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The map label for this gene is yeaW [H]

Identifier: 17546943

GI number: 17546943

Start: 2411998

End: 2413095

Strand: Direct

Name: yeaW [H]

Synonym: RSc2224

Alternate gene names: 17546943

Gene position: 2411998-2413095 (Clockwise)

Preceding gene: 17546938

Following gene: 17546944

Centisome position: 64.9

GC content: 64.03

Gene sequence:

>1098_bases
ATGTCCAATCTCAGCACCGCGCTGAATCTGGTGCCGTCTGAAACCCAGCTGCCCGTCTCCGCATACTTCGACGAGGCGCT
GTACCAAACCGAAATCGAACGTCTGTTCAAGCATGGCCCGAGCTACGTCGGCCATGAGCTGATGGTGCCCGAGGTGGGCG
ACTATCACACGCTTGCCGCCGAGGCCGAAGGCCGCGTGCTGGTACGCAATCCGAACGGCGTCGAACTGCTATCCAACGTA
TGCCGGCATCGCCAGGCGATCATGCTCAATGGGCGGGGCAATGCCCAGAACATCGTCTGCCCGCTGCACCGCTGGACATA
CGACCTGAAGGGCGAACTGCTGGGCGCGCCGCATTTCGAGCGGCAGCCGTGCGTGCACCTGTCGCGCTCGCTGCTGCAGA
ACTGGAACGGCCTGCTGTTCGAGGGCAAGCGCGACGTGCGCAACGACCTCGCCCGCCTGGGCGTGGCGCGCGACCTCGAC
TTCTCCGGCTACATGCTCGACCACGTCGAGGTGCACGACTGCGACTACAACTGGAAGACCTTCATCGAGGTCTACCTGGA
GGACTACCACGTCGTGCCCTTCCACCCCGGCCTCGGCCAGTTCGTCTCGTGCGACGACCTGACCTGGGAATTCGGCGAGT
GGTACAGCGTGCAGACGGTCGGCATCCACGCCGGCCTGCGCAAGCCCGGCACGGCGACCTACCAGAAGTGGCATGACGCC
GTGCTGCGCTTCAACAACGGCGAGATGCCCAAGTACGGCGCGGTATGGCTGACGTACTACCCGAACGTGATGGTGGAGTG
GTACCCGAACGTCCTGGTGGTCTCGACCCTGCATCCGATGGGCCCGGGCAAGACCCGCAACGTGGTCGAGTTCTATTACC
CGGAAGAAATCGTGCTGTTCGAGCGCGAATTCGTCGAGGCCGAGCGCGCCGCCTACATGGAGACCTGCATCGAGGACGAC
GAGATCGCCGAGCGCATGGATGCCGGCCGGCTGGCCCTGCTCAGGCGCGGCACCAGCGAGGTCGGGCCTTACCAGTCGCC
GATGGAAGACGGCATGCAGCATTTCCACGAGTGGTACCGCCGCGTGATGGACTATTGA

Upstream 100 bases:

>100_bases
CGCACGGCGGCCATGCCGCCCGCCGATGGCGTTCTTTCCCATATCGATTTTTCGATGGTTGGGTTGTTCACTGCTTTCAC
CGTTCTTGGGAGTGGGGATA

Downstream 100 bases:

>100_bases
TCCGTCCGCCGCGGCACTGCTGGCGCCCAAGCGCCAACGGAGTGACAATGCAAACGGTGCACGCGCGCGGCGTGCACCGT
TTTTTTTCGCCCCGCCCATG

Product: dioxygenase alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSNLSTALNLVPSETQLPVSAYFDEALYQTEIERLFKHGPSYVGHELMVPEVGDYHTLAAEAEGRVLVRNPNGVELLSNV
CRHRQAIMLNGRGNAQNIVCPLHRWTYDLKGELLGAPHFERQPCVHLSRSLLQNWNGLLFEGKRDVRNDLARLGVARDLD
FSGYMLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGQFVSCDDLTWEFGEWYSVQTVGIHAGLRKPGTATYQKWHDA
VLRFNNGEMPKYGAVWLTYYPNVMVEWYPNVLVVSTLHPMGPGKTRNVVEFYYPEEIVLFEREFVEAERAAYMETCIEDD
EIAERMDAGRLALLRRGTSEVGPYQSPMEDGMQHFHEWYRRVMDY

Sequences:

>Translated_365_residues
MSNLSTALNLVPSETQLPVSAYFDEALYQTEIERLFKHGPSYVGHELMVPEVGDYHTLAAEAEGRVLVRNPNGVELLSNV
CRHRQAIMLNGRGNAQNIVCPLHRWTYDLKGELLGAPHFERQPCVHLSRSLLQNWNGLLFEGKRDVRNDLARLGVARDLD
FSGYMLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGQFVSCDDLTWEFGEWYSVQTVGIHAGLRKPGTATYQKWHDA
VLRFNNGEMPKYGAVWLTYYPNVMVEWYPNVLVVSTLHPMGPGKTRNVVEFYYPEEIVLFEREFVEAERAAYMETCIEDD
EIAERMDAGRLALLRRGTSEVGPYQSPMEDGMQHFHEWYRRVMDY
>Mature_364_residues
SNLSTALNLVPSETQLPVSAYFDEALYQTEIERLFKHGPSYVGHELMVPEVGDYHTLAAEAEGRVLVRNPNGVELLSNVC
RHRQAIMLNGRGNAQNIVCPLHRWTYDLKGELLGAPHFERQPCVHLSRSLLQNWNGLLFEGKRDVRNDLARLGVARDLDF
SGYMLDHVEVHDCDYNWKTFIEVYLEDYHVVPFHPGLGQFVSCDDLTWEFGEWYSVQTVGIHAGLRKPGTATYQKWHDAV
LRFNNGEMPKYGAVWLTYYPNVMVEWYPNVLVVSTLHPMGPGKTRNVVEFYYPEEIVLFEREFVEAERAAYMETCIEDDE
IAERMDAGRLALLRRGTSEVGPYQSPMEDGMQHFHEWYRRVMDY

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=398, Percent_Identity=26.1306532663317, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1788888, Length=206, Percent_Identity=27.6699029126214, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42216; Mature: 42085

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSTALNLVPSETQLPVSAYFDEALYQTEIERLFKHGPSYVGHELMVPEVGDYHTLAA
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEE
EAEGRVLVRNPNGVELLSNVCRHRQAIMLNGRGNAQNIVCPLHRWTYDLKGELLGAPHFE
CCCCEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCEEECHHHCCEECCCCEECCCCCC
RQPCVHLSRSLLQNWNGLLFEGKRDVRNDLARLGVARDLDFSGYMLDHVEVHDCDYNWKT
CCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEECEEEECCCCCHHH
FIEVYLEDYHVVPFHPGLGQFVSCDDLTWEFGEWYSVQTVGIHAGLRKPGTATYQKWHDA
HHHHHHHCEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH
VLRFNNGEMPKYGAVWLTYYPNVMVEWYPNVLVVSTLHPMGPGKTRNVVEFYYPEEIVLF
HEEECCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCEEEEH
EREFVEAERAAYMETCIEDDEIAERMDAGRLALLRRGTSEVGPYQSPMEDGMQHFHEWYR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RVMDY
HHHCC
>Mature Secondary Structure 
SNLSTALNLVPSETQLPVSAYFDEALYQTEIERLFKHGPSYVGHELMVPEVGDYHTLAA
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEE
EAEGRVLVRNPNGVELLSNVCRHRQAIMLNGRGNAQNIVCPLHRWTYDLKGELLGAPHFE
CCCCEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCEEECHHHCCEECCCCEECCCCCC
RQPCVHLSRSLLQNWNGLLFEGKRDVRNDLARLGVARDLDFSGYMLDHVEVHDCDYNWKT
CCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEECEEEECCCCCHHH
FIEVYLEDYHVVPFHPGLGQFVSCDDLTWEFGEWYSVQTVGIHAGLRKPGTATYQKWHDA
HHHHHHHCEEEEECCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH
VLRFNNGEMPKYGAVWLTYYPNVMVEWYPNVLVVSTLHPMGPGKTRNVVEFYYPEEIVLF
HEEECCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCEEEEH
EREFVEAERAAYMETCIEDDEIAERMDAGRLALLRRGTSEVGPYQSPMEDGMQHFHEWYR
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
RVMDY
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]