| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is adhA [H]
Identifier: 17547849
GI number: 17547849
Start: 3376654
End: 3377679
Strand: Direct
Name: adhA [H]
Synonym: RSc3130
Alternate gene names: 17547849
Gene position: 3376654-3377679 (Clockwise)
Preceding gene: 17547848
Following gene: 17547850
Centisome position: 90.86
GC content: 70.18
Gene sequence:
>1026_bases ATGGCCAGGTCGATGAAAGCCGCTGTCGTGCACGCGTTCGGCGAACCGCTGCGCATCGAGGACGTCCCGATCCCGACGCC GGGCCGCGGACAGATCCTCGTCAACATCCGGGCTTCCGGGGTCTGCCACACCGACCTGCACGCCGCCGACGGCGACTGGC CGGTCAAGCCGCGCCTGCCGTTCATCCCCGGGCACGAGGGCGTGGGCTTCGTGGCGGCGGTGGGCGAAGGCGTCACCGCC GTCAAGGAAGGCGACCGCGTGGGCGTGCCCTGGCTCTACACCGCCTGCGGCCACTGCGAACACTGCCTGGGCGGCTGGGA AACCCTGTGCCACGACCAGCAGAACACTGGCTACTCCGTCAACGGCGGCTACGCCGAATACGTGCTGGCCGACCCCAACT ATGTCGGCCACCTGCCGGCGCAGGTCGGCTTCGAGGAGATCGCACCCATCCTGTGCGCGGGCGTGACGGTCTACAAGGGC ATCCGCATGACCGACACCCGCCCCGGCCAGTGGATCGCCATCTCGGGCATCGGCGGGCTGGGGCATGTGGCGGTGCAGTA TGCCGTCGCCATGGGGCTGCACGTGGTGGCGGTGGATGTCGCCCCCGAGAAGCTGGCGCTGGCGCGCGAACTGGGCGCCC GGCTGAGCGTCGATGCCTCGCAGCAGGACCCGGCCGCTGTCATCCAGAAGGAGGTGGGCGGCGTGCACGGCGTGCTGGTG ACGGCGGTCTCGCGCAGCGCCTTCGCCCAGGCCCTGGGCATGGTGCGACGCGGCGGCACCGTCTCGCTCAACGGATTGCC GCCGGGCGACTTTCCGCTGCCGATCTTCTCGACCGTGCTCAACGGCATCACGGTGCGCGGCTCCATCGTCGGCACGCGGC GCGATCTGCAGGAGTCGCTGCAGTTCGCCGCCGAGGGGCAGGTGCGCGCTCACATCCATCGCGACCGGCTCGACAACATC AACCAGGTCCTCGCCGACCTGAAAGCCGGCAAGGTGGACGGCCGCATCGTCCTCTCGCTGGACTGA
Upstream 100 bases:
>100_bases CGCAAGCACGGCATCGCCCGCCCCGGCGGTTGACGCACGTCAACCCGGCCCGGCCGCGCATCGACAAGACTGGGGGCTCC CCAACTCCCGGAGATCCGCC
Downstream 100 bases:
>100_bases GCAGCACGCCGTCACGGGGTGCGGGTAAGCTGTGCCGCATCACCGGCTTCCCTCACCCACCGTCATGCGCATCCTCTTCT TCAGCAGCCACCGTTACGAC
Product: propanol-preferring alcohol dehydrogenase oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MARSMKAAVVHAFGEPLRIEDVPIPTPGRGQILVNIRASGVCHTDLHAADGDWPVKPRLPFIPGHEGVGFVAAVGEGVTA VKEGDRVGVPWLYTACGHCEHCLGGWETLCHDQQNTGYSVNGGYAEYVLADPNYVGHLPAQVGFEEIAPILCAGVTVYKG IRMTDTRPGQWIAISGIGGLGHVAVQYAVAMGLHVVAVDVAPEKLALARELGARLSVDASQQDPAAVIQKEVGGVHGVLV TAVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLQFAAEGQVRAHIHRDRLDNI NQVLADLKAGKVDGRIVLSLD
Sequences:
>Translated_341_residues MARSMKAAVVHAFGEPLRIEDVPIPTPGRGQILVNIRASGVCHTDLHAADGDWPVKPRLPFIPGHEGVGFVAAVGEGVTA VKEGDRVGVPWLYTACGHCEHCLGGWETLCHDQQNTGYSVNGGYAEYVLADPNYVGHLPAQVGFEEIAPILCAGVTVYKG IRMTDTRPGQWIAISGIGGLGHVAVQYAVAMGLHVVAVDVAPEKLALARELGARLSVDASQQDPAAVIQKEVGGVHGVLV TAVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLQFAAEGQVRAHIHRDRLDNI NQVLADLKAGKVDGRIVLSLD >Mature_340_residues ARSMKAAVVHAFGEPLRIEDVPIPTPGRGQILVNIRASGVCHTDLHAADGDWPVKPRLPFIPGHEGVGFVAAVGEGVTAV KEGDRVGVPWLYTACGHCEHCLGGWETLCHDQQNTGYSVNGGYAEYVLADPNYVGHLPAQVGFEEIAPILCAGVTVYKGI RMTDTRPGQWIAISGIGGLGHVAVQYAVAMGLHVVAVDVAPEKLALARELGARLSVDASQQDPAAVIQKEVGGVHGVLVT AVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLQFAAEGQVRAHIHRDRLDNIN QVLADLKAGKVDGRIVLSLD
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI34577061, Length=369, Percent_Identity=29.810298102981, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4501933, Length=369, Percent_Identity=28.9972899728997, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4501929, Length=360, Percent_Identity=28.8888888888889, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI156523966, Length=368, Percent_Identity=26.6304347826087, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4501939, Length=361, Percent_Identity=26.5927977839335, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI71565154, Length=248, Percent_Identity=29.8387096774194, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI71565152, Length=364, Percent_Identity=25.5494505494505, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI71743840, Length=252, Percent_Identity=26.5873015873016, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI262073058, Length=252, Percent_Identity=26.5873015873016, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI194239674, Length=270, Percent_Identity=27.4074074074074, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI13236495, Length=270, Percent_Identity=27.4074074074074, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI194239676, Length=199, Percent_Identity=30.6532663316583, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI87081918, Length=337, Percent_Identity=44.8071216617211, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1786518, Length=346, Percent_Identity=32.6589595375723, Blast_Score=150, Evalue=9e-38, Organism=Escherichia coli, GI87082401, Length=311, Percent_Identity=30.5466237942122, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1790045, Length=348, Percent_Identity=27.8735632183908, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1788073, Length=266, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082125, Length=204, Percent_Identity=34.8039215686275, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786552, Length=242, Percent_Identity=33.8842975206612, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI226510992, Length=296, Percent_Identity=29.3918918918919, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1788407, Length=216, Percent_Identity=31.9444444444444, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788075, Length=282, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787863, Length=297, Percent_Identity=28.6195286195286, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790485, Length=293, Percent_Identity=26.962457337884, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790718, Length=287, Percent_Identity=24.7386759581882, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786825, Length=317, Percent_Identity=26.1829652996845, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17562584, Length=341, Percent_Identity=38.41642228739, Blast_Score=212, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17562582, Length=345, Percent_Identity=38.2608695652174, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71988145, Length=340, Percent_Identity=33.2352941176471, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17562876, Length=336, Percent_Identity=29.1666666666667, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17562878, Length=225, Percent_Identity=34.6666666666667, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI25146526, Length=380, Percent_Identity=24.2105263157895, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17507255, Length=266, Percent_Identity=28.1954887218045, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71997431, Length=382, Percent_Identity=24.0837696335079, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17565904, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319621, Length=343, Percent_Identity=38.7755102040816, Blast_Score=255, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6323961, Length=340, Percent_Identity=39.4117647058824, Blast_Score=254, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6323729, Length=340, Percent_Identity=39.1176470588235, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6324486, Length=340, Percent_Identity=37.9411764705882, Blast_Score=245, Evalue=7e-66, Organism=Saccharomyces cerevisiae, GI6319949, Length=326, Percent_Identity=27.3006134969325, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323980, Length=286, Percent_Identity=26.2237762237762, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319955, Length=339, Percent_Identity=27.7286135693215, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322619, Length=339, Percent_Identity=27.7286135693215, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320033, Length=381, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323099, Length=308, Percent_Identity=24.3506493506494, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137530, Length=323, Percent_Identity=29.1021671826625, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI17737897, Length=323, Percent_Identity=29.7213622291022, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI17737895, Length=237, Percent_Identity=27.8481012658228, Blast_Score=88, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 35963; Mature: 35831
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSMKAAVVHAFGEPLRIEDVPIPTPGRGQILVNIRASGVCHTDLHAADGDWPVKPRLP CCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC FIPGHEGVGFVAAVGEGVTAVKEGDRVGVPWLYTACGHCEHCLGGWETLCHDQQNTGYSV CCCCCCCCEEEEECCCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEE NGGYAEYVLADPNYVGHLPAQVGFEEIAPILCAGVTVYKGIRMTDTRPGQWIAISGIGGL CCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCH GHVAVQYAVAMGLHVVAVDVAPEKLALARELGARLSVDASQQDPAAVIQKEVGGVHGVLV HHHHHHHHHHHCEEEEEEECCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHHHH TAVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESL HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHH QFAAEGQVRAHIHRDRLDNINQVLADLKAGKVDGRIVLSLD HHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure ARSMKAAVVHAFGEPLRIEDVPIPTPGRGQILVNIRASGVCHTDLHAADGDWPVKPRLP CCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC FIPGHEGVGFVAAVGEGVTAVKEGDRVGVPWLYTACGHCEHCLGGWETLCHDQQNTGYSV CCCCCCCCEEEEECCCCCEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCEEE NGGYAEYVLADPNYVGHLPAQVGFEEIAPILCAGVTVYKGIRMTDTRPGQWIAISGIGGL CCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCH GHVAVQYAVAMGLHVVAVDVAPEKLALARELGARLSVDASQQDPAAVIQKEVGGVHGVLV HHHHHHHHHHHCEEEEEEECCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHHHH TAVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESL HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHH QFAAEGQVRAHIHRDRLDNINQVLADLKAGKVDGRIVLSLD HHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9659380; 11481432 [H]