| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is panC [H]
Identifier: 17547106
GI number: 17547106
Start: 2595033
End: 2595884
Strand: Direct
Name: panC [H]
Synonym: RSc2387
Alternate gene names: 17547106
Gene position: 2595033-2595884 (Clockwise)
Preceding gene: 17547105
Following gene: 17547107
Centisome position: 69.83
GC content: 67.25
Gene sequence:
>852_bases ATGAAAGTCATCTCCTCGATCCAGGAACTGCGCGACCAGCTGCGCGGCCAGAACCGCGTCGCCTTCGTGCCGACCATGGG CAACCTGCATGAGGGCCACCTGAGCCTGATGCGCCTGGCGCGCCAGCACGGCGACCCGGTGGTCGCGTCGATCTTCGTCA ACCGGCTGCAGTTCGGCCCCAACGAAGACTTCGACAAATACCCGCGCACGCTGCAGGCAGACATCGAGAAGCTGCAGAAG GAAGGCGTCTACGTGCTGTTCGCGCCCACCGAGCGCGACATGTACCCCGAGCCGCAGGAATACCGCGTCGAGCCGCCGCA CGACCTGGGCGACATCCTCGAAGGCGAATTCCGCCCCGGCTTCTTCAAGGGCGTGTGCACGGTGGTGATGAAGCTGTTCT CGTGCGTGCAGCCGCGCGTGGCGGTGTTCGGCAAGAAGGACTACCAGCAGCTGATGATCGTGCGCCGCATGGCCAACCAG TTCGCGCTGCCGGTCGACATCATCCCCGCCGAGACGGTGCGCGCCGAGGACGGCCTGGCGCTGTCGTCGCGCAATGCGTA CCTGTCGAACGAAGAGCGCGCCGAGGCGCCCGAGCTGTATCGCACGCTGGGCCAGGTGCGCCAGACCATGCTGGAAACCG TGCTGCAGGGCCAGGCCTCGGTCGAGGAAGTCACCGCAAAGGCGCTGGAGCACCTGCGCGGACGCGGCTGGCAGCCCGAC TACGTGGCCGTGCGCCGCCGCTCCGACCTGCAGCCGCCGACGCCCGAGAACATCGCCGCCGGCGAACCGCTGGTGGTGCT GACCGCCGCCAAGCTCGGCAAGACGCGCCTGATCGACAACCTGGAAATCTGA
Upstream 100 bases:
>100_bases AGGCCGAACCCTACGCGCCGATCTACGTGCGGCTGGCCTATTCCCCGACCTGATCCCCCTGACCTGATCCGCCGGGTCTG CCGGACTCCAACAAGAACGC
Downstream 100 bases:
>100_bases ATTCAGATTTGCTGAATTGAGAACAACCTAGCTCCACGTAAAATCAAACGCTGCATTTTACCTGGAGCTCTGCGTGTTCT ATTGCAGCTTTGAACTCAAC
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQADIEKLQK EGVYVLFAPTERDMYPEPQEYRVEPPHDLGDILEGEFRPGFFKGVCTVVMKLFSCVQPRVAVFGKKDYQQLMIVRRMANQ FALPVDIIPAETVRAEDGLALSSRNAYLSNEERAEAPELYRTLGQVRQTMLETVLQGQASVEEVTAKALEHLRGRGWQPD YVAVRRRSDLQPPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI
Sequences:
>Translated_283_residues MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQADIEKLQK EGVYVLFAPTERDMYPEPQEYRVEPPHDLGDILEGEFRPGFFKGVCTVVMKLFSCVQPRVAVFGKKDYQQLMIVRRMANQ FALPVDIIPAETVRAEDGLALSSRNAYLSNEERAEAPELYRTLGQVRQTMLETVLQGQASVEEVTAKALEHLRGRGWQPD YVAVRRRSDLQPPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI >Mature_283_residues MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQADIEKLQK EGVYVLFAPTERDMYPEPQEYRVEPPHDLGDILEGEFRPGFFKGVCTVVMKLFSCVQPRVAVFGKKDYQQLMIVRRMANQ FALPVDIIPAETVRAEDGLALSSRNAYLSNEERAEAPELYRTLGQVRQTMLETVLQGQASVEEVTAKALEHLRGRGWQPD YVAVRRRSDLQPPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=286, Percent_Identity=42.6573426573427, Blast_Score=216, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6322046, Length=295, Percent_Identity=36.9491525423729, Blast_Score=164, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 32009; Mature: 32009
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQADIEKLQKEGVYVLFAPTERDMYPEPQEYRVEPPHDLGDILEGEFRPG CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCH FFKGVCTVVMKLFSCVQPRVAVFGKKDYQQLMIVRRMANQFALPVDIIPAETVRAEDGLA HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCE LSSRNAYLSNEERAEAPELYRTLGQVRQTMLETVLQGQASVEEVTAKALEHLRGRGWQPD ECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH YVAVRRRSDLQPPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI HHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHCHHHHHCCCCC >Mature Secondary Structure MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQADIEKLQKEGVYVLFAPTERDMYPEPQEYRVEPPHDLGDILEGEFRPG CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCH FFKGVCTVVMKLFSCVQPRVAVFGKKDYQQLMIVRRMANQFALPVDIIPAETVRAEDGLA HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCE LSSRNAYLSNEERAEAPELYRTLGQVRQTMLETVLQGQASVEEVTAKALEHLRGRGWQPD ECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH YVAVRRRSDLQPPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI HHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA