| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is hofG [C]
Identifier: 17547020
GI number: 17547020
Start: 2501896
End: 2502288
Strand: Reverse
Name: hofG [C]
Synonym: RSc2301
Alternate gene names: 17547020
Gene position: 2502288-2501896 (Counterclockwise)
Preceding gene: 17547021
Following gene: 17547019
Centisome position: 67.33
GC content: 68.19
Gene sequence:
>393_bases ATGACACAAGCACCGCACGCGCGCCGCCGCGGATTCACGCTGATCGAGCTGGTGGTGGTCATGGCCATCATCGGCTTGCT GCTGACGCTTGCGCTGCCACGCTACTTCCACAGCATCGAGCGCGGGCGGGCCCAGGTGCAGCAGCAGAATCTGGCCGTGA TCCGGGACGCGATCGACAAGTACTACGGCGACAACGGCCAGTACCCGGACACGCTGGACGATCTGGTGGCGAAGCGCTAT CTGCGCGGCATTCCGGTGGACCCGGTCAGCGGCGGTACCGCGTGGGCCGTCATTGCGCCGCCGGACACCTCGAAGACCGG CATCTACGACGTGGGCCCGGCGCGCGAAGCGGGCGTGCCGGCGGCCGCGTCCGAACCGGTGGCGGCAAAATGA
Upstream 100 bases:
>100_bases GTGGATGGCGGGACCGGCGGCGACGACGTGTTCGATGTCACATCGAAAGCCGGCGGCACGGGTCTGGACGGCATTCCGTA CAAGGACTGGTGAGGCCACC
Downstream 100 bases:
>100_bases GCGGCGCCCGGCATCGGTACCCGACGCGTCGGCCCTGGCGGCGGCAGCGCTCGCCTGGCCTGGTCATGCTTACGCTGCTG ATCGCCCTGATGCTCGCGTC
Product: GSPG-related protein
Products: NA
Alternate protein names: General Secretion Pathway Protein G; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation Site; N-Terminal Methylation; Type II Secretion System Pseudopilin OxpG; Pilin Domain-Containing Protein; Type II Secretion System Protein; Fimbrial Protein Pilin; Secretion Protein; Prokaryotic N-Terminal Methylation Site
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTQAPHARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDKYYGDNGQYPDTLDDLVAKRY LRGIPVDPVSGGTAWAVIAPPDTSKTGIYDVGPAREAGVPAAASEPVAAK
Sequences:
>Translated_130_residues MTQAPHARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDKYYGDNGQYPDTLDDLVAKRY LRGIPVDPVSGGTAWAVIAPPDTSKTGIYDVGPAREAGVPAAASEPVAAK >Mature_129_residues TQAPHARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDKYYGDNGQYPDTLDDLVAKRYL RGIPVDPVSGGTAWAVIAPPDTSKTGIYDVGPAREAGVPAAASEPVAAK
Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14025; Mature: 13894
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAPHARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDK CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYGDNGQYPDTLDDLVAKRYLRGIPVDPVSGGTAWAVIAPPDTSKTGIYDVGPAREAGVP HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCC AAASEPVAAK CCCCCCCCCC >Mature Secondary Structure TQAPHARRRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDK CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYGDNGQYPDTLDDLVAKRYLRGIPVDPVSGGTAWAVIAPPDTSKTGIYDVGPAREAGVP HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCC AAASEPVAAK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA