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The map label for this gene is xcpT [H]

Identifier: 17547029

GI number: 17547029

Start: 2510819

End: 2511286

Strand: Reverse

Name: xcpT [H]

Synonym: RSc2310

Alternate gene names: 17547029

Gene position: 2511286-2510819 (Counterclockwise)

Preceding gene: 17547031

Following gene: 17547028

Centisome position: 67.57

GC content: 66.67

Gene sequence:

>468_bases
ATGATCGGGGTCTTGCGTTGCCCACGGGATGACGGCGGCAGCGTCTTCGCACGTCGATGCGCGCGCCGGGAAGGGGGCTT
TACGCTCCTGGAGCTCCTGGTCGTGATGGTCATCATCGGGTTGCTGGCGGGCCTGGTGGCGCCGCAGTATTTCGATCAGA
TCGGCAAGTCCAACCTCAAGATCGCGAAGGCGCAGATCGAGTCGCTCGGCAAGGCGCTTGATCAGTACCGCCTCGATGTC
GGCGCGTATCCGAGCACGGAGGAAGGCCTGGACGCGCTCAACACGCGGCCGCAGAGCCAGCCGCGGTGGAGCGGCCCCTA
TCTGAAGAAGGCGGTTCCGCTCGACCCGTGGGATCGCCCGTACGTCTACCGGTCGCCCGGCGAGCACGGCGAATACGACC
TGTACTCGCTGGGCAAGAGCGGGCAGCCCGGCGGCACCGGCGAGAACGTGGCGGTCACATCGTGGTGA

Upstream 100 bases:

>100_bases
TCTTCCACCGTGATGCACAGACAAGAATGAGATCAAGCCCAGTTGGGCCGGCTGTCCCGGAGGACGGAAAGGGAGGGGCG
TCGTGGTGCTTGATACGCGA

Downstream 100 bases:

>100_bases
AGGCGCGGACCGGCTGGCCGTGAAGCCTGCGGCCGGGCCGTTAGAGGGGGCTGAGGTGAAGTACTTGCTGCGAGTCTTCG
ATTCCGGTGGCCTGGTGCAG

Product: GSPG-related transmembrane protein

Products: NA

Alternate protein names: PilD-dependent protein pddA [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAKAQIESLGKALDQYRLDV
GAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRPYVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW

Sequences:

>Translated_155_residues
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAKAQIESLGKALDQYRLDV
GAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRPYVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW
>Mature_155_residues
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAKAQIESLGKALDQYRLDV
GAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRPYVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP G family [H]

Homologues:

Organism=Escherichia coli, GI1789725, Length=141, Percent_Identity=41.8439716312057, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR013545
- InterPro:   IPR010054 [H]

Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 16970; Mature: 16970

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLK
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
IAKAQIESLGKALDQYRLDVGAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCC
YVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW
EEECCCCCCCCCHHHCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLK
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
IAKAQIESLGKALDQYRLDVGAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCC
YVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW
EEECCCCCCCCCHHHCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]