Click here to switch to the map view.

The map label for this gene is 17547058

Identifier: 17547058

GI number: 17547058

Start: 2537613

End: 2538029

Strand: Reverse

Name: 17547058

Synonym: RSc2339

Alternate gene names: NA

Gene position: 2538029-2537613 (Counterclockwise)

Preceding gene: 17547059

Following gene: 17547057

Centisome position: 68.29

GC content: 71.22

Gene sequence:

>417_bases
ATGCGTTTTTCGACTTTCACACCGCTGCGCCGCGCCGTTGCCGTTGCCGCGACGGTGGCGGCGCTCGCCGGATGCGCCTC
GACGGGCGCGTCCCGCTTCGATGTCGACTCGTTCCTGACCGCGCCCGATACGGTGCTGGCCGAGGCGCTGGTCAACAAGG
ACTTTCTGGGCGCCACCCAGCTGCCGGCCGCGGAGTGCAACGCACTGGTGAAGGGCCATGCCAGCCAGGTGGTGCCGATC
CCGGCGCCGGCCGATCCGCGCCTGCCGGAGGCTTCCGCCCGCCAGCCGTTCGTGATCCAGCCGCCGGCCAGCGAAAGCGT
CTGGCTGCTGCTGCGTTCGGCCGACGGCAAGCCGTCGTGCCACGGGCCGCTGCCGGCCAGGGAATTCATGGGCCTGGTGC
AGCGCGCAGCGAACTGA

Upstream 100 bases:

>100_bases
CGCAACTGCCGGCCAGCGCGTTCCGCTTCGTGCCGCCCAAGGGGGCCGACGTCATCAAGCAGTAACGCGACGGGGCCGGT
TTTCGACAAGGAGACCGACC

Downstream 100 bases:

>100_bases
CGTCTGCCGGCGCGACCGGCCCGGCCGGTACGGTAGCGGGCCGTGTCGCGGTTTCTGCGACAATCCCCGCATGAACGCTT
CTCTTTTCCCGGACGCGCCG

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRFSTFTPLRRAVAVAATVAALAGCASTGASRFDVDSFLTAPDTVLAEALVNKDFLGATQLPAAECNALVKGHASQVVPI
PAPADPRLPEASARQPFVIQPPASESVWLLLRSADGKPSCHGPLPAREFMGLVQRAAN

Sequences:

>Translated_138_residues
MRFSTFTPLRRAVAVAATVAALAGCASTGASRFDVDSFLTAPDTVLAEALVNKDFLGATQLPAAECNALVKGHASQVVPI
PAPADPRLPEASARQPFVIQPPASESVWLLLRSADGKPSCHGPLPAREFMGLVQRAAN
>Mature_138_residues
MRFSTFTPLRRAVAVAATVAALAGCASTGASRFDVDSFLTAPDTVLAEALVNKDFLGATQLPAAECNALVKGHASQVVPI
PAPADPRLPEASARQPFVIQPPASESVWLLLRSADGKPSCHGPLPAREFMGLVQRAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14376; Mature: 14376

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSTFTPLRRAVAVAATVAALAGCASTGASRFDVDSFLTAPDTVLAEALVNKDFLGATQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCC
LPAAECNALVKGHASQVVPIPAPADPRLPEASARQPFVIQPPASESVWLLLRSADGKPSC
CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCC
HGPLPAREFMGLVQRAAN
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRFSTFTPLRRAVAVAATVAALAGCASTGASRFDVDSFLTAPDTVLAEALVNKDFLGATQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCC
LPAAECNALVKGHASQVVPIPAPADPRLPEASARQPFVIQPPASESVWLLLRSADGKPSC
CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCC
HGPLPAREFMGLVQRAAN
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA