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The map label for this gene is rnaSA3 [H]

Identifier: 17547485

GI number: 17547485

Start: 2976770

End: 2977201

Strand: Reverse

Name: rnaSA3 [H]

Synonym: RSc2766

Alternate gene names: 17547485

Gene position: 2977201-2976770 (Counterclockwise)

Preceding gene: 17547486

Following gene: 17547484

Centisome position: 80.11

GC content: 64.12

Gene sequence:

>432_bases
ATGACAAAGCGACTTGGGGCGTGGATCGGCCGCTCCGTATCTCAGGCGATGGTGCGGGGCGCGCTGGCGGCGATGCTTGC
GCTGTCGGTCGCCGGGCTGCCAACGGCGGCGGCCGCCCGGGACACCACCGGCATGTCGGCGGCGGTGGGAACCATTCCCG
CGGTGGACCTGCCCAATGAAGCGCAGCGCACGCTGGTACAGATCGAGCAGGGTGGTCCGTTTCCTTATGCGAAAGATGGC
ACCACGTTTGGCAATTATGAAGGCCGTTTGCCGGCACGAAAGCGTGGCTACTACCGCGAGTACACCGTGAAGACGCGCGG
TGCGCGCAATCGTGGCGCCAGACGCATCATCTGCGGCGGCGACCAGCGCGCGGCCAACGATTGCTACTACACGGAAGATC
ACTACAACAGCTTTCAACGGATACAGCGATGA

Upstream 100 bases:

>100_bases
GCTGCAATCGAGCTGCCCGGACCGTGATCCGGCGGCCGCATGCGCTTGTGACCTGCGCCGGGCTGACCGGTCGGCGTGAT
TCTCCCGTTTGGGCTTGCTG

Downstream 100 bases:

>100_bases
CGACCAACATGTTTGGGCTGGACGACTCGCTCACCGCTCGCGATGAGCGCGTTGCCCGCGAGACGTGGCACAAGGCGCAG
AACCTGTACGACGGTGTGCT

Product: guanyl-specific ribonuclease precursor signal peptide protein

Products: NA

Alternate protein names: RNase Sa3 [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTKRLGAWIGRSVSQAMVRGALAAMLALSVAGLPTAAAARDTTGMSAAVGTIPAVDLPNEAQRTLVQIEQGGPFPYAKDG
TTFGNYEGRLPARKRGYYREYTVKTRGARNRGARRIICGGDQRAANDCYYTEDHYNSFQRIQR

Sequences:

>Translated_143_residues
MTKRLGAWIGRSVSQAMVRGALAAMLALSVAGLPTAAAARDTTGMSAAVGTIPAVDLPNEAQRTLVQIEQGGPFPYAKDG
TTFGNYEGRLPARKRGYYREYTVKTRGARNRGARRIICGGDQRAANDCYYTEDHYNSFQRIQR
>Mature_142_residues
TKRLGAWIGRSVSQAMVRGALAAMLALSVAGLPTAAAARDTTGMSAAVGTIPAVDLPNEAQRTLVQIEQGGPFPYAKDGT
TFGNYEGRLPARKRGYYREYTVKTRGARNRGARRIICGGDQRAANDCYYTEDHYNSFQRIQR

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 15605; Mature: 15474

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLGAWIGRSVSQAMVRGALAAMLALSVAGLPTAAAARDTTGMSAAVGTIPAVDLPNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHCCCCCCCCCCH
AQRTLVQIEQGGPFPYAKDGTTFGNYEGRLPARKRGYYREYTVKTRGARNRGARRIICGG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEECC
DQRAANDCYYTEDHYNSFQRIQR
CCCCCCCCEECHHHHHHHHHHCC
>Mature Secondary Structure 
TKRLGAWIGRSVSQAMVRGALAAMLALSVAGLPTAAAARDTTGMSAAVGTIPAVDLPNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHCCCCCCCCCCH
AQRTLVQIEQGGPFPYAKDGTTFGNYEGRLPARKRGYYREYTVKTRGARNRGARRIICGG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEECC
DQRAANDCYYTEDHYNSFQRIQR
CCCCCCCCEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1398084 [H]