| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547021
Identifier: 17547021
GI number: 17547021
Start: 2502296
End: 2502814
Strand: Reverse
Name: 17547021
Synonym: RSc2302
Alternate gene names: NA
Gene position: 2502814-2502296 (Counterclockwise)
Preceding gene: 17547022
Following gene: 17547020
Centisome position: 67.34
GC content: 68.79
Gene sequence:
>519_bases ATGGTCCGCCTGAGGGACCTCCACCTTGGCCGTGGCCGCGCGAACTGCCGCGGCCACGGCTTCACGCTGATCGAGCTCGT CATCACGCTTGCGCTGGTGGGCATCGTCGCCATGGCCATCGTGCCGCTTTCCGAGCTGGCCGTGCAGCGCCAGAAAGAGC AGGCGCTGCGGGTGGCGCTGCGCGAGATCCGCACCGCGATCGATGCGTACAAGGAAGCGAGCGACTCGGGTTCGGTCGAG CACGAGGCGGGCGCGTCCGGCTACCCGCCGTCGCTCGCGGTGCTGGTGGAGGGCGTCAAGGACGCCAAGGACCCGAAAGG CGGCCTGCTGATGTTCCTGCGAAGGGTGCCGCGCGATCCGTTCTTCACGGGCGAGGCCTCCACGCCTGCCGCCGATACCT GGAACCTGCGCGCATACGGCGTGCCGGTGGATGGCGGGACCGGCGGCGACGACGTGTTCGATGTCACATCGAAAGCCGGC GGCACGGGTCTGGACGGCATTCCGTACAAGGACTGGTGA
Upstream 100 bases:
>100_bases GCCGCCAGCGGCATCGCCGCCGCCGATCGTGCCGACGCCGCCGAGCGACATGCCGAGCGATAACCCGTTGCATCCGATCC CGACGGGGGCGTACTGAGCC
Downstream 100 bases:
>100_bases GGCCACCATGACACAAGCACCGCACGCGCGCCGCCGCGGATTCACGCTGATCGAGCTGGTGGTGGTCATGGCCATCATCG GCTTGCTGCTGACGCTTGCG
Product: GSPG-like signal peptide protein
Products: NA
Alternate protein names: N-Terminal Methylation Site; Protein Involved In Methylation; Type II Secretory Pathway Pseudopilin PulG; Secretion Type II Protein; General Secretion Pathway Transmembrane Protein; Methylation; GSPG-Like Signal Peptide Protein; G Protein Signal Peptide-Like Secretion Type II Protein; N-Terminal Methylation; Type II Secretion System Transmembrane Protein; Type II Secretion System Protein; Type II Secretion System Pseudopilin PulG; Secretion Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MVRLRDLHLGRGRANCRGHGFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVALREIRTAIDAYKEASDSGSVE HEAGASGYPPSLAVLVEGVKDAKDPKGGLLMFLRRVPRDPFFTGEASTPAADTWNLRAYGVPVDGGTGGDDVFDVTSKAG GTGLDGIPYKDW
Sequences:
>Translated_172_residues MVRLRDLHLGRGRANCRGHGFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVALREIRTAIDAYKEASDSGSVE HEAGASGYPPSLAVLVEGVKDAKDPKGGLLMFLRRVPRDPFFTGEASTPAADTWNLRAYGVPVDGGTGGDDVFDVTSKAG GTGLDGIPYKDW >Mature_172_residues MVRLRDLHLGRGRANCRGHGFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVALREIRTAIDAYKEASDSGSVE HEAGASGYPPSLAVLVEGVKDAKDPKGGLLMFLRRVPRDPFFTGEASTPAADTWNLRAYGVPVDGGTGGDDVFDVTSKAG GTGLDGIPYKDW
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18330; Mature: 18330
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLRDLHLGRGRANCRGHGFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVAL CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIRTAIDAYKEASDSGSVEHEAGASGYPPSLAVLVEGVKDAKDPKGGLLMFLRRVPRDP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC FFTGEASTPAADTWNLRAYGVPVDGGTGGDDVFDVTSKAGGTGLDGIPYKDW CCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVRLRDLHLGRGRANCRGHGFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVAL CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIRTAIDAYKEASDSGSVEHEAGASGYPPSLAVLVEGVKDAKDPKGGLLMFLRRVPRDP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC FFTGEASTPAADTWNLRAYGVPVDGGTGGDDVFDVTSKAGGTGLDGIPYKDW CCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA