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The map label for this gene is yfcN [C]

Identifier: 17547062

GI number: 17547062

Start: 2542450

End: 2543115

Strand: Direct

Name: yfcN [C]

Synonym: RSc2343

Alternate gene names: 17547062

Gene position: 2542450-2543115 (Clockwise)

Preceding gene: 17547061

Following gene: 17547063

Centisome position: 68.41

GC content: 72.52

Gene sequence:

>666_bases
ATGAAACGCGCCCACCCTCCCGCCTCCAGGCTCGACCTGACCGACCTGGCCGCCCTGCGCGACCAGCTCAAGCACGAGAC
CGAGCAGCGCGAGGCCGAACGCCAGCGCGCCGAAGCCGCCGCGCGCCAGGCCGAAGCGGAAGCCGACCTGTTCCGCGCCA
GCATCGGCGAAGTGAGCGCGCTGCGCCAGGGCAAGCGGGTCGAGCACCCGCGCACGCCACCCGCGCCGCAGCCCGTGCAC
TCCCGCGCCGAGGAACAGCGCGTACTGCGTGCCTCGCTGTCGGACGAATTCGACGTCGACAACCTGCTCGACACCGACGA
CACCCTCTCCTACCGTCGCCCCGGCATCGGCGAGGATGTGCTCAAGAAACTGCGCCGCGGCGAATGGGCCACGCAAGACC
AGATCGACCTGCACGGCCTGCGCCGCGACGAAGCCCGCGAGGCGCTGGCCGCCTTCCTGCGCCGCGCCGTGCAGCGCGGC
ATCCGCTGCGTGCGCGTGGTCCACGGCAAGGGCCTGGGCTCGCCCGACAAGGCGCCCGTGCTCAAGGGCAAGGTGCGCTC
GTGGCTGGTGCAGAAAGAGGAAGTGATCGCCTTCGTCGAGCCGCGCAACACCGCCGGCGGCGCGGGCGCCGTGCTGGTGC
TGCTGCGCCAGCCGCACGGGTCCTGA

Upstream 100 bases:

>100_bases
GCCGATGGGAAGCCCATCGGCCGTTTTGTTTTGTCATGGCGGCCCGGTGCGCGGGCATTCGTATAATCGACATACGCTCC
ACCCGATCCGTCCTGCCGCC

Downstream 100 bases:

>100_bases
CACGCCGCCTCATCTTCCGCACCGTCCCAATCCCGCAACGATGCACGAAAGCCGCCTGCTGCTGGTGATGCACTGGACGG
AGATCCTCGCGGTCTTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRAHPPASRLDLTDLAALRDQLKHETEQREAERQRAEAAARQAEAEADLFRASIGEVSALRQGKRVEHPRTPPAPQPVH
SRAEEQRVLRASLSDEFDVDNLLDTDDTLSYRRPGIGEDVLKKLRRGEWATQDQIDLHGLRRDEAREALAAFLRRAVQRG
IRCVRVVHGKGLGSPDKAPVLKGKVRSWLVQKEEVIAFVEPRNTAGGAGAVLVLLRQPHGS

Sequences:

>Translated_221_residues
MKRAHPPASRLDLTDLAALRDQLKHETEQREAERQRAEAAARQAEAEADLFRASIGEVSALRQGKRVEHPRTPPAPQPVH
SRAEEQRVLRASLSDEFDVDNLLDTDDTLSYRRPGIGEDVLKKLRRGEWATQDQIDLHGLRRDEAREALAAFLRRAVQRG
IRCVRVVHGKGLGSPDKAPVLKGKVRSWLVQKEEVIAFVEPRNTAGGAGAVLVLLRQPHGS
>Mature_221_residues
MKRAHPPASRLDLTDLAALRDQLKHETEQREAERQRAEAAARQAEAEADLFRASIGEVSALRQGKRVEHPRTPPAPQPVH
SRAEEQRVLRASLSDEFDVDNLLDTDDTLSYRRPGIGEDVLKKLRRGEWATQDQIDLHGLRRDEAREALAAFLRRAVQRG
IRCVRVVHGKGLGSPDKAPVLKGKVRSWLVQKEEVIAFVEPRNTAGGAGAVLVLLRQPHGS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=173, Percent_Identity=31.7919075144509, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787602, Length=181, Percent_Identity=28.7292817679558, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 24650; Mature: 24650

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAHPPASRLDLTDLAALRDQLKHETEQREAERQRAEAAARQAEAEADLFRASIGEVSA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQGKRVEHPRTPPAPQPVHSRAEEQRVLRASLSDEFDVDNLLDTDDTLSYRRPGIGEDV
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHCCCCCCHHH
LKKLRRGEWATQDQIDLHGLRRDEAREALAAFLRRAVQRGIRCVRVVHGKGLGSPDKAPV
HHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
LKGKVRSWLVQKEEVIAFVEPRNTAGGAGAVLVLLRQPHGS
HHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKRAHPPASRLDLTDLAALRDQLKHETEQREAERQRAEAAARQAEAEADLFRASIGEVSA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQGKRVEHPRTPPAPQPVHSRAEEQRVLRASLSDEFDVDNLLDTDDTLSYRRPGIGEDV
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHCCCCCCHHH
LKKLRRGEWATQDQIDLHGLRRDEAREALAAFLRRAVQRGIRCVRVVHGKGLGSPDKAPV
HHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
LKGKVRSWLVQKEEVIAFVEPRNTAGGAGAVLVLLRQPHGS
HHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA