Click here to switch to the map view.

The map label for this gene is yadS [H]

Identifier: 17547063

GI number: 17547063

Start: 2543156

End: 2543779

Strand: Direct

Name: yadS [H]

Synonym: RSc2344

Alternate gene names: 17547063

Gene position: 2543156-2543779 (Clockwise)

Preceding gene: 17547062

Following gene: 17547067

Centisome position: 68.43

GC content: 69.55

Gene sequence:

>624_bases
ATGCACGAAAGCCGCCTGCTGCTGGTGATGCACTGGACGGAGATCCTCGCGGTCTTCTCGTTCGCCGTCTCGGGCCTGGC
CGAGGCGCGGCGGCGCCGGCTCGATGCCGTGGGCGCCTTCATCGTCGCATTCCTCACGGCATTCGGCGGCGGCACGCTGC
GCGACCTGCTGCTCGACCGCCGGCCCTTCTACTGGGTCGAGCACGAGCAGTATCTGCTGGCGCTGTTCGTGATGAGCCTG
TTCGCCAACCGGGTGATCCGGCTGGTCAGCCAGCTGGTGTCGGACCGCGTGCTGATCGTGGCCGATGCGGTCGGCCTGGG
GCTGTTCGGGGTGCTCGGCACGCAGCTGGCGCTGGATGCCGGCGTGCCGGTGTTCGTGTCGGTGATGATGGGCGTGATCA
CGGCCGCGTTCGGCGGCCTGCTGCGCGACGTGGTGTGCAACGAAATCCCGATGCTGCTGCGGGACAACCGCCCGTACGCG
ACCTGCGCCTTCCTCGGATGCTGGCTCTACGTGGGGCTGACCCACACCAGCCTGCAGCCGAGCGTGGCCGTGGTGGTCGC
CACGCTGGCGATCGTGGCGGGCCGGCTGGCGACGCTGCGCTGGAACATCACCCTGCCGCGCTGA

Upstream 100 bases:

>100_bases
AACACCGCCGGCGGCGCGGGCGCCGTGCTGGTGCTGCTGCGCCAGCCGCACGGGTCCTGACACGCCGCCTCATCTTCCGC
ACCGTCCCAATCCCGCAACG

Downstream 100 bases:

>100_bases
CCGGCGCGAGCGCGCCGGCCGCGAGGGCGCGGCCGCTCAGACCGCGGCTTCGTTGGTCTCGCCGGTGCGGATGCGGATGA
CCTGCTCCACCGCCGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MHESRLLLVMHWTEILAVFSFAVSGLAEARRRRLDAVGAFIVAFLTAFGGGTLRDLLLDRRPFYWVEHEQYLLALFVMSL
FANRVIRLVSQLVSDRVLIVADAVGLGLFGVLGTQLALDAGVPVFVSVMMGVITAAFGGLLRDVVCNEIPMLLRDNRPYA
TCAFLGCWLYVGLTHTSLQPSVAVVVATLAIVAGRLATLRWNITLPR

Sequences:

>Translated_207_residues
MHESRLLLVMHWTEILAVFSFAVSGLAEARRRRLDAVGAFIVAFLTAFGGGTLRDLLLDRRPFYWVEHEQYLLALFVMSL
FANRVIRLVSQLVSDRVLIVADAVGLGLFGVLGTQLALDAGVPVFVSVMMGVITAAFGGLLRDVVCNEIPMLLRDNRPYA
TCAFLGCWLYVGLTHTSLQPSVAVVVATLAIVAGRLATLRWNITLPR
>Mature_207_residues
MHESRLLLVMHWTEILAVFSFAVSGLAEARRRRLDAVGAFIVAFLTAFGGGTLRDLLLDRRPFYWVEHEQYLLALFVMSL
FANRVIRLVSQLVSDRVLIVADAVGLGLFGVLGTQLALDAGVPVFVSVMMGVITAAFGGLLRDVVCNEIPMLLRDNRPYA
TCAFLGCWLYVGLTHTSLQPSVAVVVATLAIVAGRLATLRWNITLPR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=182, Percent_Identity=34.6153846153846, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1786352, Length=203, Percent_Identity=36.4532019704434, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22715; Mature: 22715

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESRLLLVMHWTEILAVFSFAVSGLAEARRRRLDAVGAFIVAFLTAFGGGTLRDLLLDR
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
RPFYWVEHEQYLLALFVMSLFANRVIRLVSQLVSDRVLIVADAVGLGLFGVLGTQLALDA
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GVPVFVSVMMGVITAAFGGLLRDVVCNEIPMLLRDNRPYATCAFLGCWLYVGLTHTSLQP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
SVAVVVATLAIVAGRLATLRWNITLPR
HHHHHHHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MHESRLLLVMHWTEILAVFSFAVSGLAEARRRRLDAVGAFIVAFLTAFGGGTLRDLLLDR
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
RPFYWVEHEQYLLALFVMSLFANRVIRLVSQLVSDRVLIVADAVGLGLFGVLGTQLALDA
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GVPVFVSVMMGVITAAFGGLLRDVVCNEIPMLLRDNRPYATCAFLGCWLYVGLTHTSLQP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
SVAVVVATLAIVAGRLATLRWNITLPR
HHHHHHHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA