| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ggt2 [H]
Identifier: 17547640
GI number: 17547640
Start: 3149308
End: 3151179
Strand: Reverse
Name: ggt2 [H]
Synonym: RSc2921
Alternate gene names: 17547640
Gene position: 3151179-3149308 (Counterclockwise)
Preceding gene: 17547642
Following gene: 17547636
Centisome position: 84.79
GC content: 73.18
Gene sequence:
>1872_bases ATGGCAACCCAGGCTGTTTCCTTGGCGCGCGTGCGCGGCCCGCTGGCGCTGGCGGCGCTGACGCTGCTCGGCGCATGTTC CACGCGGACCGCCGTGCCGACGCCGGCCCCAGTGGCCGGCTCGCCGTCTGTCGCGCCCGAGTCGCCGCGCCCGCCGGAGG TGGCCTCGGGCTACCGCACCGGCATGACGACGGCCTACGCCGAGCAGCACATGGCCGCCGCCGCCAACCCGCTCGCGGCG GAAGCGGGCCGGCGCATCCTGCGGCAGGGCGGCTCGGCCATCGACGCGGCCATCGCCATGCAGGCCGTGCTGACGCTGGT CGAGCCGCAGGCCTCCGGTATCGGCGGTGGCGCCTTCCTCCTCTACTGGGACGGCAAGCGCGTGCAGGCCTATGACGGCT GGGAGACCGCCCCGGCCGGTGCCGACGAGAACCTGTTCCTGCGCCCCGACGGCACGTCGATGGGCTTGAGCGAGGCCCGG ATCGGCGGCCGCGCGGTCGGCGTGCCCGGCGTGCTGCGCGCGCTGGAGCTGGCCCACCGCCGGTACGGCAAGCTGCCCTG GACCAGACTGCTCCAGCCGGCCGTCGAGCTGGCGGAGCAGGGGTTCCCGGTTTCGCCGCGGCTCTATACGCAGATCGCGG CCGACCCGTTCATCGCCGGGTCGCCGGAGATGGCGGCGTATTTCCTCACGCCGCAAGGCAAGCCCAAGCCGGTCGGGACG ATCGTGAGGAACCCGCAGCTGGCGCAGACGCTGCGCGAGATCGCCAGGCACGGCCCCGGCGCGTTCTATGCCGGGCCGAT CGCGGCCGACATCGTCAAACGCGTGAGCGGCGGCGCCAATCCGGGCACGCTGTCGCTGGCTGACCTGCGGGGCTATCGCG CCAAAGAGCGCGATCCCATCTGCGCCGACTACCAGCGCTGGAAGGTCTGCGGCATGCCCCCGCCGTCGTCGGGCGGCATC GCCATCGCGCAGATGCTGGGCACGCTGCAGGCCCTGGCGGCGCGCGATCCGAAGTACGCGCTGGCCGCGATGGCACCGCG CGAGACCACCCGCGCCGCCGGCCTCGAACCCAGCGTCGACGCCGTGCACGTGGTGTCCGAAGCCGGGCGCCAGGCCGATG CGGATCGCGGCCTTTACGTGGCCGACGCGGATTTCGTGCCGGTCAACGTCAAGGGCCTGACCGATCCGGGGTACCTGACG CTGCGCGCCGGGCTGATCGGCGACCGGAGCACGGGCCGGGCCGATCCCGGCACGCCGCCCGGGACCTCCATCGCGCTGGC GCCGGACCGCTCGCCGCCGCGCGTATCGACCTCGCAGATCGTGGCGGTGGACAACGCCGGCGGCGCGGTGTCCATGACGA CCGCCATCGACAGCGATTTCGGCGCGCACCTGATGGTGCGCGGCTTCGTGCTGAACAGCGGGCTCACCGATTTCTCGTTC GTGCCGAACGACGGCGGCAAGCCGGTCGCCAATCGCGTGCAGGCCGGCAAGCGGCCGCGCTCGTCGATGGCGCCGACGCT GGTGTTCGAACGCGACAGCGGCCGGCTGGTGGCGGCGCTCGGTTCGCCCGGCGGCTCGCAGAGTATCGAATACGTGTCGA AGACGCTGATCGGTCTGCTGGACTGGGACATGGACGTGCAGAGTGCGATCAACCTGCCCAACTTCGGCAGCCGCAACGGC CCGACCGAGGTGGAGCGGGGTCTGGTGACGCAGCCGCTGGTACAGGGCCTGAAGGCGCGCGGCCACGACGTCGCGCAGAT CGAGATGACCAGCGGCACGCAGGCCATCGTGCGGCGCCGGCGCGACGACGGCAGGTGGGGCTGGGCCGGCGGCGCCGACC CGCGCCGCGAAGGGGTGGCGCTGGGCGACTGA
Upstream 100 bases:
>100_bases TGGGTCCGGCATGGTGTACCGGGCGGTGGGTTTGGGGCAGGGCCCGGCACGTCACCATCCGCTTCCTGCAATGAGGCTTT GGAATCACGAGGAGAACCGC
Downstream 100 bases:
>100_bases GCCGCGCGCCTGCATCGGGCCGGGCGGACGGGCCGTGCACTGCGCACGGCCCGTCTGCTTTTGCGGCAGCGACGCTACCA GGCGTATTTCGCGGTCGCGA
Product: gamma-glutamyltranspeptidase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MATQAVSLARVRGPLALAALTLLGACSTRTAVPTPAPVAGSPSVAPESPRPPEVASGYRTGMTTAYAEQHMAAAANPLAA EAGRRILRQGGSAIDAAIAMQAVLTLVEPQASGIGGGAFLLYWDGKRVQAYDGWETAPAGADENLFLRPDGTSMGLSEAR IGGRAVGVPGVLRALELAHRRYGKLPWTRLLQPAVELAEQGFPVSPRLYTQIAADPFIAGSPEMAAYFLTPQGKPKPVGT IVRNPQLAQTLREIARHGPGAFYAGPIAADIVKRVSGGANPGTLSLADLRGYRAKERDPICADYQRWKVCGMPPPSSGGI AIAQMLGTLQALAARDPKYALAAMAPRETTRAAGLEPSVDAVHVVSEAGRQADADRGLYVADADFVPVNVKGLTDPGYLT LRAGLIGDRSTGRADPGTPPGTSIALAPDRSPPRVSTSQIVAVDNAGGAVSMTTAIDSDFGAHLMVRGFVLNSGLTDFSF VPNDGGKPVANRVQAGKRPRSSMAPTLVFERDSGRLVAALGSPGGSQSIEYVSKTLIGLLDWDMDVQSAINLPNFGSRNG PTEVERGLVTQPLVQGLKARGHDVAQIEMTSGTQAIVRRRRDDGRWGWAGGADPRREGVALGD
Sequences:
>Translated_623_residues MATQAVSLARVRGPLALAALTLLGACSTRTAVPTPAPVAGSPSVAPESPRPPEVASGYRTGMTTAYAEQHMAAAANPLAA EAGRRILRQGGSAIDAAIAMQAVLTLVEPQASGIGGGAFLLYWDGKRVQAYDGWETAPAGADENLFLRPDGTSMGLSEAR IGGRAVGVPGVLRALELAHRRYGKLPWTRLLQPAVELAEQGFPVSPRLYTQIAADPFIAGSPEMAAYFLTPQGKPKPVGT IVRNPQLAQTLREIARHGPGAFYAGPIAADIVKRVSGGANPGTLSLADLRGYRAKERDPICADYQRWKVCGMPPPSSGGI AIAQMLGTLQALAARDPKYALAAMAPRETTRAAGLEPSVDAVHVVSEAGRQADADRGLYVADADFVPVNVKGLTDPGYLT LRAGLIGDRSTGRADPGTPPGTSIALAPDRSPPRVSTSQIVAVDNAGGAVSMTTAIDSDFGAHLMVRGFVLNSGLTDFSF VPNDGGKPVANRVQAGKRPRSSMAPTLVFERDSGRLVAALGSPGGSQSIEYVSKTLIGLLDWDMDVQSAINLPNFGSRNG PTEVERGLVTQPLVQGLKARGHDVAQIEMTSGTQAIVRRRRDDGRWGWAGGADPRREGVALGD >Mature_622_residues ATQAVSLARVRGPLALAALTLLGACSTRTAVPTPAPVAGSPSVAPESPRPPEVASGYRTGMTTAYAEQHMAAAANPLAAE AGRRILRQGGSAIDAAIAMQAVLTLVEPQASGIGGGAFLLYWDGKRVQAYDGWETAPAGADENLFLRPDGTSMGLSEARI GGRAVGVPGVLRALELAHRRYGKLPWTRLLQPAVELAEQGFPVSPRLYTQIAADPFIAGSPEMAAYFLTPQGKPKPVGTI VRNPQLAQTLREIARHGPGAFYAGPIAADIVKRVSGGANPGTLSLADLRGYRAKERDPICADYQRWKVCGMPPPSSGGIA IAQMLGTLQALAARDPKYALAAMAPRETTRAAGLEPSVDAVHVVSEAGRQADADRGLYVADADFVPVNVKGLTDPGYLTL RAGLIGDRSTGRADPGTPPGTSIALAPDRSPPRVSTSQIVAVDNAGGAVSMTTAIDSDFGAHLMVRGFVLNSGLTDFSFV PNDGGKPVANRVQAGKRPRSSMAPTLVFERDSGRLVAALGSPGGSQSIEYVSKTLIGLLDWDMDVQSAINLPNFGSRNGP TEVERGLVTQPLVQGLKARGHDVAQIEMTSGTQAIVRRRRDDGRWGWAGGADPRREGVALGD
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=555, Percent_Identity=31.5315315315315, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI73915090, Length=555, Percent_Identity=31.5315315315315, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI73915096, Length=555, Percent_Identity=31.5315315315315, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI73915094, Length=555, Percent_Identity=31.5315315315315, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI113429324, Length=567, Percent_Identity=30.6878306878307, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI113429326, Length=574, Percent_Identity=30.8362369337979, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI109148539, Length=526, Percent_Identity=27.7566539923954, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI153266885, Length=541, Percent_Identity=28.2809611829945, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI153266901, Length=542, Percent_Identity=27.6752767527675, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI153266907, Length=539, Percent_Identity=26.9016697588126, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI30581157, Length=192, Percent_Identity=34.375, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI30581155, Length=192, Percent_Identity=34.375, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI171543825, Length=176, Percent_Identity=30.1136363636364, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789856, Length=551, Percent_Identity=34.8457350272232, Blast_Score=246, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17542894, Length=566, Percent_Identity=31.8021201413428, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI212646519, Length=520, Percent_Identity=30.5769230769231, Blast_Score=185, Evalue=7e-47, Organism=Caenorhabditis elegans, GI72000294, Length=520, Percent_Identity=30.5769230769231, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI193208247, Length=536, Percent_Identity=28.7313432835821, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI193208245, Length=536, Percent_Identity=28.7313432835821, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17506189, Length=533, Percent_Identity=29.4559099437148, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17564448, Length=457, Percent_Identity=24.945295404814, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI72001497, Length=276, Percent_Identity=26.0869565217391, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI72001495, Length=276, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323330, Length=536, Percent_Identity=23.8805970149254, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI45551474, Length=571, Percent_Identity=29.2469352014011, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24642670, Length=571, Percent_Identity=29.2469352014011, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24642666, Length=571, Percent_Identity=29.2469352014011, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI161077878, Length=572, Percent_Identity=29.5454545454545, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI161077880, Length=572, Percent_Identity=29.5454545454545, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI18859893, Length=533, Percent_Identity=28.1425891181989, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI161077496, Length=535, Percent_Identity=27.6635514018692, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI18859741, Length=529, Percent_Identity=26.4650283553875, Blast_Score=132, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 65011; Mature: 64879
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQAVSLARVRGPLALAALTLLGACSTRTAVPTPAPVAGSPSVAPESPRPPEVASGYRT CCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHC GMTTAYAEQHMAAAANPLAAEAGRRILRQGGSAIDAAIAMQAVLTLVEPQASGIGGGAFL CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE LYWDGKRVQAYDGWETAPAGADENLFLRPDGTSMGLSEARIGGRAVGVPGVLRALELAHR EEECCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHH RYGKLPWTRLLQPAVELAEQGFPVSPRLYTQIAADPFIAGSPEMAAYFLTPQGKPKPVGT HHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHH IVRNPQLAQTLREIARHGPGAFYAGPIAADIVKRVSGGANPGTLSLADLRGYRAKERDPI HHCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCC CADYQRWKVCGMPPPSSGGIAIAQMLGTLQALAARDPKYALAAMAPRETTRAAGLEPSVD CCCCHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCH AVHVVSEAGRQADADRGLYVADADFVPVNVKGLTDPGYLTLRAGLIGDRSTGRADPGTPP HHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC GTSIALAPDRSPPRVSTSQIVAVDNAGGAVSMTTAIDSDFGAHLMVRGFVLNSGLTDFSF CCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEE VPNDGGKPVANRVQAGKRPRSSMAPTLVFERDSGRLVAALGSPGGSQSIEYVSKTLIGLL CCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH DWDMDVQSAINLPNFGSRNGPTEVERGLVTQPLVQGLKARGHDVAQIEMTSGTQAIVRRR CCCCCHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH RDDGRWGWAGGADPRREGVALGD CCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure ATQAVSLARVRGPLALAALTLLGACSTRTAVPTPAPVAGSPSVAPESPRPPEVASGYRT CCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHC GMTTAYAEQHMAAAANPLAAEAGRRILRQGGSAIDAAIAMQAVLTLVEPQASGIGGGAFL CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE LYWDGKRVQAYDGWETAPAGADENLFLRPDGTSMGLSEARIGGRAVGVPGVLRALELAHR EEECCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHH RYGKLPWTRLLQPAVELAEQGFPVSPRLYTQIAADPFIAGSPEMAAYFLTPQGKPKPVGT HHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHH IVRNPQLAQTLREIARHGPGAFYAGPIAADIVKRVSGGANPGTLSLADLRGYRAKERDPI HHCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCC CADYQRWKVCGMPPPSSGGIAIAQMLGTLQALAARDPKYALAAMAPRETTRAAGLEPSVD CCCCHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCH AVHVVSEAGRQADADRGLYVADADFVPVNVKGLTDPGYLTLRAGLIGDRSTGRADPGTPP HHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCC GTSIALAPDRSPPRVSTSQIVAVDNAGGAVSMTTAIDSDFGAHLMVRGFVLNSGLTDFSF CCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEE VPNDGGKPVANRVQAGKRPRSSMAPTLVFERDSGRLVAALGSPGGSQSIEYVSKTLIGLL CCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH DWDMDVQSAINLPNFGSRNGPTEVERGLVTQPLVQGLKARGHDVAQIEMTSGTQAIVRRR CCCCCHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH RDDGRWGWAGGADPRREGVALGD CCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA