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The map label for this gene is 17546944

Identifier: 17546944

GI number: 17546944

Start: 2413193

End: 2414167

Strand: Direct

Name: 17546944

Synonym: RSc2225

Alternate gene names: NA

Gene position: 2413193-2414167 (Clockwise)

Preceding gene: 17546943

Following gene: 17546945

Centisome position: 64.93

GC content: 67.79

Gene sequence:

>975_bases
ATGTCGACCGACCATACCATGCCCATCGCCCAGCAGACGATCAGCTCGTCCCGACAATCGCTCTGGATGGTGCTCGCGGC
ATTCGCGTTCTCGGCAATGGGGGTCTGCGTCAAGCTGGCCTCGGCGCACTACAGCACCGGCGAGATCGTCTTCTACCGCA
GCCTGATCGGCGTGGCGCTGATGGGCGCGGTGCTGTACCACACGGGGGCCGGCGTGCGCACGCCCCACTTCGCCTCGCAT
ATCAAGCGCAGCGTGTTCGGCGTGACCTCGCTGCTGCTGTGGTTCAGCTCGATCAGCCTGCTGCCGCTGGCCACCGCCAT
GACGCTCAACTACATGTCGCCGGTGTGGATCGCGCTCATCATCGGCGCGGGCGCCACGCTGGCCGGCAAGGCCGGCGGGG
CCGACCGCAAGATGGTCACGGCGATCCTGATGTCGTTCGTCGGCGTGATCTGCCTGCTGCAGCCGAGCGTGGGCCCCTCG
CAGATGACCGGCGGCATGATCGGACTGGTGTCGGGCGTGTTCACGGCGCTGGCCTACGTGGAAGTCCGCCAGCTGGGCGA
CCTGGGCGAGAACGAGGCGCGCATCGTCTTCTATTTCTCGCTGGTCAGCTCGATCGCCGGCGGCGCGTGGATGCTGATCG
CCGGCGCGCACGCGCACACCTGGCAGAGCGCCTGGCTGCTGGTGGCCGTGGGCCTGCTGGCCACGCTCGGCCAGACCGCC
ATGACGCGGGCCTACAAGCGCGGCAACACGCTGCTGACTGCCAACCTCCAGTACACCGGCATCGTCTTTGCGAGCGGATG
GGGCATGCTGCTGTGGCACGATCACCTCAACGCGCTGTCGTGGATGGGCATGGCGCTCATCATCGGCAGCGGCATCGTCA
CCACGGTCATGCGCGCGCGCCAGTCGGGCGTTGCGCATCCGACACCGCAGACCGCCGTGTCGGGGCCGGAAGCCGAGATC
CACCCGGAAGTCTGA

Upstream 100 bases:

>100_bases
TGATCCGTCCGCCGCGGCACTGCTGGCGCCCAAGCGCCAACGGAGTGACAATGCAAACGGTGCACGCGCGCGGCGTGCAC
CGTTTTTTTTCGCCCCGCCC

Downstream 100 bases:

>100_bases
TTCCGACTCTTCGATCCAGGAGATTGCCTATGAGCGAACGCGCACCCCGCTATGCCACGCTGATCACCGCACCCCAGCTC
GCCGCGCTGCAGCAGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSTDHTMPIAQQTISSSRQSLWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSLIGVALMGAVLYHTGAGVRTPHFASH
IKRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALIIGAGATLAGKAGGADRKMVTAILMSFVGVICLLQPSVGPS
QMTGGMIGLVSGVFTALAYVEVRQLGDLGENEARIVFYFSLVSSIAGGAWMLIAGAHAHTWQSAWLLVAVGLLATLGQTA
MTRAYKRGNTLLTANLQYTGIVFASGWGMLLWHDHLNALSWMGMALIIGSGIVTTVMRARQSGVAHPTPQTAVSGPEAEI
HPEV

Sequences:

>Translated_324_residues
MSTDHTMPIAQQTISSSRQSLWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSLIGVALMGAVLYHTGAGVRTPHFASH
IKRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALIIGAGATLAGKAGGADRKMVTAILMSFVGVICLLQPSVGPS
QMTGGMIGLVSGVFTALAYVEVRQLGDLGENEARIVFYFSLVSSIAGGAWMLIAGAHAHTWQSAWLLVAVGLLATLGQTA
MTRAYKRGNTLLTANLQYTGIVFASGWGMLLWHDHLNALSWMGMALIIGSGIVTTVMRARQSGVAHPTPQTAVSGPEAEI
HPEV
>Mature_323_residues
STDHTMPIAQQTISSSRQSLWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSLIGVALMGAVLYHTGAGVRTPHFASHI
KRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALIIGAGATLAGKAGGADRKMVTAILMSFVGVICLLQPSVGPSQ
MTGGMIGLVSGVFTALAYVEVRQLGDLGENEARIVFYFSLVSSIAGGAWMLIAGAHAHTWQSAWLLVAVGLLATLGQTAM
TRAYKRGNTLLTANLQYTGIVFASGWGMLLWHDHLNALSWMGMALIIGSGIVTTVMRARQSGVAHPTPQTAVSGPEAEIH
PEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34270; Mature: 34138

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDHTMPIAQQTISSSRQSLWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSLIGVAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
MGAVLYHTGAGVRTPHFASHIKRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAGATLAGKAGGADRKMVTAILMSFVGVICLLQPSVGPSQMTGGMIGLVSGVFTALAYV
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHH
EVRQLGDLGENEARIVFYFSLVSSIAGGAWMLIAGAHAHTWQSAWLLVAVGLLATLGQTA
HHHHHHCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
MTRAYKRGNTLLTANLQYTGIVFASGWGMLLWHDHLNALSWMGMALIIGSGIVTTVMRAR
HHHHHHCCCEEEEEECEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHH
QSGVAHPTPQTAVSGPEAEIHPEV
HCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STDHTMPIAQQTISSSRQSLWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSLIGVAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
MGAVLYHTGAGVRTPHFASHIKRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAGATLAGKAGGADRKMVTAILMSFVGVICLLQPSVGPSQMTGGMIGLVSGVFTALAYV
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHH
EVRQLGDLGENEARIVFYFSLVSSIAGGAWMLIAGAHAHTWQSAWLLVAVGLLATLGQTA
HHHHHHCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
MTRAYKRGNTLLTANLQYTGIVFASGWGMLLWHDHLNALSWMGMALIIGSGIVTTVMRAR
HHHHHHCCCEEEEEECEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHH
QSGVAHPTPQTAVSGPEAEIHPEV
HCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]