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The map label for this gene is dppB1 [H]

Identifier: 17547588

GI number: 17547588

Start: 3091327

End: 3092304

Strand: Reverse

Name: dppB1 [H]

Synonym: RSc2869

Alternate gene names: 17547588

Gene position: 3092304-3091327 (Counterclockwise)

Preceding gene: 17547589

Following gene: 17547587

Centisome position: 83.21

GC content: 64.21

Gene sequence:

>978_bases
ATGCTGGTGTTCCTGATTCGACGGCTGCTGGAATCGGTGGCGGTGTTGCTGGTGATGTCGATCCTGGTGTTCCTGGGCGT
GTACGCCATTGGCAATCCGGTCGACATCCTCATCAACCCGCAGGCGGACCAGCAGGACATCGCGCGCACGATTGCCGCGC
TGGGGCTCGACAAGCCGCTGTGGCAGCAGTACCTGTACTTCCTGAAGGGCGCGCTGCAGGGCAACCTGGGCGTGTCGTTC
GCGCACGGCACGCCCGCACTCAAGCTGATCTTCGAGCGCATGCCGGCGACGTTCGAGCTGGCGGCGTTCGCCATGCTGCT
GGCGATCGTGCTGGGGATTCCGCTCGGGCTGTGGGCGGGGCTGCGGCCGAACGGGGTGGCCAACCGCACCATCATGACGG
TGTCGATCCTGGGGTTTTCGCTGCCGACGTTCTGGGTCGGGCTGATGCTGATCATGGTGTTCGCGGTGCAGCTGGGCTGG
CTGCCGTCCAACGGGCGGGGCGAGACGCGGTTGCTGTTCGGCATCCCGGTGAGCTTTCTGACGCTCGACGGGCTGCGGCA
CCTGATCCTGCCGGGCGTGACACTGTCGCTGCTCAACATCGCCATGGTGATCAGGCTGACGCGCGCGGGGACACAGGAGG
CGATGCTGCAGGACTACGTGAAGTTCGCGCGCGCCAAGGGGCTGTCGAACGCGCGCATCGTCGGGGTGCATGTGCTGAAG
AACATCCTGATCCCGATCGTGACGGTGGTGGGCCTGCAGTTCGGTTCGGTGATCGCGTTTTCCATCGTCACCGAATCGAT
CTACGCCTGGCCGGGGATGGGCAAGCTGATCATCGATTCGATCCAACTGCTCGACCGTCCGGTGATCGTGGCCTATCTGC
TGGTGATCGTGACGCTGTTCATCCTGATCAATCTGGTGGTCGACCTGATCTACGGCGTGCTCGATCCGCGCGTGCGCCTG
TCCGAAAGCCGGAGCTGA

Upstream 100 bases:

>100_bases
ACCTATACGCCGCGCACCGACGAACGCACTTACGCGCAGGGCTTCATGCCGCAGTAATGTCGTCGTCGCTTCCATTCACA
CGTAACCGGGCGAGTCTCCG

Downstream 100 bases:

>100_bases
CATGACGACTTCCACCACCGCGACCGCCAGGCCGGCCGCAGAAGAAACGCCGCTGCGCCGCTTCGTGCGCCAGTTCTGCG
CCAGCCGCGCGGCGGTGATC

Product: transmembrane dipeptide transport system permease ABC transporter protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLVFLIRRLLESVAVLLVMSILVFLGVYAIGNPVDILINPQADQQDIARTIAALGLDKPLWQQYLYFLKGALQGNLGVSF
AHGTPALKLIFERMPATFELAAFAMLLAIVLGIPLGLWAGLRPNGVANRTIMTVSILGFSLPTFWVGLMLIMVFAVQLGW
LPSNGRGETRLLFGIPVSFLTLDGLRHLILPGVTLSLLNIAMVIRLTRAGTQEAMLQDYVKFARAKGLSNARIVGVHVLK
NILIPIVTVVGLQFGSVIAFSIVTESIYAWPGMGKLIIDSIQLLDRPVIVAYLLVIVTLFILINLVVDLIYGVLDPRVRL
SESRS

Sequences:

>Translated_325_residues
MLVFLIRRLLESVAVLLVMSILVFLGVYAIGNPVDILINPQADQQDIARTIAALGLDKPLWQQYLYFLKGALQGNLGVSF
AHGTPALKLIFERMPATFELAAFAMLLAIVLGIPLGLWAGLRPNGVANRTIMTVSILGFSLPTFWVGLMLIMVFAVQLGW
LPSNGRGETRLLFGIPVSFLTLDGLRHLILPGVTLSLLNIAMVIRLTRAGTQEAMLQDYVKFARAKGLSNARIVGVHVLK
NILIPIVTVVGLQFGSVIAFSIVTESIYAWPGMGKLIIDSIQLLDRPVIVAYLLVIVTLFILINLVVDLIYGVLDPRVRL
SESRS
>Mature_325_residues
MLVFLIRRLLESVAVLLVMSILVFLGVYAIGNPVDILINPQADQQDIARTIAALGLDKPLWQQYLYFLKGALQGNLGVSF
AHGTPALKLIFERMPATFELAAFAMLLAIVLGIPLGLWAGLRPNGVANRTIMTVSILGFSLPTFWVGLMLIMVFAVQLGW
LPSNGRGETRLLFGIPVSFLTLDGLRHLILPGVTLSLLNIAMVIRLTRAGTQEAMLQDYVKFARAKGLSNARIVGVHVLK
NILIPIVTVVGLQFGSVIAFSIVTESIYAWPGMGKLIIDSIQLLDRPVIVAYLLVIVTLFILINLVVDLIYGVLDPRVRL
SESRS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=340, Percent_Identity=37.0588235294118, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=38.75, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1789888, Length=326, Percent_Identity=34.9693251533742, Blast_Score=204, Evalue=9e-54,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=34.3065693430657, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=32.5077399380805, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI1787761, Length=301, Percent_Identity=36.8770764119601, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1788504, Length=282, Percent_Identity=25.177304964539, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35537; Mature: 35537

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVFLIRRLLESVAVLLVMSILVFLGVYAIGNPVDILINPQADQQDIARTIAALGLDKPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHH
WQQYLYFLKGALQGNLGVSFAHGTPALKLIFERMPATFELAAFAMLLAIVLGIPLGLWAG
HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
LRPNGVANRTIMTVSILGFSLPTFWVGLMLIMVFAVQLGWLPSNGRGETRLLFGIPVSFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
TLDGLRHLILPGVTLSLLNIAMVIRLTRAGTQEAMLQDYVKFARAKGLSNARIVGVHVLK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NILIPIVTVVGLQFGSVIAFSIVTESIYAWPGMGKLIIDSIQLLDRPVIVAYLLVIVTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
ILINLVVDLIYGVLDPRVRLSESRS
HHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MLVFLIRRLLESVAVLLVMSILVFLGVYAIGNPVDILINPQADQQDIARTIAALGLDKPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHH
WQQYLYFLKGALQGNLGVSFAHGTPALKLIFERMPATFELAAFAMLLAIVLGIPLGLWAG
HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
LRPNGVANRTIMTVSILGFSLPTFWVGLMLIMVFAVQLGWLPSNGRGETRLLFGIPVSFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
TLDGLRHLILPGVTLSLLNIAMVIRLTRAGTQEAMLQDYVKFARAKGLSNARIVGVHVLK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NILIPIVTVVGLQFGSVIAFSIVTESIYAWPGMGKLIIDSIQLLDRPVIVAYLLVIVTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
ILINLVVDLIYGVLDPRVRLSESRS
HHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]