| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547484
Identifier: 17547484
GI number: 17547484
Start: 2976177
End: 2976773
Strand: Reverse
Name: 17547484
Synonym: RSc2765
Alternate gene names: NA
Gene position: 2976773-2976177 (Counterclockwise)
Preceding gene: 17547485
Following gene: 17547479
Centisome position: 80.1
GC content: 64.32
Gene sequence:
>597_bases ATGACGACCAACATGTTTGGGCTGGACGACTCGCTCACCGCTCGCGATGAGCGCGTTGCCCGCGAGACGTGGCACAAGGC GCAGAACCTGTACGACGGTGTGCTTGGGATGCAGTCCCTCGGCCCGCGTGTCGGGGGGGCGGCCAAGCTCATGCCGCAAG ACGCCAATCTGAAGGACGACGGAGGTCGCGAAGACGCCATGAACCTGTTCAAGACGGTGCGTCCGAATATCGTGCAATCG ATCCGCGCGTTCCGCGTGGCCGACCTGGCCGAGGCGGCGACCGGCCTGGGCCAGCATTTCCTCTATGCCAACTGCGCGGC AGCGACCACCAAGGGCGAAGTGCTCGACGTGATCGCGCGCGAGTTCCTGTTCCCCAAGCATTTCGGCAAGAACTTCGATG CGCTGGCCGATTGCCTGACCGACATGATCTTCAAGGCCGGCCCGCAGCCGGGCTTCGTGATCGTACTGGAGGGCCTGCCC TGCGCGCCCAAGTTCGACAAGGAAGCGCGCGAGACGCTGCTGGACGTGTTCCGCGATGCGGCCGAGTTCTGGGGCGAGCG CAAGGTGCAGTTCCGCGTGTTCTATTCGTTTGCCTGA
Upstream 100 bases:
>100_bases ATCGTGGCGCCAGACGCATCATCTGCGGCGGCGACCAGCGCGCGGCCAACGATTGCTACTACACGGAAGATCACTACAAC AGCTTTCAACGGATACAGCG
Downstream 100 bases:
>100_bases GCGTCCCGGCCCGTTGGCGCCGCCTTGAGCGGCAATGCATGAAAAAGCCCGCAAATTGCGGGCTTTTCTGTTTGCGGCGC CGTGCGTTCAGGCGTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Barstar Family Protein; Ribonuclease Inhibitor Barstar; Ribonuclease Inhibitor
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTTNMFGLDDSLTARDERVARETWHKAQNLYDGVLGMQSLGPRVGGAAKLMPQDANLKDDGGREDAMNLFKTVRPNIVQS IRAFRVADLAEAATGLGQHFLYANCAAATTKGEVLDVIAREFLFPKHFGKNFDALADCLTDMIFKAGPQPGFVIVLEGLP CAPKFDKEARETLLDVFRDAAEFWGERKVQFRVFYSFA
Sequences:
>Translated_198_residues MTTNMFGLDDSLTARDERVARETWHKAQNLYDGVLGMQSLGPRVGGAAKLMPQDANLKDDGGREDAMNLFKTVRPNIVQS IRAFRVADLAEAATGLGQHFLYANCAAATTKGEVLDVIAREFLFPKHFGKNFDALADCLTDMIFKAGPQPGFVIVLEGLP CAPKFDKEARETLLDVFRDAAEFWGERKVQFRVFYSFA >Mature_197_residues TTNMFGLDDSLTARDERVARETWHKAQNLYDGVLGMQSLGPRVGGAAKLMPQDANLKDDGGREDAMNLFKTVRPNIVQSI RAFRVADLAEAATGLGQHFLYANCAAATTKGEVLDVIAREFLFPKHFGKNFDALADCLTDMIFKAGPQPGFVIVLEGLPC APKFDKEARETLLDVFRDAAEFWGERKVQFRVFYSFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21971; Mature: 21840
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNMFGLDDSLTARDERVARETWHKAQNLYDGVLGMQSLGPRVGGAAKLMPQDANLKDD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC GGREDAMNLFKTVRPNIVQSIRAFRVADLAEAATGLGQHFLYANCAAATTKGEVLDVIAR CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH EFLFPKHFGKNFDALADCLTDMIFKAGPQPGFVIVLEGLPCAPKFDKEARETLLDVFRDA HHHCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH AEFWGERKVQFRVFYSFA HHHHCCCCEEEEEEEECC >Mature Secondary Structure TTNMFGLDDSLTARDERVARETWHKAQNLYDGVLGMQSLGPRVGGAAKLMPQDANLKDD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC GGREDAMNLFKTVRPNIVQSIRAFRVADLAEAATGLGQHFLYANCAAATTKGEVLDVIAR CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH EFLFPKHFGKNFDALADCLTDMIFKAGPQPGFVIVLEGLPCAPKFDKEARETLLDVFRDA HHHCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH AEFWGERKVQFRVFYSFA HHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA