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The map label for this gene is cyoA1 [H]

Identifier: 17547636

GI number: 17547636

Start: 3143792

End: 3144781

Strand: Reverse

Name: cyoA1 [H]

Synonym: RSc2917

Alternate gene names: 17547636

Gene position: 3144781-3143792 (Counterclockwise)

Preceding gene: 17547640

Following gene: 17547635

Centisome position: 84.62

GC content: 62.93

Gene sequence:

>990_bases
ATGAAGAACCAATCCTTTCCACGTTTGAAGCGGCTTCTGGCCGCAAGCATTCCCCTGCTGCTGTCGGGATGCAACCTGAC
GGTCCTGGACCCGAAGGGGATGATCGGCGCCGAGGAAAAGACGCTGATCATTGTGGCGACCGCTCTGATGCTGCTGGTGG
TCGTCCCTGTGATCGTGTTGACGCTGGCGTTCGCGTGGAAGTACCGCGCGAGCAACACCAAGGCCCGCTACGAGCCGGAC
TGGTCGCATTCCACCGCGATCGAAGTGGTGGTGTGGCTGATCCCGTGCCTGATCATCATCGCGCTGGGCGTGATCACCTA
CCGCTCGACGCACGCGCTCGATCCGTACAAGCCGATCGAATCCGACGTCAAGCCGATCACCATCGAGGCCGTGTCGCTCG
ACTGGAAGTGGCTGTTCATCTACCCGGAACTGAAGATCGCGACCGTCAACCAGATCGCGTTCCCGGCCAACACGCCCGTC
AACTTCAAGATCACGTCCGACTCGGTGATGAACGCCTTCTTCATCCCGCAGCTCGGCAGCCAGGTGTACGCCATGGCCGG
CATGCAGACCAAGCTGCACCTGATCGCGAACGAAACCGGCCAGTTTGACGGCATCTCGTCCAACTACAGCGGCGCCGGCT
TCACCGGCATGAAGTTCGTGGCAACGGCCATGACCAACGAAGAATTCGACGCCTGGGTCAAGCAGGTGCGCGCGTCGTCG
CAGAGCCTGACCAAGGAAGGCTACGCCGAGCTGGCCAAGCCGAGCGAGAAGGTGCCCCCGGCAATGTACGCCTCGGTGGA
CCCGACGCTGTACCACAGCATCCTGCACAAATACATGGGCGACTCGGACAAGGTCCTGACGCTCGACGAGGCGCTCGAAG
GCGCCAACTGCACGACGGCCACGGCCGAGGCGGCAACGCGTCCGCTGCCGGTGCAGTCCGCCCTGCCGGCGCCGAAGGCT
GCAACGGCGGCCACGCCCAAGAATTCCTAG

Upstream 100 bases:

>100_bases
GTGCCAGATGCACGGTCTTTTTCATTTCCAGCGTTTTCTGCCTGTGGCCTTGATGGCCCCCGTGATGTCCGGAAGCATCG
CCGGCGCAACTGTGCAAGAC

Downstream 100 bases:

>100_bases
GAGTTGACGATGTTTGGCAAGTTGAGTCTGGAGGCCATTCCGCTGCACGAGCCCATCGTGGTCGTGACAGTGTCGGCCAT
TCTGCTGGGTGGCGCCGGCC

Product: transmembrane cytochrome O ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKNQSFPRLKRLLAASIPLLLSGCNLTVLDPKGMIGAEEKTLIIVATALMLLVVVPVIVLTLAFAWKYRASNTKARYEPD
WSHSTAIEVVVWLIPCLIIIALGVITYRSTHALDPYKPIESDVKPITIEAVSLDWKWLFIYPELKIATVNQIAFPANTPV
NFKITSDSVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGQFDGISSNYSGAGFTGMKFVATAMTNEEFDAWVKQVRASS
QSLTKEGYAELAKPSEKVPPAMYASVDPTLYHSILHKYMGDSDKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKA
ATAATPKNS

Sequences:

>Translated_329_residues
MKNQSFPRLKRLLAASIPLLLSGCNLTVLDPKGMIGAEEKTLIIVATALMLLVVVPVIVLTLAFAWKYRASNTKARYEPD
WSHSTAIEVVVWLIPCLIIIALGVITYRSTHALDPYKPIESDVKPITIEAVSLDWKWLFIYPELKIATVNQIAFPANTPV
NFKITSDSVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGQFDGISSNYSGAGFTGMKFVATAMTNEEFDAWVKQVRASS
QSLTKEGYAELAKPSEKVPPAMYASVDPTLYHSILHKYMGDSDKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKA
ATAATPKNS
>Mature_329_residues
MKNQSFPRLKRLLAASIPLLLSGCNLTVLDPKGMIGAEEKTLIIVATALMLLVVVPVIVLTLAFAWKYRASNTKARYEPD
WSHSTAIEVVVWLIPCLIIIALGVITYRSTHALDPYKPIESDVKPITIEAVSLDWKWLFIYPELKIATVNQIAFPANTPV
NFKITSDSVMNAFFIPQLGSQVYAMAGMQTKLHLIANETGQFDGISSNYSGAGFTGMKFVATAMTNEEFDAWVKQVRASS
QSLTKEGYAELAKPSEKVPPAMYASVDPTLYHSILHKYMGDSDKVLTLDEALEGANCTTATAEAATRPLPVQSALPAPKA
ATAATPKNS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=294, Percent_Identity=53.4013605442177, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 35782; Mature: 35782

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQSFPRLKRLLAASIPLLLSGCNLTVLDPKGMIGAEEKTLIIVATALMLLVVVPVIVL
CCCCCHHHHHHHHHHHCHHHEECCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
TLAFAWKYRASNTKARYEPDWSHSTAIEVVVWLIPCLIIIALGVITYRSTHALDPYKPIE
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SDVKPITIEAVSLDWKWLFIYPELKIATVNQIAFPANTPVNFKITSDSVMNAFFIPQLGS
CCCCEEEEEEEEECEEEEEEECCEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC
QVYAMAGMQTKLHLIANETGQFDGISSNYSGAGFTGMKFVATAMTNEEFDAWVKQVRASS
HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
QSLTKEGYAELAKPSEKVPPAMYASVDPTLYHSILHKYMGDSDKVLTLDEALEGANCTTA
HHHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCC
TAEAATRPLPVQSALPAPKAATAATPKNS
CHHHHCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNQSFPRLKRLLAASIPLLLSGCNLTVLDPKGMIGAEEKTLIIVATALMLLVVVPVIVL
CCCCCHHHHHHHHHHHCHHHEECCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
TLAFAWKYRASNTKARYEPDWSHSTAIEVVVWLIPCLIIIALGVITYRSTHALDPYKPIE
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SDVKPITIEAVSLDWKWLFIYPELKIATVNQIAFPANTPVNFKITSDSVMNAFFIPQLGS
CCCCEEEEEEEEECEEEEEEECCEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCC
QVYAMAGMQTKLHLIANETGQFDGISSNYSGAGFTGMKFVATAMTNEEFDAWVKQVRASS
HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
QSLTKEGYAELAKPSEKVPPAMYASVDPTLYHSILHKYMGDSDKVLTLDEALEGANCTTA
HHHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCC
TAEAATRPLPVQSALPAPKAATAATPKNS
CHHHHCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]