| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547643
Identifier: 17547643
GI number: 17547643
Start: 3155557
End: 3156084
Strand: Direct
Name: 17547643
Synonym: RSc2924
Alternate gene names: NA
Gene position: 3155557-3156084 (Clockwise)
Preceding gene: 17547641
Following gene: 17547649
Centisome position: 84.91
GC content: 57.58
Gene sequence:
>528_bases ATGCAAGTCTTCGAAGACCAAGTCGTCTTCCGCCCCGCCAGTCTGTTCGATATCCCATCGATTTATCGGCTGGCTCAGTT GGGTAGCGTTGCCGGAGTCTATGCGGACACGTACCTCGACGGCGTCGGCCACGTTTTGCTGCTCAAGCAATTATTTGTCG CGTATCTGTCGGTCTGGTTTTCCAAGGCATGCATCGGCAACGGCCTGTCACCGCTCTCGGTGCTGGAACGCAATGGTGAA TTTGCAGGCTTTGCGTGGGTGCAGCAAGCCATCGGCAGCGCCACGCTCCATGTGAACATCTCGATGTTCTCCATCGCACC GGAATATTTCGGTATGGGGTGCGGTCGAGCCTTGCTGGACAATATCGTTCAGCGCCTGCCCAAAGGCGCCGTTTTGCAAG CCGAGTGCACACGGTATGCAGACAGCATGAAGGCCCTGCTGCGTCGATCCGGGTTCGTGCGTCGGCGGCAAAGTGTGGTC AGACCGAACCTCCTCGGCCTCGACGTGTACGAGAAAACCGTCGAATGA
Upstream 100 bases:
>100_bases AGGCTTGCCGAGGCAACGTCGTGCGGGTTCGGCATGGTTGTTTGTTTTGTTTGTGTACCTGCGCCCAGCCCCGTCATGTG CCGGGGAAAGATGTCGAGAA
Downstream 100 bases:
>100_bases GTCTCCCTGTTTTTGCCCTCCAGTGGCCAGGGTTCATGCGACACAATCCTTCGTTGGCCGAGCGCCAACCCCGTCTTTCA GCCCCCGATCACCTTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQVFEDQVVFRPASLFDIPSIYRLAQLGSVAGVYADTYLDGVGHVLLLKQLFVAYLSVWFSKACIGNGLSPLSVLERNGE FAGFAWVQQAIGSATLHVNISMFSIAPEYFGMGCGRALLDNIVQRLPKGAVLQAECTRYADSMKALLRRSGFVRRRQSVV RPNLLGLDVYEKTVE
Sequences:
>Translated_175_residues MQVFEDQVVFRPASLFDIPSIYRLAQLGSVAGVYADTYLDGVGHVLLLKQLFVAYLSVWFSKACIGNGLSPLSVLERNGE FAGFAWVQQAIGSATLHVNISMFSIAPEYFGMGCGRALLDNIVQRLPKGAVLQAECTRYADSMKALLRRSGFVRRRQSVV RPNLLGLDVYEKTVE >Mature_175_residues MQVFEDQVVFRPASLFDIPSIYRLAQLGSVAGVYADTYLDGVGHVLLLKQLFVAYLSVWFSKACIGNGLSPLSVLERNGE FAGFAWVQQAIGSATLHVNISMFSIAPEYFGMGCGRALLDNIVQRLPKGAVLQAECTRYADSMKALLRRSGFVRRRQSVV RPNLLGLDVYEKTVE
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19339; Mature: 19339
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVFEDQVVFRPASLFDIPSIYRLAQLGSVAGVYADTYLDGVGHVLLLKQLFVAYLSVWF CCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKACIGNGLSPLSVLERNGEFAGFAWVQQAIGSATLHVNISMFSIAPEYFGMGCGRALLD HHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEHHHEECHHHHCCCCCHHHHH NIVQRLPKGAVLQAECTRYADSMKALLRRSGFVRRRQSVVRPNLLGLDVYEKTVE HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MQVFEDQVVFRPASLFDIPSIYRLAQLGSVAGVYADTYLDGVGHVLLLKQLFVAYLSVWF CCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKACIGNGLSPLSVLERNGEFAGFAWVQQAIGSATLHVNISMFSIAPEYFGMGCGRALLD HHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEHHHEECHHHHCCCCCHHHHH NIVQRLPKGAVLQAECTRYADSMKALLRRSGFVRRRQSVVRPNLLGLDVYEKTVE HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA