| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is aac [H]
Identifier: 17547266
GI number: 17547266
Start: 2754482
End: 2756869
Strand: Direct
Name: aac [H]
Synonym: RSc2547
Alternate gene names: 17547266
Gene position: 2754482-2756869 (Clockwise)
Preceding gene: 17547265
Following gene: 17547269
Centisome position: 74.12
GC content: 70.9
Gene sequence:
>2388_bases ATGACGCACGGATTCGCACTGCGCAACACGCTCGCCGTGGCCGCGCTCGCAGCGCTGGCCGGCTGCGCGGGCACGGCGCA CGGCAGCCGTTGGGACACGCCGTCCGACACCGGCCTATCGGCCGAGATCCGCCGCACCGGCTTCGGCATTCCGCACATCC GCGCCAACGACTACGCCGGCCTCGGCTTCGGCATGGCCTATGCCTATGCGCAGGACAATCTCTGCCTGCTCGCCGACCAG GTCGTCACCGTCAACGGCGAGCGCGCGAAGACGTTCGGGCCGGACGGCACCGCCACCGTGTCGTTCAAGTCCATCCCCAA CACTCGCTCGGATGCGTTCTTCAAGGGCATCGTCGATGCGGCCGCGCTGCGTGACGGCTATGCGCGGATGTCGCCCGAGG CGCGCGAACTGCTGCGCGGCTACATCGCCGGCTACAACCGCTACCTGAAGGACACCCCGCCGGCCGACTTCCCCGCCGCG TGCCGCAACGCCGCCTGGGTGCGCCCGCTCACGCTGGCCGACATGATGCGCATGGGCGAGGAGAAGGCGATCCAGGCCAG CGCCGGCGCGATGCTGGCCGGCATCGTCGATGCGCAGCCGCCGGGCCGGGCGCCCGTGACCCATACGGTGGTCCCGCCGC ACGCCGTCGATGTCGCCGCGCTCGACCGCGAGCTGCGGCTGCGCGACCTGCCCATCGGCAGCAACGGCTGGGCCTTCGGC AGTGCCGCCACGGAGAACCGGCGCGGCGTGCTGCTCGGCAACCCGCACTTCCCGTGGACGACCACCAACCGCTTCTACGA AGTCCACCTGACCGTGCCCGGCAAGCTCGACGTGATGGGCGCGTCGATCGCCGCCTTCCCCGTCGTCAGCATCGGCTTCA ACCGCGACGTGGCGTGGACCCACACGGTCTCCACCGGCCGCCGCTTCACGCTGTTCGAGCTCAGGCTAGCCGAGGGCGAC CCCACCACCTATCTGGTCGACGGCACGCCGCACAAGATGACCGCGCGCACGGTCGCCTTCGACGTGAAGCTGCCCGACGG CCGCATCGAGCGCCGCGCACACACCTTTTACGACACCGAATACGGCCCGGTGGTGTCGATGCCCGCCGCCGGCATGCCGT GGACCACGCAGAAAGCCTATGCGCTGCGCGATGCCAACCGCGGCAACACGCGCATGATCGACGCCTGGCTGCACATCGCG CAAGCCGGGGATGTGGCCGGCATCCACCGGGCGATCGGCAACCTGGGCATTCCGTGGGTCAACACCATCGCCGCGGACCG CAACGGCCGCGCGCTGTTCGTCGACGTGTCGGCCACGCCCGACGTCTCGGCCGAGACACTCAAGCGCTGTGCCCCGTCGC CGCTGGCCGAGCGGCTGTTTAAAGGCGCCGGCCTGGTGCTGCTGGACGGCGCGCGCAGCACCTGCAACTGGCAGGTCGAT CCGGCCTCGCCGGTGCCGGGGCTGATCGCGCCCGCGCGCATGCCGGCGCTCGAGCGCGACGACTTCGTCGCCAACAGCAA CGACAGTTCGTGGCTGACCAACCCGGCGCAGAAGCTCACCGGCTTCCCGCCGATCATGGGCGAGACCGACGTGCCGCAGC GCCTGCGCACCCGCATCGGCCTGATCGAGATCGGCCGCCGCCTGGCCGGCGCCGACGGCCTGCCGGGCAACCGCATCGAC CTGCCGAACCTGCAGGCGATGCTCTTCCGCAATACCAACCTCGCCGGCCACCTGGTGCTGGGCGATCTGCTCGAAGCCTG CAAGGCCGCGCGCGACGCCGATGCCGACGTGCGCAACGGCTGCGTCGCCCTGGGCCGGTGGAATCGCACCGCCGCCGCCA ATGCCCGCGCCGCCCACCTGTTCCGCGAGTTCTGGATGCGCGCCAAGGACATTCCGCAGGTCTACGCCACCGACTTCAAC CCGGACGACCCGATCTACACGCCGCGCGGCCTGCGCATGCACGACGCGACCGTACGCGCCACCGTGTTCAAGGCGCTCAA GGACGCGGTGGGCGCGGTGCGCGCGGCCGGCTTCGCGCTGGATGCCCCGCTCGGCACCGTGCAGGCGGTGCGCCTGCCGG ACGGCGACATCGCGCTGCATGGCGGCGAGGAGTACGAAGGCGTGCTCAACAAGCTGCAGAGCCTGCCGATCGGACCGCAG GGCCTGCAGGTTGACGAGGGCACCAGCTACGTCCAGACCGTCGGCTTCGACGCTCAGGGCCCCGTCGCGCAGGCCCTGCT GGTCTACGGCGAATCGACCGACCCGGCCTCGCCGCACGCCTTCGACCAGATGCGTGCGTTCTCGGCCAAGCGGTGGATCC GCCTGCCGTTCTCGGAGGCCGCCATCGCCGCCGATCCGGCGCTGAAGGTGACAAAGCTGTCGCAGTGA
Upstream 100 bases:
>100_bases GCAGGCATGCCGCTTTCGCAGCGACCACGCCGATCGGCGATGCGGCCATGGCTGCGCACGGCGCGCCTCGCCCCCCGACA CCGACGACAGGAGACACCGC
Downstream 100 bases:
>100_bases ACGCGGCCGGTGCGCCAAAAAGCAAACGCCCCGCGCGTGCGGGGCGTTTGCCTGAACCGGCGGGCACGATGACGAAGTGC GCCCTCTTGTGTGATGGCCG
Product: aculeacin A acylase transmembrane protein
Products: NA
Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MTHGFALRNTLAVAALAALAGCAGTAHGSRWDTPSDTGLSAEIRRTGFGIPHIRANDYAGLGFGMAYAYAQDNLCLLADQ VVTVNGERAKTFGPDGTATVSFKSIPNTRSDAFFKGIVDAAALRDGYARMSPEARELLRGYIAGYNRYLKDTPPADFPAA CRNAAWVRPLTLADMMRMGEEKAIQASAGAMLAGIVDAQPPGRAPVTHTVVPPHAVDVAALDRELRLRDLPIGSNGWAFG SAATENRRGVLLGNPHFPWTTTNRFYEVHLTVPGKLDVMGASIAAFPVVSIGFNRDVAWTHTVSTGRRFTLFELRLAEGD PTTYLVDGTPHKMTARTVAFDVKLPDGRIERRAHTFYDTEYGPVVSMPAAGMPWTTQKAYALRDANRGNTRMIDAWLHIA QAGDVAGIHRAIGNLGIPWVNTIAADRNGRALFVDVSATPDVSAETLKRCAPSPLAERLFKGAGLVLLDGARSTCNWQVD PASPVPGLIAPARMPALERDDFVANSNDSSWLTNPAQKLTGFPPIMGETDVPQRLRTRIGLIEIGRRLAGADGLPGNRID LPNLQAMLFRNTNLAGHLVLGDLLEACKAARDADADVRNGCVALGRWNRTAAANARAAHLFREFWMRAKDIPQVYATDFN PDDPIYTPRGLRMHDATVRATVFKALKDAVGAVRAAGFALDAPLGTVQAVRLPDGDIALHGGEEYEGVLNKLQSLPIGPQ GLQVDEGTSYVQTVGFDAQGPVAQALLVYGESTDPASPHAFDQMRAFSAKRWIRLPFSEAAIAADPALKVTKLSQ
Sequences:
>Translated_795_residues MTHGFALRNTLAVAALAALAGCAGTAHGSRWDTPSDTGLSAEIRRTGFGIPHIRANDYAGLGFGMAYAYAQDNLCLLADQ VVTVNGERAKTFGPDGTATVSFKSIPNTRSDAFFKGIVDAAALRDGYARMSPEARELLRGYIAGYNRYLKDTPPADFPAA CRNAAWVRPLTLADMMRMGEEKAIQASAGAMLAGIVDAQPPGRAPVTHTVVPPHAVDVAALDRELRLRDLPIGSNGWAFG SAATENRRGVLLGNPHFPWTTTNRFYEVHLTVPGKLDVMGASIAAFPVVSIGFNRDVAWTHTVSTGRRFTLFELRLAEGD PTTYLVDGTPHKMTARTVAFDVKLPDGRIERRAHTFYDTEYGPVVSMPAAGMPWTTQKAYALRDANRGNTRMIDAWLHIA QAGDVAGIHRAIGNLGIPWVNTIAADRNGRALFVDVSATPDVSAETLKRCAPSPLAERLFKGAGLVLLDGARSTCNWQVD PASPVPGLIAPARMPALERDDFVANSNDSSWLTNPAQKLTGFPPIMGETDVPQRLRTRIGLIEIGRRLAGADGLPGNRID LPNLQAMLFRNTNLAGHLVLGDLLEACKAARDADADVRNGCVALGRWNRTAAANARAAHLFREFWMRAKDIPQVYATDFN PDDPIYTPRGLRMHDATVRATVFKALKDAVGAVRAAGFALDAPLGTVQAVRLPDGDIALHGGEEYEGVLNKLQSLPIGPQ GLQVDEGTSYVQTVGFDAQGPVAQALLVYGESTDPASPHAFDQMRAFSAKRWIRLPFSEAAIAADPALKVTKLSQ >Mature_794_residues THGFALRNTLAVAALAALAGCAGTAHGSRWDTPSDTGLSAEIRRTGFGIPHIRANDYAGLGFGMAYAYAQDNLCLLADQV VTVNGERAKTFGPDGTATVSFKSIPNTRSDAFFKGIVDAAALRDGYARMSPEARELLRGYIAGYNRYLKDTPPADFPAAC RNAAWVRPLTLADMMRMGEEKAIQASAGAMLAGIVDAQPPGRAPVTHTVVPPHAVDVAALDRELRLRDLPIGSNGWAFGS AATENRRGVLLGNPHFPWTTTNRFYEVHLTVPGKLDVMGASIAAFPVVSIGFNRDVAWTHTVSTGRRFTLFELRLAEGDP TTYLVDGTPHKMTARTVAFDVKLPDGRIERRAHTFYDTEYGPVVSMPAAGMPWTTQKAYALRDANRGNTRMIDAWLHIAQ AGDVAGIHRAIGNLGIPWVNTIAADRNGRALFVDVSATPDVSAETLKRCAPSPLAERLFKGAGLVLLDGARSTCNWQVDP ASPVPGLIAPARMPALERDDFVANSNDSSWLTNPAQKLTGFPPIMGETDVPQRLRTRIGLIEIGRRLAGADGLPGNRIDL PNLQAMLFRNTNLAGHLVLGDLLEACKAARDADADVRNGCVALGRWNRTAAANARAAHLFREFWMRAKDIPQVYATDFNP DDPIYTPRGLRMHDATVRATVFKALKDAVGAVRAAGFALDAPLGTVQAVRLPDGDIALHGGEEYEGVLNKLQSLPIGPQG LQVDEGTSYVQTVGFDAQGPVAQALLVYGESTDPASPHAFDQMRAFSAKRWIRLPFSEAAIAADPALKVTKLSQ
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 85475; Mature: 85344
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGFALRNTLAVAALAALAGCAGTAHGSRWDTPSDTGLSAEIRRTGFGIPHIRANDYAG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC LGFGMAYAYAQDNLCLLADQVVTVNGERAKTFGPDGTATVSFKSIPNTRSDAFFKGIVDA CCHHHEEEECCCCEEEEECEEEEECCCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHH AALRDGYARMSPEARELLRGYIAGYNRYLKDTPPADFPAACRNAAWVRPLTLADMMRMGE HHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCH EKAIQASAGAMLAGIVDAQPPGRAPVTHTVVPPHAVDVAALDRELRLRDLPIGSNGWAFG HHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCHHHHEECCCCCCCCCCC SAATENRRGVLLGNPHFPWTTTNRFYEVHLTVPGKLDVMGASIAAFPVVSIGFNRDVAWT CCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHCEEEEECCCCCEEEE HTVSTGRRFTLFELRLAEGDPTTYLVDGTPHKMTARTVAFDVKLPDGRIERRAHTFYDTE EECCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHEECCC YGPVVSMPAAGMPWTTQKAYALRDANRGNTRMIDAWLHIAQAGDVAGIHRAIGNLGIPWV CCCEEECCCCCCCCCCCHHHEEECCCCCCCEEEEHHHHHHHCCCHHHHHHHHHCCCCCCH NTIAADRNGRALFVDVSATPDVSAETLKRCAPSPLAERLFKGAGLVLLDGARSTCNWQVD HHEECCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCEEEEC PASPVPGLIAPARMPALERDDFVANSNDSSWLTNPAQKLTGFPPIMGETDVPQRLRTRIG CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH LIEIGRRLAGADGLPGNRIDLPNLQAMLFRNTNLAGHLVLGDLLEACKAARDADADVRNG HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCC CVALGRWNRTAAANARAAHLFREFWMRAKDIPQVYATDFNPDDPIYTPRGLRMHDATVRA EEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECHHHHH TVFKALKDAVGAVRAAGFALDAPLGTVQAVRLPDGDIALHGGEEYEGVLNKLQSLPIGPQ HHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCC GLQVDEGTSYVQTVGFDAQGPVAQALLVYGESTDPASPHAFDQMRAFSAKRWIRLPFSEA CCEECCCCCEEEEECCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCC AIAADPALKVTKLSQ HHCCCCCEEEEECCC >Mature Secondary Structure THGFALRNTLAVAALAALAGCAGTAHGSRWDTPSDTGLSAEIRRTGFGIPHIRANDYAG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC LGFGMAYAYAQDNLCLLADQVVTVNGERAKTFGPDGTATVSFKSIPNTRSDAFFKGIVDA CCHHHEEEECCCCEEEEECEEEEECCCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHH AALRDGYARMSPEARELLRGYIAGYNRYLKDTPPADFPAACRNAAWVRPLTLADMMRMGE HHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCH EKAIQASAGAMLAGIVDAQPPGRAPVTHTVVPPHAVDVAALDRELRLRDLPIGSNGWAFG HHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCHHHHEECCCCCCCCCCC SAATENRRGVLLGNPHFPWTTTNRFYEVHLTVPGKLDVMGASIAAFPVVSIGFNRDVAWT CCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHCEEEEECCCCCEEEE HTVSTGRRFTLFELRLAEGDPTTYLVDGTPHKMTARTVAFDVKLPDGRIERRAHTFYDTE EECCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHEECCC YGPVVSMPAAGMPWTTQKAYALRDANRGNTRMIDAWLHIAQAGDVAGIHRAIGNLGIPWV CCCEEECCCCCCCCCCCHHHEEECCCCCCCEEEEHHHHHHHCCCHHHHHHHHHCCCCCCH NTIAADRNGRALFVDVSATPDVSAETLKRCAPSPLAERLFKGAGLVLLDGARSTCNWQVD HHEECCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCEEEEC PASPVPGLIAPARMPALERDDFVANSNDSSWLTNPAQKLTGFPPIMGETDVPQRLRTRIG CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH LIEIGRRLAGADGLPGNRIDLPNLQAMLFRNTNLAGHLVLGDLLEACKAARDADADVRNG HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCC CVALGRWNRTAAANARAAHLFREFWMRAKDIPQVYATDFNPDDPIYTPRGLRMHDATVRA EEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECHHHHH TVFKALKDAVGAVRAAGFALDAPLGTVQAVRLPDGDIALHGGEEYEGVLNKLQSLPIGPQ HHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCC GLQVDEGTSYVQTVGFDAQGPVAQALLVYGESTDPASPHAFDQMRAFSAKRWIRLPFSEA CCEECCCCCEEEEECCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCC AIAADPALKVTKLSQ HHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA