| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547107
Identifier: 17547107
GI number: 17547107
Start: 2596162
End: 2596416
Strand: Direct
Name: 17547107
Synonym: RSc2388
Alternate gene names: NA
Gene position: 2596162-2596416 (Clockwise)
Preceding gene: 17547106
Following gene: 17547110
Centisome position: 69.86
GC content: 52.94
Gene sequence:
>255_bases ATGGCCGGCAATCGCAGCGAATGGTTCGGGCTCTACGCGGACGATCAGCAGATCGACGATGAAGTGTTCTGCGAGGAAGT GAAGCGCGGCAATTTCCGCTTGCACCCCATGGTCGGACGGGGAATTAGCAAAGGCTGCATTACGATCGAGAAACAATCCG ATTTCAATCGCATCCGACTCATGCTGAGAAATGCGGGAACCTCGGCCATACCAGGAACCGACCTGAAAACCTACGGAAAA ATCACTGTAAGATGA
Upstream 100 bases:
>100_bases ACGTGCCAATTCTTGCTTGGCACACTTTGGCCCCATCCCTCCGGGAACGTATTACATCGTGGACCGGAAGTCGGGAGGGA AACTCGGCTGGCTATGGGAT
Downstream 100 bases:
>100_bases GCCCCCCCAAAAAAGCGGGGCTACTGATACTTTGGCTGGTCGCCTTTACATTTCTGTATCTGGTGATATGGAGCCAAAAT CTTGATTATTTCCCACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MAGNRSEWFGLYADDQQIDDEVFCEEVKRGNFRLHPMVGRGISKGCITIEKQSDFNRIRLMLRNAGTSAIPGTDLKTYGK ITVR
Sequences:
>Translated_84_residues MAGNRSEWFGLYADDQQIDDEVFCEEVKRGNFRLHPMVGRGISKGCITIEKQSDFNRIRLMLRNAGTSAIPGTDLKTYGK ITVR >Mature_83_residues AGNRSEWFGLYADDQQIDDEVFCEEVKRGNFRLHPMVGRGISKGCITIEKQSDFNRIRLMLRNAGTSAIPGTDLKTYGKI TVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9524; Mature: 9393
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNRSEWFGLYADDQQIDDEVFCEEVKRGNFRLHPMVGRGISKGCITIEKQSDFNRIRL CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCHHHHHH MLRNAGTSAIPGTDLKTYGKITVR HHHCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure AGNRSEWFGLYADDQQIDDEVFCEEVKRGNFRLHPMVGRGISKGCITIEKQSDFNRIRL CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCHHHHHH MLRNAGTSAIPGTDLKTYGKITVR HHHCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA