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The map label for this gene is 17547147

Identifier: 17547147

GI number: 17547147

Start: 2632659

End: 2633828

Strand: Direct

Name: 17547147

Synonym: RSc2428

Alternate gene names: NA

Gene position: 2632659-2633828 (Clockwise)

Preceding gene: 17547146

Following gene: 17547148

Centisome position: 70.84

GC content: 71.71

Gene sequence:

>1170_bases
ATGACGACCCGACGACGCCTGCTGCACGGCCTGGCGCTACTGGCCAGCGCCGCCGCCATCGCCCTGCCCGCCCGCGCCGA
CCTGCGCATTGGCGTGGTGCTGTCGACCACCGGCCCCGCCGCCGCCATCGGCATCCCGACACGGAACACCGTGCAGATGT
GGCCGACGACGCTGGGCGGCCAGCGCGCACAGGTCATCGTGCTGGACGACGCCTCCGACCCCGCGCAAGCGGTGCGCAAC
GTGCGCCGGCTGATCGCCGAGGACCATGTCGATGCGATTGTCGGTCCGACCATCGCGCCGACCGCGCTGGCCTCGCTCGA
TGCGGTGACCGAAGGGCAGACGCCGATGATCGCACTGGCGGCCTCGGCCTCCATCGTCGAGCCGCAGGACACCAAGCGGC
ACTGGGCCTTCAAGATGCCGCAGAACGACTCGCACATGGCCACGCTGGTCACGCAGCACATGGCCGACAGCGGCGTGCGC
ACGGTCGGCTTCATCGGCTTTGCCGACGCCTACGGCGAGAGCTGGTGGCGCGAGTTCTCGAAGCTGGCCGAAGTGCGCGG
GCTGCAGGTGGTCGGCAGCGAGCGCTTCGCCCGCACCGACGCCAGCGTCACGGGCCAGATCCTCAAGCTGATGGCCGCCC
GGCCCGATGCCATCCTGATCGCCGGCGCCGGCACGCCGGCCGCGCTGCCGCAGCGCACCCTGGTCGAGCGCGGCTACAAG
GGCCGCCTCTACCAGACCCACGGCATCGCCAGCACCGAATTCCTGAAGGTGGGCGGCAAGGACGTGGAGGGCACGCTGTT
TCCCACCGGGCCGGTGGTGGTCGCGCGCGAATTGCCGGCCAGCCACCCGGTGAGGCAGGTCGCCGTCGCGTTCGTCGAGC
GCTATGAGGCCCGGTACGGCCCGAACACCGTCACCCAGTTCGCCGGCGATGCCTGGGGCGCATGGCAGCTGCTCGACAAC
GCCGCCGAGCGCGCCCTGAAGACCCGGGCGCAGCCCGGCACGCCCGCCTTCCGCGCCGCCCTGCGCGATGCGCTGGAAAC
CACGCACGGCCTGACCGTGCCCAACGGCGTGCTGAACCTGAATGCCCGCGATCACCAGGGCTTCGACCAGCGCTCGCGCG
TGATGGGCATCATCCGGGACGGACGCTTCGCCTACGCGGGCCCACGCTGA

Upstream 100 bases:

>100_bases
ACGCGCAAGCTGCTCGAGCAGCTGCTGGCGGGCGAGCACGAAGCGTACGAACTGTGAGCGTGCCGCCCGCACCGGTTTCC
CACCCGCTCCCGGAGACCCC

Downstream 100 bases:

>100_bases
CGGGAGACTTGCCATGACACGCATCGCCTTCATCGGCCTCGGCAACATGGGGTCGCCGATGGTCCAACATCTCATCGCGG
CCGGCCATGCCGTGCGCGCC

Product: amino acid-binding periplasmic (PBP) ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTTRRRLLHGLALLASAAAIALPARADLRIGVVLSTTGPAAAIGIPTRNTVQMWPTTLGGQRAQVIVLDDASDPAQAVRN
VRRLIAEDHVDAIVGPTIAPTALASLDAVTEGQTPMIALAASASIVEPQDTKRHWAFKMPQNDSHMATLVTQHMADSGVR
TVGFIGFADAYGESWWREFSKLAEVRGLQVVGSERFARTDASVTGQILKLMAARPDAILIAGAGTPAALPQRTLVERGYK
GRLYQTHGIASTEFLKVGGKDVEGTLFPTGPVVVARELPASHPVRQVAVAFVERYEARYGPNTVTQFAGDAWGAWQLLDN
AAERALKTRAQPGTPAFRAALRDALETTHGLTVPNGVLNLNARDHQGFDQRSRVMGIIRDGRFAYAGPR

Sequences:

>Translated_389_residues
MTTRRRLLHGLALLASAAAIALPARADLRIGVVLSTTGPAAAIGIPTRNTVQMWPTTLGGQRAQVIVLDDASDPAQAVRN
VRRLIAEDHVDAIVGPTIAPTALASLDAVTEGQTPMIALAASASIVEPQDTKRHWAFKMPQNDSHMATLVTQHMADSGVR
TVGFIGFADAYGESWWREFSKLAEVRGLQVVGSERFARTDASVTGQILKLMAARPDAILIAGAGTPAALPQRTLVERGYK
GRLYQTHGIASTEFLKVGGKDVEGTLFPTGPVVVARELPASHPVRQVAVAFVERYEARYGPNTVTQFAGDAWGAWQLLDN
AAERALKTRAQPGTPAFRAALRDALETTHGLTVPNGVLNLNARDHQGFDQRSRVMGIIRDGRFAYAGPR
>Mature_388_residues
TTRRRLLHGLALLASAAAIALPARADLRIGVVLSTTGPAAAIGIPTRNTVQMWPTTLGGQRAQVIVLDDASDPAQAVRNV
RRLIAEDHVDAIVGPTIAPTALASLDAVTEGQTPMIALAASASIVEPQDTKRHWAFKMPQNDSHMATLVTQHMADSGVRT
VGFIGFADAYGESWWREFSKLAEVRGLQVVGSERFARTDASVTGQILKLMAARPDAILIAGAGTPAALPQRTLVERGYKG
RLYQTHGIASTEFLKVGGKDVEGTLFPTGPVVVARELPASHPVRQVAVAFVERYEARYGPNTVTQFAGDAWGAWQLLDNA
AERALKTRAQPGTPAFRAALRDALETTHGLTVPNGVLNLNARDHQGFDQRSRVMGIIRDGRFAYAGPR

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41683; Mature: 41552

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRRLLHGLALLASAAAIALPARADLRIGVVLSTTGPAAAIGIPTRNTVQMWPTTLGG
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEECCCCCCC
QRAQVIVLDDASDPAQAVRNVRRLIAEDHVDAIVGPTIAPTALASLDAVTEGQTPMIALA
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE
ASASIVEPQDTKRHWAFKMPQNDSHMATLVTQHMADSGVRTVGFIGFADAYGESWWREFS
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH
KLAEVRGLQVVGSERFARTDASVTGQILKLMAARPDAILIAGAGTPAALPQRTLVERGYK
HHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCC
GRLYQTHGIASTEFLKVGGKDVEGTLFPTGPVVVARELPASHPVRQVAVAFVERYEARYG
CCEEEECCCCCCHHEECCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PNTVTQFAGDAWGAWQLLDNAAERALKTRAQPGTPAFRAALRDALETTHGLTVPNGVLNL
CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEC
NARDHQGFDQRSRVMGIIRDGRFAYAGPR
CCCCCCCCCHHHHHHEEEECCEEECCCCC
>Mature Secondary Structure 
TTRRRLLHGLALLASAAAIALPARADLRIGVVLSTTGPAAAIGIPTRNTVQMWPTTLGG
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEECCCCCCC
QRAQVIVLDDASDPAQAVRNVRRLIAEDHVDAIVGPTIAPTALASLDAVTEGQTPMIALA
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEE
ASASIVEPQDTKRHWAFKMPQNDSHMATLVTQHMADSGVRTVGFIGFADAYGESWWREFS
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH
KLAEVRGLQVVGSERFARTDASVTGQILKLMAARPDAILIAGAGTPAALPQRTLVERGYK
HHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCC
GRLYQTHGIASTEFLKVGGKDVEGTLFPTGPVVVARELPASHPVRQVAVAFVERYEARYG
CCEEEECCCCCCHHEECCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PNTVTQFAGDAWGAWQLLDNAAERALKTRAQPGTPAFRAALRDALETTHGLTVPNGVLNL
CCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEC
NARDHQGFDQRSRVMGIIRDGRFAYAGPR
CCCCCCCCCHHHHHHEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]