTCTAGCTACTTCTCTACGCTG
AGCGCCAAAGCTGAAGCACGTGGCGTGCTGGTTTTCAAGACCAGCTATGTCAAAGCGAATACCCGACGTCCAATCTCCGA
GAAAGAGTTCCGCGGTTTCGCCGTTGCGCACAAGCTCGTGCCTTTGGTATTTGTCAACGGCCGTGATGCAGAAGTTGCTG
CCGTCTTTACTCTCATGCACGAACTAGCCCATATCTGGCTCGGTGTCACGGGGGTTTCCGACGTGACGCCACTTCAGTTC
GACAATGCTACGGAGCGCCTATGTAATCGTGTGGCCGCGAATATACTCGTTCCAATGGACACATTCATGAGGAGATGGGG
TGGCCCACAGGATGTGGACAATTTGGCAAAATATTTTCGAGTCAGTAAGCTCGTAATTGCTCGCCGCGCTCTGGACAGAA
AACTGATCGACCAGGCTTTCTATGATGAGATCGCGGCTAACTCTCAACGTGTTAAGTCCACCGGTAAGCCTACCGCGCTC
GTAACCATTCCGATCCGCAACAGCAAGAGGTTCACCCGAACGATTGTCGCGAATGCAATGAGCGGGCAGACGCTGTTGCG
TGACGCAGCAAGTCTATTGAATGTCAGACCTGACACGGTTGTGGCGTTAGCAAGGGGGCGTATCGAAAATGGCCAACCGA
TACATTATTGA

Upstream 100 bases:

>100_bases
TTGGTTTGGGGATATCAGAGATTGCCCCATCGCATTTCGTGAGATGAGGTATGGGTAAGCCGTTTGGCAATGGTGACACA
AGGCTACAGACGTGGAAGCA

Downstream 100 bases:

>100_bases
TTCCAACGTCTTCATTCAGGGCAAGAACTTTCATTACCATTTCTCGTTCTGCGAAGGATTTTGGGATTGGGTTCATGAAG
GCTTCGAAAAAGGAATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTLSREVLDWAAAKAGETLLSFAEEVAKREKDRALIANGRLTIPQAEKLAKRARIPFGHLFLSKPPAIERPRIPDLRQLQ
SAAPLSDDFYETLEDVLAKQQWFAEYLVEAGAADLPFVGRFDADIKKSANDIADDIRRELGISDDDRRKSPDASSYFSTL
SAKAEARGVLVFKTSYVKANTRRPISEKEFRGFAVAHKLVPLVFVNGRDAEVAAVFTLMHELAHIWLGVTGVSDVTPLQF
DNATERLCNRVAANILVPMDTFMRRWGGPQDVDNLAKYFRVSKLVIARRALDRKLIDQAFYDEIAANSQRVKSTGKPTAL
VTIPIRNSKRFTRTIVANAMSGQTLLRDAASLLNVRPDTVVALARGRIENGQPIHY

Sequences:

>Translated_376_residues
MTLSREVLDWAAAKAGETLLSFAEEVAKREKDRALIANGRLTIPQAEKLAKRARIPFGHLFLSKPPAIERPRIPDLRQLQ
SAAPLSDDFYETLEDVLAKQQWFAEYLVEAGAADLPFVGRFDADIKKSANDIADDIRRELGISDDDRRKSPDASSYFSTL
SAKAEARGVLVFKTSYVKANTRRPISEKEFRGFAVAHKLVPLVFVNGRDAEVAAVFTLMHELAHIWLGVTGVSDVTPLQF
DNATERLCNRVAANILVPMDTFMRRWGGPQDVDNLAKYFRVSKLVIARRALDRKLIDQAFYDEIAANSQRVKSTGKPTAL
VTIPIRNSKRFTRTIVANAMSGQTLLRDAASLLNVRPDTVVALARGRIENGQPIHY
>Mature_375_residues
TLSREVLDWAAAKAGETLLSFAEEVAKREKDRALIANGRLTIPQAEKLAKRARIPFGHLFLSKPPAIERPRIPDLRQLQS
AAPLSDDFYETLEDVLAKQQWFAEYLVEAGAADLPFVGRFDADIKKSANDIADDIRRELGISDDDRRKSPDASSYFSTLS
AKAEARGVLVFKTSYVKANTRRPISEKEFRGFAVAHKLVPLVFVNGRDAEVAAVFTLMHELAHIWLGVTGVSDVTPLQFD
NATERLCNRVAANILVPMDTFMRRWGGPQDVDNLAKYFRVSKLVIARRALDRKLIDQAFYDEIAANSQRVKSTGKPTALV
TIPIRNSKRFTRTIVANAMSGQTLLRDAASLLNVRPDTVVALARGRIENGQPIHY

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41916; Mature: 41785

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSREVLDWAAAKAGETLLSFAEEVAKREKDRALIANGRLTIPQAEKLAKRARIPFGHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCHHHH
FLSKPPAIERPRIPDLRQLQSAAPLSDDFYETLEDVLAKQQWFAEYLVEAGAADLPFVGR
EECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FDADIKKSANDIADDIRRELGISDDDRRKSPDASSYFSTLSAKAEARGVLVFKTSYVKAN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECEEECC
TRRPISEKEFRGFAVAHKLVPLVFVNGRDAEVAAVFTLMHELAHIWLGVTGVSDVTPLQF
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DNATERLCNRVAANILVPMDTFMRRWGGPQDVDNLAKYFRVSKLVIARRALDRKLIDQAF
CCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDEIAANSQRVKSTGKPTALVTIPIRNSKRFTRTIVANAMSGQTLLRDAASLLNVRPDTV
HHHHHCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
VALARGRIENGQPIHY
HHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLSREVLDWAAAKAGETLLSFAEEVAKREKDRALIANGRLTIPQAEKLAKRARIPFGHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCHHHH
FLSKPPAIERPRIPDLRQLQSAAPLSDDFYETLEDVLAKQQWFAEYLVEAGAADLPFVGR
EECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FDADIKKSANDIADDIRRELGISDDDRRKSPDASSYFSTLSAKAEARGVLVFKTSYVKAN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECEEECC
TRRPISEKEFRGFAVAHKLVPLVFVNGRDAEVAAVFTLMHELAHIWLGVTGVSDVTPLQF
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DNATERLCNRVAANILVPMDTFMRRWGGPQDVDNLAKYFRVSKLVIARRALDRKLIDQAF
CCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDEIAANSQRVKSTGKPTALVTIPIRNSKRFTRTIVANAMSGQTLLRDAASLLNVRPDTV
HHHHHCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
VALARGRIENGQPIHY
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA