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The map label for this gene is 17547968

Identifier: 17547968

GI number: 17547968

Start: 3506238

End: 3506762

Strand: Reverse

Name: 17547968

Synonym: RSc3251

Alternate gene names: NA

Gene position: 3506762-3506238 (Counterclockwise)

Preceding gene: 17547969

Following gene: 17547962

Centisome position: 94.36

GC content: 50.1

Gene sequence:

>525_bases
ATGGCCAACCGATACATTATTGATTCCAACGTCTTCATTCAGGGCAAGAACTTTCATTACCATTTCTCGTTCTGCGAAGG
ATTTTGGGATTGGGTTCATGAAGGCTTCGAAAAAGGAATGGTTTACAGCATTGGAAAAGTTCGTGCGGAGTTGCTTGCTG
GAAAGAAGGGCGATGAAGCGCGCAGTTGGGCCGAAGGCATGCCCGACGGCTTTTTTCTGGAAGACGTGGGAGATCTTGAT
GTGATGCGTGAATATGGTCATGTCATGAATTGGGCTGCAGCTGATACGCACTACCAGAAGGCCGCGCTACTAAGATTCGC
TGAAGCAACACGGGCCGATGCATTCTTGTTGGCCTATGCCCGTGCTCACGGGCACATCGTGGTTACGCAAGAGTTGTCGC
AGCCCGAAAAGCGAAAGGAGGTACCGATTCCGGACGCGGCAATCAAGATCGGAAAAATTAAGACTGTCACTATCTACGAT
CTACTCAAGATGCACGCCCGCCCGACCTTTGTCTTCAAGACTTGA

Upstream 100 bases:

>100_bases
GCGAATGCAATGAGCGGGCAGACGCTGTTGCGTGACGCAGCAAGTCTATTGAATGTCAGACCTGACACGGTTGTGGCGTT
AGCAAGGGGGCGTATCGAAA

Downstream 100 bases:

>100_bases
CGGCTAAGTTTCCTCCCTCTTTTTGAAAATTCCCTCATGTGACCGTACCCATGGAGGCTTATCCGGTGTGCGTACGACTA
CAGGTGAAAATGCCCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: PIN Domain-Containing Protein; PIN Domain Protein

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MANRYIIDSNVFIQGKNFHYHFSFCEGFWDWVHEGFEKGMVYSIGKVRAELLAGKKGDEARSWAEGMPDGFFLEDVGDLD
VMREYGHVMNWAAADTHYQKAALLRFAEATRADAFLLAYARAHGHIVVTQELSQPEKRKEVPIPDAAIKIGKIKTVTIYD
LLKMHARPTFVFKT

Sequences:

>Translated_174_residues
MANRYIIDSNVFIQGKNFHYHFSFCEGFWDWVHEGFEKGMVYSIGKVRAELLAGKKGDEARSWAEGMPDGFFLEDVGDLD
VMREYGHVMNWAAADTHYQKAALLRFAEATRADAFLLAYARAHGHIVVTQELSQPEKRKEVPIPDAAIKIGKIKTVTIYD
LLKMHARPTFVFKT
>Mature_173_residues
ANRYIIDSNVFIQGKNFHYHFSFCEGFWDWVHEGFEKGMVYSIGKVRAELLAGKKGDEARSWAEGMPDGFFLEDVGDLDV
MREYGHVMNWAAADTHYQKAALLRFAEATRADAFLLAYARAHGHIVVTQELSQPEKRKEVPIPDAAIKIGKIKTVTIYDL
LKMHARPTFVFKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19873; Mature: 19742

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRYIIDSNVFIQGKNFHYHFSFCEGFWDWVHEGFEKGMVYSIGKVRAELLAGKKGDEA
CCCCEEECCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCHH
RSWAEGMPDGFFLEDVGDLDVMREYGHVMNWAAADTHYQKAALLRFAEATRADAFLLAYA
HHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEEEE
RAHGHIVVTQELSQPEKRKEVPIPDAAIKIGKIKTVTIYDLLKMHARPTFVFKT
CCCCCEEEECCCCCCHHHCCCCCCHHHEEECCEEEEHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
ANRYIIDSNVFIQGKNFHYHFSFCEGFWDWVHEGFEKGMVYSIGKVRAELLAGKKGDEA
CCCEEECCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCHH
RSWAEGMPDGFFLEDVGDLDVMREYGHVMNWAAADTHYQKAALLRFAEATRADAFLLAYA
HHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEEEE
RAHGHIVVTQELSQPEKRKEVPIPDAAIKIGKIKTVTIYDLLKMHARPTFVFKT
CCCCCEEEECCCCCCHHHCCCCCCHHHEEECCEEEEHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA