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The map label for this gene is dppC1 [H]

Identifier: 17547587

GI number: 17547587

Start: 3090411

End: 3091325

Strand: Reverse

Name: dppC1 [H]

Synonym: RSc2868

Alternate gene names: 17547587

Gene position: 3091325-3090411 (Counterclockwise)

Preceding gene: 17547588

Following gene: 17547586

Centisome position: 83.18

GC content: 68.2

Gene sequence:

>915_bases
ATGACGACTTCCACCACCGCGACCGCCAGGCCGGCCGCAGAAGAAACGCCGCTGCGCCGCTTCGTGCGCCAGTTCTGCGC
CAGCCGCGCGGCGGTGATCGGCGTGATCGTGCTGGCGATCATCATTGTCGTGGCGTTGGCGGCGCCGTGGATTGCGCCGC
AGAACCCGTACGATCTGTCCAGGCTCGACGTGCTCGATTCGCGCCTCGCGCCCGGCGAGAAATCCGGCGATGGCATGATC
TTCCTGCTCGGCTCGGATGACCAGGGGCGCGACATCCTGTCCGCCATCCTCTATGGCCTGCGTATCAGCGTGGGCGTGGG
CGCGGTGAGCACGGTGATCGCGCTGGCGCTGGGCACGGTGCTGGGGCTGATCGCCGGCTTCGCGGGCGGGCGCATCGAAT
CGCTCATCATGCGGATCGCCGACCTGCAGCTGTCGTTTCCGCCGATCCTGCTGGCGCTGATCCTGCTGGCGCTGCTCAGG
CCGGGCCTGGCCAACATCGTGATCGCGCTGGTGGCGGTGCAATGGGCGTACTACGCGCGCACCACGCGCAGCGCGGCGCT
GGTGGAGCGCCGGCGCGAATACATCGAGGCGGCGCAGGTGCTGGGCCTGCCGCCGTCGCGCATCATGTTCCGCCATCTGC
TGCCGAACTGCCTGCCGCCGCTGATCGTGATCGCGGCGCTGCAGGTGGCTTCGGCGATCACGCTGGAGGCGACGCTGTCG
TTCCTGGGGCTGGGGGTGCCGATCACCGAGCCGTCGCTGGGGCTGCTGATCGCCAACGGCTTCCAGTACATGCTGTCGGG
CAAGTACTGGATCAGCTTCTTTCCCGGCCTGGCGCTGCTGCTGACCATCGTGTCGATGAACCTGGTCTCGGACCAGCTCC
GCGACGTGCTCAACCCCCGCCTGCAGACGCTATGA

Upstream 100 bases:

>100_bases
CTGGTGATCGTGACGCTGTTCATCCTGATCAATCTGGTGGTCGACCTGATCTACGGCGTGCTCGATCCGCGCGTGCGCCT
GTCCGAAAGCCGGAGCTGAC

Downstream 100 bases:

>100_bases
CGATGTCCGCCACCGCCAGGCCGACGCTCGCCGTCGAGGGCCTGAAGACCGAGTTCACCACGCGTGGCGGCGTCGCGCGG
GCGGTCGACGACGTGTCGTT

Product: peptide ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTTSTTATARPAAEETPLRRFVRQFCASRAAVIGVIVLAIIIVVALAAPWIAPQNPYDLSRLDVLDSRLAPGEKSGDGMI
FLLGSDDQGRDILSAILYGLRISVGVGAVSTVIALALGTVLGLIAGFAGGRIESLIMRIADLQLSFPPILLALILLALLR
PGLANIVIALVAVQWAYYARTTRSAALVERRREYIEAAQVLGLPPSRIMFRHLLPNCLPPLIVIAALQVASAITLEATLS
FLGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSMNLVSDQLRDVLNPRLQTL

Sequences:

>Translated_304_residues
MTTSTTATARPAAEETPLRRFVRQFCASRAAVIGVIVLAIIIVVALAAPWIAPQNPYDLSRLDVLDSRLAPGEKSGDGMI
FLLGSDDQGRDILSAILYGLRISVGVGAVSTVIALALGTVLGLIAGFAGGRIESLIMRIADLQLSFPPILLALILLALLR
PGLANIVIALVAVQWAYYARTTRSAALVERRREYIEAAQVLGLPPSRIMFRHLLPNCLPPLIVIAALQVASAITLEATLS
FLGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSMNLVSDQLRDVLNPRLQTL
>Mature_303_residues
TTSTTATARPAAEETPLRRFVRQFCASRAAVIGVIVLAIIIVVALAAPWIAPQNPYDLSRLDVLDSRLAPGEKSGDGMIF
LLGSDDQGRDILSAILYGLRISVGVGAVSTVIALALGTVLGLIAGFAGGRIESLIMRIADLQLSFPPILLALILLALLRP
GLANIVIALVAVQWAYYARTTRSAALVERRREYIEAAQVLGLPPSRIMFRHLLPNCLPPLIVIAALQVASAITLEATLSF
LGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSMNLVSDQLRDVLNPRLQTL

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=288, Percent_Identity=43.0555555555556, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1787760, Length=302, Percent_Identity=35.4304635761589, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1787054, Length=296, Percent_Identity=34.1216216216216, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789889, Length=248, Percent_Identity=35.8870967741936, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1787498, Length=278, Percent_Identity=36.3309352517986, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788505, Length=218, Percent_Identity=30.7339449541284, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787549, Length=286, Percent_Identity=29.7202797202797, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32545; Mature: 32414

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTTATARPAAEETPLRRFVRQFCASRAAVIGVIVLAIIIVVALAAPWIAPQNPYDLS
CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RLDVLDSRLAPGEKSGDGMIFLLGSDDQGRDILSAILYGLRISVGVGAVSTVIALALGTV
HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLIAGFAGGRIESLIMRIADLQLSFPPILLALILLALLRPGLANIVIALVAVQWAYYAR
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TTRSAALVERRREYIEAAQVLGLPPSRIMFRHLLPNCLPPLIVIAALQVASAITLEATLS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSMNLVSDQLRDVLNPR
HHHCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTL
HHCC
>Mature Secondary Structure 
TTSTTATARPAAEETPLRRFVRQFCASRAAVIGVIVLAIIIVVALAAPWIAPQNPYDLS
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RLDVLDSRLAPGEKSGDGMIFLLGSDDQGRDILSAILYGLRISVGVGAVSTVIALALGTV
HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLIAGFAGGRIESLIMRIADLQLSFPPILLALILLALLRPGLANIVIALVAVQWAYYAR
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TTRSAALVERRREYIEAAQVLGLPPSRIMFRHLLPNCLPPLIVIAALQVASAITLEATLS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSMNLVSDQLRDVLNPR
HHHCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]