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The map label for this gene is cyoC1 [H]

Identifier: 17547634

GI number: 17547634

Start: 3141164

End: 3141799

Strand: Reverse

Name: cyoC1 [H]

Synonym: RSc2915

Alternate gene names: 17547634

Gene position: 3141799-3141164 (Counterclockwise)

Preceding gene: 17547635

Following gene: 17547633

Centisome position: 84.54

GC content: 64.15

Gene sequence:

>636_bases
ATGGCTACCAATGTTCTAGACGGCCACGCCGCGCACGCCGCGGACCACGGCCACGCGCATGACCATGCGCACCACCACGA
TGCCGCAGACACCAAGGTGTTCGGCTTCTGGGTGTACCTGATGAGCGACTTGATCATCTTCGCATCGCTGTTCGCCACGT
TCTGCGTGCTGCGCAGCGCGACGGCGGGCGGCCCGGATGGCAAGGAGCTGTTCGACCTGTCGTATGTGCTGATCGAGACG
GGCATCCTGCTCGTGTCGTCCATCACCTACGGCATGGTGATGGTCGGCCTGCAGGCCGGCCGCAAGGACCAGGTGATGCT
GTGGCTGGGCATCACCTTCCTGCTGGGCGCGGCGTTCGTCGGCATGGAAATCAACGAGTTCCACCACCTGATCGCCGAAG
GCGCGGGCCCGAGCCGCAGCGCATTCCTGTCGTCGTTCTTCACGCTGGTCGGCACGCACGGCCTGCACGTGGCGAGCGGC
CTGCTGTGGATCGCCGTCCTGATGTGGCAGATCAGCCGTAAGGGCCTGACGACCACCAACTCGACCCGCCTGGCGTGCCT
GAGCCTGTTCTGGCACTTCTTGGATGTGGTGTGGATCGGCGTGTTCACCGTCGTCTATCTGCTGGGAGCGATGTAA

Upstream 100 bases:

>100_bases
CCGCAGCAACAACGACGACATCGATTACTACGTGCCCGCTCAAGAGGTTCATGAGACCGAGTCGGCCTACTTCCAACGCA
TCGGTTCGCAGGCTTAAACC

Downstream 100 bases:

>100_bases
ATGGAACAGACCAACGTTTCCTCCAACGTCCACGCCGACGCGCATGGCCACGCCACCGGCGGTGCCGGCCATGCCACCGT
CAAGGGCTACCTGATCGGCT

Product: transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MATNVLDGHAAHAADHGHAHDHAHHHDAADTKVFGFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIET
GILLVSSITYGMVMVGLQAGRKDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASG
LLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM

Sequences:

>Translated_211_residues
MATNVLDGHAAHAADHGHAHDHAHHHDAADTKVFGFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIET
GILLVSSITYGMVMVGLQAGRKDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASG
LLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM
>Mature_210_residues
ATNVLDGHAAHAADHGHAHDHAHHHDAADTKVFGFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIETG
ILLVSSITYGMVMVGLQAGRKDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASGL
LWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=211, Percent_Identity=63.9810426540284, Blast_Score=273, Evalue=7e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22961; Mature: 22830

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNVLDGHAAHAADHGHAHDHAHHHDAADTKVFGFWVYLMSDLIIFASLFATFCVLRSA
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAGGPDGKELFDLSYVLIETGILLVSSITYGMVMVGLQAGRKDQVMLWLGITFLLGAAFV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASGLLWIAVLMWQISRKGLTTTN
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STRLACLSLFWHFLDVVWIGVFTVVYLLGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATNVLDGHAAHAADHGHAHDHAHHHDAADTKVFGFWVYLMSDLIIFASLFATFCVLRSA
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAGGPDGKELFDLSYVLIETGILLVSSITYGMVMVGLQAGRKDQVMLWLGITFLLGAAFV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASGLLWIAVLMWQISRKGLTTTN
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STRLACLSLFWHFLDVVWIGVFTVVYLLGAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]